5 files changed, 58 insertions, 0 deletions

diff --git a/biology/crimap/Makefile b/biology/crimap/Makefile
new file mode 100644
index 000000000000..e5ecc9ad9857
--- /dev/null
+++ b/biology/crimap/Makefile
@@ -0,0 +1,40 @@
+# New ports collection makefile for:	crimap
+# Date created:				4 December 2001
+# Whom:					Tony Maher <tonym@biolateral.com.au>
+#
+# $FreeBSD$
+#
+
+PORTNAME=	crimap
+PORTVERSION=	2.4
+CATEGORIES=	biology
+MASTER_SITES=	http://compgen.rutgers.edu/multimap/crimap/
+DISTNAME=	${PORTNAME}.source
+EXTRACT_SUFX=	.tar.Z
+
+MAINTAINER=	tonym@biolateral.com.au
+
+NO_WRKSUBDIR=	true
+
+PROGRAMS=	crimap
+EXAMPLES=	chr7a.gen demo.dat
+
+do-build:
+	cd ${WRKSRC}; \
+	cc -O -o crimap *.c -lm
+
+do-install:
+.for file in ${PROGRAMS}
+	${INSTALL_PROGRAM} ${WRKSRC}/${file} ${PREFIX}/bin
+.endfor
+.if !defined(NOPORTDOCS)
+	@${MKDIR} ${EXAMPLESDIR}
+	@${MKDIR} ${DOCSDIR}
+	${CAT} ${WRKSRC}/progdoc_v2.4 | tbl | eqn -Tlatin1 | nroff -ms -t \
+		> ${DOCSDIR}/progdoc_v2.4
+.for file in ${EXAMPLES}
+	${INSTALL_DATA} ${WRKSRC}/${file} ${EXAMPLESDIR}
+.endfor
+.endif
+
+.include <bsd.port.mk>
diff --git a/biology/crimap/distinfo b/biology/crimap/distinfo
new file mode 100644
index 000000000000..8738c53c87e8
--- /dev/null
+++ b/biology/crimap/distinfo
@@ -0,0 +1 @@
+MD5 (crimap.source.tar.Z) = bd5b445901feb9c1aa3c2926a3dc7353
diff --git a/biology/crimap/pkg-comment b/biology/crimap/pkg-comment
new file mode 100644
index 000000000000..3ce04b017c81
--- /dev/null
+++ b/biology/crimap/pkg-comment
@@ -0,0 +1 @@
+Creation of multilocus linkage maps
diff --git a/biology/crimap/pkg-descr b/biology/crimap/pkg-descr
new file mode 100644
index 000000000000..8af40b581095
--- /dev/null
+++ b/biology/crimap/pkg-descr
@@ -0,0 +1,10 @@
+"The main purpose of CRI-MAP is to allow rapid, largely automated
+construction of multilocus linkage maps (and facilitate the attendant
+tasks of assessing support relative to alternative locus orders,
+generating LOD tables, and detecting data errors)."
+- from the documentation
+
+WWW: http://compgen.rutgers.edu/multimap/crimap/
+
+--
+Tony Maher <tonym@biolateral.com.au>
diff --git a/biology/crimap/pkg-plist b/biology/crimap/pkg-plist
new file mode 100644
index 000000000000..cd57f6bcc5ff
--- /dev/null
+++ b/biology/crimap/pkg-plist
@@ -0,0 +1,6 @@
+bin/crimap
+%%PORTDOCS%%share/doc/crimap/progdoc_v2.4
+%%PORTDOCS%%share/examples/crimap/chr7a.gen
+%%PORTDOCS%%share/examples/crimap/demo.dat
+%%PORTDOCS%%@dirrm share/doc/crimap
+%%PORTDOCS%%@dirrm share/examples/crimap