3 files changed, 0 insertions, 58 deletions

diff --git a/biology/ariadne/Makefile b/biology/ariadne/Makefile
deleted file mode 100644
index 3ce04c057ed9..000000000000
--- a/biology/ariadne/Makefile
+++ /dev/null
@@ -1,38 +0,0 @@
-# Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
-# $FreeBSD$
-
-PORTNAME=	ariadne
-PORTVERSION=	1.3
-CATEGORIES=	biology
-MASTER_SITES=	http://www.well.ox.ac.uk/ariadne/
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	Programs to compare protein sequences and profiles
-
-WRKSRC=		${WRKDIR}/SRC-${PORTVERSION}
-
-BROKEN=		No public distfiles
-DEPRECATED=	Broken for more than 6 months
-EXPIRATION_DATE=	2018-06-06
-
-PLIST_FILES+=	bin/ariadne bin/prospero
-USES=		gmake tar:Z
-PORTDOCS=	README
-MAKE_ARGS+=	CC="${CC}"
-
-OPTIONS_DEFINE=	DOCS
-
-MAKE_JOBS_UNSAFE=	yes
-
-post-patch:
-	@${REINPLACE_CMD} -e 's|CFLAGS =|CFLAGS +=| ; \
-		s|-c $$(OPTIMISE)|-c ${CFLAGS} ${OPTIMIZE}|g' \
-		${WRKSRC}/Makefile
-
-do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/${OPSYS}/ariadne ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_PROGRAM} ${WRKSRC}/${OPSYS}/prospero ${STAGEDIR}${PREFIX}/bin
-	@${MKDIR} ${STAGEDIR}${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/README ${STAGEDIR}${DOCSDIR}
-
-.include <bsd.port.mk>
diff --git a/biology/ariadne/distinfo b/biology/ariadne/distinfo
deleted file mode 100644
index f68ade35372a..000000000000
--- a/biology/ariadne/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (ariadne-1.3.tar.Z) = 8b6b0acb6e8d02b1303d94b20906bf2bf1dee3de4eceeb1b927cfba7a96fd00d
-SIZE (ariadne-1.3.tar.Z) = 69427
diff --git a/biology/ariadne/pkg-descr b/biology/ariadne/pkg-descr
deleted file mode 100644
index e7566af34e4d..000000000000
--- a/biology/ariadne/pkg-descr
+++ /dev/null
@@ -1,18 +0,0 @@
-ARIADNE is a package of two programs, ariadne and prospero, that compare
-protein sequences and profiles using the Smith-Waterman algorithm, and
-assesses statistical significance using a new accurate formula,
-described in Mott, 2000, "Accurate Formula for P-values of gapped local
-sequence and profile alignments" J. Mol Biol. 300:649-659.
-
-The sequence/profile comparison algorithms used in ARIADNE are standard,
-and are probably not the fastest implementations available. The novel
-part is the method for determining statistical significance, which will
-give thresholds of significance that are accurate to within 5% 95% of
-the time.
-
-The package is written in ANSI C. You are free to incorporate the method
-used for assessing statistical significance into third-party code,
-provided you cite the above reference. The routines for assessing
-significance are all in gaplib.c
-
-WWW: http://www.well.ox.ac.uk/ariadne/