1 files changed, 17 insertions, 15 deletions

diff --git a/biology/emboss/files/patch-aa b/biology/emboss/files/patch-aa
index 4289821e32b0..f4b1bc46f7a1 100644
--- a/biology/emboss/files/patch-aa
+++ b/biology/emboss/files/patch-aa
@@ -1,24 +1,26 @@
-Add ${PREFIX}/etc as an acceptable location for emboss.default.  (This should
-be incorporated into the next version of EMBOSS.)
+Add ${PREFIX}/etc as an acceptable location for emboss.default.  (I'm still
+waiting for this to be incorporated into an official release of EMBOSS.)
 
 The port installs ${PREFIX}/etc/emboss.default.sample
 
 -- Johann <johann@egenetics.com>
 
 
---- ajax/ajnam.c.orig	Wed Aug  2 10:18:59 2000
-+++ ajax/ajnam.c	Thu Aug 10 10:06:20 2000
-@@ -982,6 +982,13 @@
-     prefixRootFile = fopen (ajStrStr(namRootStr), "r");
-   }
+--- ajax/ajnam.c.orig	Thu Aug 17 20:31:30 2000
++++ ajax/ajnam.c	Mon Aug 28 15:12:09 2000
+@@ -984,6 +984,15 @@
+ 	prefixRootFile = fopen (ajStrStr(namRootStr), "r");
+     }
  
-+  /* look for $(PREFIX)_ROOT/../emboss.default */
++    /* look for $(PREFIX)_ROOT/../emboss.default */
 +
-+  if (!prefixRootFile) {
-+    ajFmtPrintS (&namRootStr, "%s/etc/%s.default", prefixRoot, prefix);
-+    prefixRootFile = fopen (ajStrStr(namRootStr), "r");
-+  }
++    if (!prefixRootFile)
++    {
++      ajFmtPrintS (&namRootStr, "%s/etc/%s.default",
++		   namInstallRoot, prefixCap, prefix);
++      prefixRootFile = fopen (ajStrStr(namRootStr), "r");
++    }
 +
-   if (namFileOrig)
-     (void) ajStrAppC (&namFileOrig, ", ");
-   (void) ajStrApp (&namFileOrig, namRootStr);
+     if (namFileOrig)
+ 	(void) ajStrAppC (&namFileOrig, ", ");
+     (void) ajStrApp (&namFileOrig, namRootStr);