Add emboss, the European Molecular Biology Open Software Suite

PR:		ports/20317
Submitted by:	Johann Visagie <johann@egenetics.com>

1 files changed, 656 insertions, 0 deletions

diff --git a/biology/emboss/pkg-plist b/biology/emboss/pkg-plist
new file mode 100644
index 000000000000..0f02fc997526
--- /dev/null
+++ b/biology/emboss/pkg-plist
@@ -0,0 +1,656 @@
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+bin/antigenic
+bin/backtranseq
+bin/banana
+bin/chaos
+bin/checktrans
+bin/chips
+bin/cirdna
+bin/codcmp
+bin/complex
+bin/compseq
+bin/cpgplot
+bin/cpgreport
+bin/cusp
+bin/cutseq
+bin/dan
+bin/dbiblast
+bin/dbiflat
+bin/dbigcg
+bin/descseq
+bin/digest
+bin/dotmatcher
+bin/dottup
+bin/dreg
+bin/einverted
+bin/embossdata
+bin/emma
+bin/equicktandem
+bin/est2genome
+bin/etandem
+bin/extractseq
+bin/findkm
+bin/freak
+bin/fuzznuc
+bin/fuzzpro
+bin/fuzztran
+bin/garnier
+bin/geecee
+bin/getorf
+bin/helixturnhelix
+bin/iep
+bin/infoseq
+bin/isochore
+bin/lindna
+bin/maskfeat
+bin/maskseq
+bin/matcher
+bin/merger
+bin/msbar
+bin/needle
+bin/newcpgreport
+bin/newcpgseek
+bin/newseq
+bin/noreturn
+bin/nthseq
+bin/octanol
+bin/oddcomp
+bin/palindrome
+bin/pasteseq
+bin/patmatdb
+bin/patmatmotifs
+bin/pepcoil
+bin/pepinfo
+bin/pepnet
+bin/pepstats
+bin/pepwheel
+bin/pepwindow
+bin/pepwindowall
+bin/plotorf
+bin/polydot
+bin/preg
+bin/prettyplot
+bin/prettyseq
+bin/prima
+bin/printsextract
+bin/profit
+bin/prophecy
+bin/prophet
+bin/prosextract
+bin/pscan
+bin/rebaseextract
+bin/redata
+bin/remap
+bin/restrict
+bin/revseq
+bin/seealso
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+bin/seqret
+bin/seqretall
+bin/seqretset
+bin/seqretsplit
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+bin/shuffleseq
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+bin/supermatcher
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+bin/water
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+bin/wossname
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+@dirrm share/EMBOSS/data/CODONS
+@dirrm share/EMBOSS/data/REBASE
+@dirrm share/EMBOSS/data/PRINTS
+@dirrm share/EMBOSS/data/PROSITE
+@dirrm share/EMBOSS/data
+@dirrm share/EMBOSS/acd
+@dirrm share/EMBOSS/test/data
+@dirrm share/EMBOSS/test/embl
+@dirrm share/EMBOSS/test/pir
+@dirrm share/EMBOSS/test/swiss
+@dirrm share/EMBOSS/test/swnew
+@dirrm share/EMBOSS/test/wormpep
+@dirrm share/EMBOSS/test
+@dirrm share/EMBOSS