- update to 4.5.3

- remove version from pkg-descr

PR:		65972
Submitted by:	maintainer

1 files changed, 199 insertions, 4 deletions

diff --git a/biology/nab/pkg-plist b/biology/nab/pkg-plist
index 388373ba5080..f887aca3aab6 100644
--- a/biology/nab/pkg-plist
+++ b/biology/nab/pkg-plist
@@ -9,10 +9,6 @@ bin/transform
 bin/tss_init
 bin/tss_main
 bin/tss_next
-include/defreal.h
-include/nab.h
-include/nabcode.h
-include/nabtypes.h
 lib/cifparse.a
 lib/libnab.a
 lib/libsym.a
@@ -46,6 +42,200 @@ share/nab/dgdb/trna.stack.db
 share/nab/dgdb/zdna.basepair.db
 share/nab/dgdb/zdna.nucleotide.db
 share/nab/dgdb/zdna.stack.db
+share/nab/dgdb/basepairs/aa.I.pdb
+share/nab/dgdb/basepairs/aa.II.pdb
+share/nab/dgdb/basepairs/aa.V.pdb
+share/nab/dgdb/basepairs/aa.Va.pdb
+share/nab/dgdb/basepairs/ac.XXV.pdb
+share/nab/dgdb/basepairs/ac.XXVI.pdb
+share/nab/dgdb/basepairs/ag.IX.pdb
+share/nab/dgdb/basepairs/ag.VIII.pdb
+share/nab/dgdb/basepairs/ag.X.pdb
+share/nab/dgdb/basepairs/ag.XI.pdb
+share/nab/dgdb/basepairs/at.XX.pdb
+share/nab/dgdb/basepairs/at.XXI.pdb
+share/nab/dgdb/basepairs/at.XXIII.pdb
+share/nab/dgdb/basepairs/at.XXIV.pdb
+share/nab/dgdb/basepairs/au.XX.pdb
+share/nab/dgdb/basepairs/au.XXI.pdb
+share/nab/dgdb/basepairs/au.XXIII.pdb
+share/nab/dgdb/basepairs/au.XXIV.pdb
+share/nab/dgdb/basepairs/ca.XXV.pdb
+share/nab/dgdb/basepairs/ca.XXVI.pdb
+share/nab/dgdb/basepairs/cc.XIV.pdb
+share/nab/dgdb/basepairs/cc.XV.pdb
+share/nab/dgdb/basepairs/cg.XIX.pdb
+share/nab/dgdb/basepairs/cg.XXII.pdb
+share/nab/dgdb/basepairs/ct.XVII.pdb
+share/nab/dgdb/basepairs/ct.XVIII.pdb
+share/nab/dgdb/basepairs/cu.XVII.pdb
+share/nab/dgdb/basepairs/cu.XVIII.pdb
+share/nab/dgdb/basepairs/CVS/Entries
+share/nab/dgdb/basepairs/CVS/Repository
+share/nab/dgdb/basepairs/CVS/Root
+share/nab/dgdb/basepairs/ga.IX.pdb
+share/nab/dgdb/basepairs/ga.VIII.pdb
+share/nab/dgdb/basepairs/ga.X.pdb
+share/nab/dgdb/basepairs/ga.XI.pdb
+share/nab/dgdb/basepairs/gc.XIX.pdb
+share/nab/dgdb/basepairs/gc.XXII.pdb
+share/nab/dgdb/basepairs/gg.III.pdb
+share/nab/dgdb/basepairs/gg.IV.pdb
+share/nab/dgdb/basepairs/gg.VI.pdb
+share/nab/dgdb/basepairs/gg.VIa.pdb
+share/nab/dgdb/basepairs/gg.VII.pdb
+share/nab/dgdb/basepairs/gg.VIIa.pdb
+share/nab/dgdb/basepairs/gt.XXVII.pdb
+share/nab/dgdb/basepairs/gt.XXVIII.pdb
+share/nab/dgdb/basepairs/gu.XXVII.pdb
+share/nab/dgdb/basepairs/gu.XXVIII.pdb
+share/nab/dgdb/basepairs/ta.XX.pdb
+share/nab/dgdb/basepairs/ta.XXI.pdb
+share/nab/dgdb/basepairs/ta.XXIII.pdb
+share/nab/dgdb/basepairs/ta.XXIV.pdb
+share/nab/dgdb/basepairs/tc.XVII.pdb
+share/nab/dgdb/basepairs/tc.XVIII.pdb
+share/nab/dgdb/basepairs/tg.XXVII.pdb
+share/nab/dgdb/basepairs/tg.XXVIII.pdb
+share/nab/dgdb/basepairs/tt.XII.pdb
+share/nab/dgdb/basepairs/tt.XIII.pdb
+share/nab/dgdb/basepairs/tt.XVI.pdb
+share/nab/dgdb/basepairs/tt.XVIa.pdb
