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| author | Johann Visagie <wjv@FreeBSD.org> | 2001-07-04 13:22:13 +0000 |
|---|---|---|
| committer | Johann Visagie <wjv@FreeBSD.org> | 2001-07-04 13:22:13 +0000 |
| commit | b4e642da75ed93f63fa8c58bd63408787bce745b (patch) | |
| tree | 6aa8381eb7208601ea5bbb56fa8b78bfe4e000be | |
| parent | 819158bfa4572bec31287fd4ff8984d24caa97bd (diff) | |
| download | ports-b4e642da75ed93f63fa8c58bd63408787bce745b.tar.gz ports-b4e642da75ed93f63fa8c58bd63408787bce745b.zip | |
Notes
| -rw-r--r-- | biology/p5-bioperl/Makefile | 8 | ||||
| -rw-r--r-- | biology/p5-bioperl/distinfo | 2 | ||||
| -rw-r--r-- | biology/p5-bioperl/files/ext.msg | 16 | ||||
| -rw-r--r-- | biology/p5-bioperl/pkg-plist | 1 |
4 files changed, 24 insertions, 3 deletions
diff --git a/biology/p5-bioperl/Makefile b/biology/p5-bioperl/Makefile index 59fb85f02cfb..650a028aa69c 100644 --- a/biology/p5-bioperl/Makefile +++ b/biology/p5-bioperl/Makefile @@ -6,7 +6,7 @@ # PORTNAME= bioperl -PORTVERSION= 0.7.0 +PORTVERSION= 0.7.1 CATEGORIES= biology perl5 MASTER_SITES= ftp://bioperl.org/pub/DIST/ \ http://bioperl.org/Core/Latest/ \ @@ -140,6 +140,12 @@ MAN3+= Bio::Tk::HitDisplay.3 Bio::Tk::SeqCanvas.3 .endif MANPREFIX= ${PREFIX}/lib/perl5/${PERL_VERSION} +pre-fetch: +.if !defined(BATCH) && (!defined(WITH_CORBA_CLIENT) || \ + !defined(WITH_CORBA_SERVER) || !defined(WITH_GUI)) + @ ${CAT} ${FILESDIR}/ext.msg +.endif + post-configure: @ cd ${EXT_WRKSRC} && \ ${SETENV} ${CONFIGURE_ENV} \ diff --git a/biology/p5-bioperl/distinfo b/biology/p5-bioperl/distinfo index d21690e7523e..ef9d77ceb670 100644 --- a/biology/p5-bioperl/distinfo +++ b/biology/p5-bioperl/distinfo @@ -1,4 +1,4 @@ -MD5 (bioperl-0.7.0.tar.gz) = 10b4d196346495fdd6f4337bac115776 +MD5 (bioperl-0.7.1.tar.gz) = 9f8cef11102b79418907e3a1b8532f8f MD5 (bioperl-ext-0.6.tar.gz) = 5bf87e0cf94d3d41fabbfd209971d240 MD5 (bioperl-corba-client-0.2.tar.gz) = 9635488e779d771bc5f976bf56826590 MD5 (bioperl-corba-server-0.2.tar.gz) = d5e3353ed6c8717de06e0db8f5bbc0f5 diff --git a/biology/p5-bioperl/files/ext.msg b/biology/p5-bioperl/files/ext.msg new file mode 100644 index 000000000000..1ba9af2f5f84 --- /dev/null +++ b/biology/p5-bioperl/files/ext.msg @@ -0,0 +1,16 @@ +--------------------------------------------------------------------------- +This port includes support for a number of optional extensions to Bioperl. +To build the port with these extensions, set the corresponding variables: + +To build with client-side CORBA support: set WITH_CORBA_CLIENT +To build with server-side CORBA support: set WITH_CORBA_SERVER +To build with (experimental) GUI support: set WITH_GUI + +Additionally, the variable WITH_CORBA implies both WITH_CORBA_CLIENT and +WITH_CORBA_SERVER. + +For example, to build and install the Bioperl port with all the currently +available optional extensions: + + make WITH_CORBA=yes WITH_GUI=yes install +--------------------------------------------------------------------------- diff --git a/biology/p5-bioperl/pkg-plist b/biology/p5-bioperl/pkg-plist index 30fa55f0a56b..3c0b78e2315d 100644 --- a/biology/p5-bioperl/pkg-plist +++ b/biology/p5-bioperl/pkg-plist @@ -146,7 +146,6 @@ lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/game/seqHandler.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/gcg.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/genbank.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/largefasta.pm -lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/pir.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/raw.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/scf.pm lib/perl5/site_perl/%%PERL_VER%%/Bio/SeqIO/swiss.pm |