+share/nab/dgdb/basepairs/tu.XII.pdb
+share/nab/dgdb/basepairs/tu.XIII.pdb
+share/nab/dgdb/basepairs/tu.XVI.pdb
+share/nab/dgdb/basepairs/ua.XX.pdb
+share/nab/dgdb/basepairs/ua.XXI.pdb
+share/nab/dgdb/basepairs/ua.XXIII.pdb
+share/nab/dgdb/basepairs/ua.XXIV.pdb
+share/nab/dgdb/basepairs/uc.XVII.pdb
+share/nab/dgdb/basepairs/uc.XVIII.pdb
+share/nab/dgdb/basepairs/ug.XXVII.pdb
+share/nab/dgdb/basepairs/ug.XXVIII.pdb
+share/nab/dgdb/basepairs/ut.XII.pdb
+share/nab/dgdb/basepairs/ut.XIII.pdb
+share/nab/dgdb/basepairs/ut.XVI.pdb
+share/nab/dgdb/basepairs/uu.XII.pdb
+share/nab/dgdb/basepairs/uu.XIII.pdb
+share/nab/dgdb/basepairs/uu.XVI.pdb
+share/nab/dgdb/basepairs/uu.XVIa.pdb
+share/nab/dgdb/stacking/aa.a-rna.pdb
+share/nab/dgdb/stacking/aa.adna.pdb
+share/nab/dgdb/stacking/aa.arna.pdb
+share/nab/dgdb/stacking/aa.bdna.pdb
+share/nab/dgdb/stacking/aa.cdna.pdb
+share/nab/dgdb/stacking/aa.ddna.pdb
+share/nab/dgdb/stacking/aa.tdna.pdb
+share/nab/dgdb/stacking/ac.a-rna.pdb
+share/nab/dgdb/stacking/ac.adna.pdb
+share/nab/dgdb/stacking/ac.arna.pdb
+share/nab/dgdb/stacking/ac.bdna.pdb
+share/nab/dgdb/stacking/ac.cdna.pdb
+share/nab/dgdb/stacking/ac.ddna.pdb
+share/nab/dgdb/stacking/ac.tdna.pdb
+share/nab/dgdb/stacking/ag.a-rna.pdb
+share/nab/dgdb/stacking/ag.adna.pdb
+share/nab/dgdb/stacking/ag.arna.pdb
+share/nab/dgdb/stacking/ag.bdna.pdb
+share/nab/dgdb/stacking/ag.cdna.pdb
+share/nab/dgdb/stacking/ag.ddna.pdb
+share/nab/dgdb/stacking/ag.tdna.pdb
+share/nab/dgdb/stacking/at.adna.pdb
+share/nab/dgdb/stacking/at.bdna.pdb
+share/nab/dgdb/stacking/CVS/Entries
+share/nab/dgdb/stacking/CVS/Repository
+share/nab/dgdb/stacking/CVS/Root
+share/nab/dgdb/stacking/at.cdna.pdb
+share/nab/dgdb/stacking/at.ddna.pdb
+share/nab/dgdb/stacking/at.tdna.pdb
+share/nab/dgdb/stacking/au.a-rna.pdb
+share/nab/dgdb/stacking/au.arna.pdb
+share/nab/dgdb/stacking/ca.a-rna.pdb
+share/nab/dgdb/stacking/ca.adna.pdb
+share/nab/dgdb/stacking/ca.arna.pdb
+share/nab/dgdb/stacking/ca.bdna.pdb
+share/nab/dgdb/stacking/ca.cdna.pdb
+share/nab/dgdb/stacking/ca.ddna.pdb
+share/nab/dgdb/stacking/ca.tdna.pdb
+share/nab/dgdb/stacking/cc.a-rna.pdb
+share/nab/dgdb/stacking/cc.adna.pdb
+share/nab/dgdb/stacking/cc.arna.pdb
+share/nab/dgdb/stacking/cc.bdna.pdb
+share/nab/dgdb/stacking/cc.cdna.pdb
+share/nab/dgdb/stacking/cc.ddna.pdb
+share/nab/dgdb/stacking/cc.tdna.pdb
+share/nab/dgdb/stacking/cg.a-rna.pdb
+share/nab/dgdb/stacking/cg.adna.pdb
+share/nab/dgdb/stacking/cg.arna.pdb
+share/nab/dgdb/stacking/cg.bdna.pdb
+share/nab/dgdb/stacking/cg.cdna.pdb
+share/nab/dgdb/stacking/cg.ddna.pdb
+share/nab/dgdb/stacking/cg.tdna.pdb
+share/nab/dgdb/stacking/cg.zdna.pdb
+share/nab/dgdb/stacking/ct.adna.pdb
+share/nab/dgdb/stacking/ct.bdna.pdb
+share/nab/dgdb/stacking/ct.cdna.pdb
+share/nab/dgdb/stacking/ct.ddna.pdb
+share/nab/dgdb/stacking/ct.tdna.pdb
+share/nab/dgdb/stacking/cu.a-rna.pdb
+share/nab/dgdb/stacking/cu.arna.pdb
+share/nab/dgdb/stacking/ga.a-rna.pdb
+share/nab/dgdb/stacking/ga.adna.pdb
+share/nab/dgdb/stacking/ga.arna.pdb
+share/nab/dgdb/stacking/ga.bdna.pdb
+share/nab/dgdb/stacking/ga.cdna.pdb
+share/nab/dgdb/stacking/ga.ddna.pdb
+share/nab/dgdb/stacking/ga.tdna.pdb
+share/nab/dgdb/stacking/gc.a-rna.pdb
+share/nab/dgdb/stacking/gc.adna.pdb
+share/nab/dgdb/stacking/gc.arna.pdb
+share/nab/dgdb/stacking/gc.bdna.pdb
+share/nab/dgdb/stacking/gc.cdna.pdb
+share/nab/dgdb/stacking/gc.ddna.pdb
+share/nab/dgdb/stacking/gc.tdna.pdb
+share/nab/dgdb/stacking/gc.zdna.pdb
+share/nab/dgdb/stacking/gg.a-rna.pdb
+share/nab/dgdb/stacking/gg.adna.pdb
+share/nab/dgdb/stacking/gg.arna.pdb
+share/nab/dgdb/stacking/gg.bdna.pdb
+share/nab/dgdb/stacking/gg.cdna.pdb
+share/nab/dgdb/stacking/gg.ddna.pdb
+share/nab/dgdb/stacking/gg.tdna.pdb
+share/nab/dgdb/stacking/gt.adna.pdb
+share/nab/dgdb/stacking/gt.bdna.pdb
+share/nab/dgdb/stacking/gt.cdna.pdb
+share/nab/dgdb/stacking/gt.ddna.pdb
+share/nab/dgdb/stacking/gt.tdna.pdb
+share/nab/dgdb/stacking/gu.a-rna.pdb
+share/nab/dgdb/stacking/gu.arna.pdb
+share/nab/dgdb/stacking/ta.adna.pdb
+share/nab/dgdb/stacking/ta.bdna.pdb
+share/nab/dgdb/stacking/ta.cdna.pdb
+share/nab/dgdb/stacking/ta.ddna.pdb
+share/nab/dgdb/stacking/ta.tdna.pdb
+share/nab/dgdb/stacking/tc.adna.pdb
+share/nab/dgdb/stacking/tc.bdna.pdb
+share/nab/dgdb/stacking/tc.cdna.pdb
+share/nab/dgdb/stacking/tc.ddna.pdb
+share/nab/dgdb/stacking/tc.tdna.pdb
+share/nab/dgdb/stacking/tg.adna.pdb
+share/nab/dgdb/stacking/tg.bdna.pdb
+share/nab/dgdb/stacking/tg.cdna.pdb
+share/nab/dgdb/stacking/tg.ddna.pdb
+share/nab/dgdb/stacking/tg.tdna.pdb
+share/nab/dgdb/stacking/tt.adna.pdb
+share/nab/dgdb/stacking/tt.bdna.pdb
+share/nab/dgdb/stacking/tt.cdna.pdb
+share/nab/dgdb/stacking/tt.ddna.pdb
+share/nab/dgdb/stacking/tt.tdna.pdb
+share/nab/dgdb/stacking/ua.a-rna.pdb
+share/nab/dgdb/stacking/ua.arna.pdb
+share/nab/dgdb/stacking/uc.a-rna.pdb
+share/nab/dgdb/stacking/uc.arna.pdb
+share/nab/dgdb/stacking/ug.a-rna.pdb
+share/nab/dgdb/stacking/ug.arna.pdb
+share/nab/dgdb/stacking/uu.a-rna.pdb
+share/nab/dgdb/stacking/uu.arna.pdb
 share/nab/examples/ADE.pdb
 share/nab/examples/Makefile
 share/nab/examples/README
@@ -83,6 +273,7 @@ share/nab/fd_data/aprna.dat
 share/nab/fd_data/arna.dat
 share/nab/fd_data/lbdna.dat
 share/nab/fd_data/sbdna.dat
+share/nab/include/config.h
 share/nab/include/defreal.h
 share/nab/include/nab.h
 share/nab/include/nabcode.h
@@ -355,6 +546,10 @@ share/nab/test/2strand.pdb
 @dirrm share/nab/include
 @dirrm share/nab/fd_data
 @dirrm share/nab/examples
+@dirrm share/nab/dgdb/stacking/CVS
+@dirrm share/nab/dgdb/stacking
+@dirrm share/nab/dgdb/basepairs/CVS
+@dirrm share/nab/dgdb/basepairs
 @dirrm share/nab/dgdb
 @dirrm share/nab/bin
 @dirrm share/nab