4 files changed, 445 insertions, 134 deletions

diff --git a/biology/ncbi-toolkit/Makefile b/biology/ncbi-toolkit/Makefile
index b63651a87c1b..42bf4ba5144f 100644
--- a/biology/ncbi-toolkit/Makefile
+++ b/biology/ncbi-toolkit/Makefile
@@ -7,6 +7,7 @@
 
 PORTNAME=	ncbi-toolkit
 PORTVERSION=	2001.04.03
+PORTREVISION=	1
 CATEGORIES=	biology
 MASTER_SITES=	ftp://ftp.ncbi.nlm.nih.gov/toolbox/ncbi_tools/old/${PORTVERSION:S/.//g}/
 DISTNAME=	ncbi
diff --git a/biology/ncbi-toolkit/files/patch-aa b/biology/ncbi-toolkit/files/patch-aa
index 19c38952dd6c..a3b4214929a9 100644
--- a/biology/ncbi-toolkit/files/patch-aa
+++ b/biology/ncbi-toolkit/files/patch-aa
@@ -1,6 +1,6 @@
---- make/makeall.unx.orig	Sat Jul  8 04:16:35 2000
-+++ make/makeall.unx	Tue Oct 24 22:35:34 2000
-@@ -782,3 +782,174 @@
+--- make/makeall.unx.orig	Thu Apr  5 09:24:30 2001
++++ make/makeall.unx	Tue Sep 18 14:49:24 2001
+@@ -851,3 +851,51 @@
  	#load $(LDFLAGS) getmuid.c medutil.c \
  	$(SRC11) $(SRC8) $(SRC7) $(SRC6) $(SRC5) $(SRC3) \
  	$(SRC2) $(SRC1) $(OTHERLIBS) -lsocket -lnsl
@@ -28,132 +28,6 @@
 +		libncbiid1.a	libncbitool.a	libnetcli_.a	libvibrant.a
 +
 +
-+INC= 	actutils.h		matrix.h		rpsutil.h \
-+		asnblock.h		mbalign.h		saldist.h \
-+		asncode.h		mblast.h		saled.h \
-+		asnent2.h		mbutils.h		saledit.h \
-+		asnfdef.h		mconsist.h		salfiles.h \
-+		asnfeat.h		mdrcherr.h		salign.h \
-+		asngen.h		medarch.h		salmedia.h \
-+		asnid0.h		medutil.h		salogif.h \
-+		asnloc.h		medview.h		salpacc.h \
-+		asnmdrs.h		mkbioseq.h		salpanel.h \
-+		asnmedli.h		mmdb1.h			salparam.h \
-+		asnmime.h		mmdb2.h			salpedit.h \
-+		asnmla.h		mmdb3.h			salprop.h \
-+		asnneten.h		mmdbapi.h		salpstat.h \
-+		asnproj.h		mmdbapi1.h		salptool.h \
-+		asnprt.h		mmdbapi2.h		salsa.h \
-+		asnpub.h		mmdbapi3.h		salsap.h \
-+		asnpubme.h		mmdbapi4.h		salstruc.h \
-+		asnres.h		mmdbdata.h		salutil.h \
-+		asnseq.h		mmdblocl.h		samutil.h \
-+		asnsset.h		ncbi.h			satutil.h \
-+		asnsubmt.h		ncbibs.h		sdisplay.h \
-+		asntax1.h		ncbibuf.h		sec.h \
-+		asntaxon.h		ncbicli.h		seed.h \
-+		bandalgn.h		ncbidraw.h		seg.h \
-+		binary.h		ncbienv.h		seqanal.h \
-+		biosrc.h		ncbierr.h		seqcons.h \
-+		blast.h			ncbifile.h		seqfltr.h \
-+		blastdef.h		ncbigif.h		seqgraph.h \
-+		blastkar.h		ncbilang.h		seqgrphx.h \
-+		blastpat.h		ncbilcl.h		seqmgr.h \
-+		blastpri.h		ncbimain.h		seqmtrx.h \
-+		blocks.h		ncbimath.h		seqpcc.h \
-+		blstspc.h		ncbimem.h		seqport.h \
-+		bspview.h		ncbimisc.h		seqscrl.h \
-+		casn.h			ncbimsg.h		seqsub.h \
-+		cdconfig.h		ncbinet.h		sequtil.h \
-+		cdd.h			ncbiopt.h		shim3d.h \
-+		cdentrez.h		ncbiport.h		simple.h \
-+		cdnewlib.h		ncbiprop.h		simutil.h \
-+		cdrgn.h			ncbisam.h		spell.h \
-+		cdrom.h			ncbisami.h		splutil.h \
-+		cdromlib.h		ncbisgml.h		sqnutils.h \
-+		cn3dentr.h		ncbisock.h		strimprt.h \
-+		cn3dmain.h		ncbisort.h		stsutil.h \
-+		cn3dmesh.h		ncbisrti.h		subutil.h \
-+		cn3dmodl.h		ncbistd.h		suggapi.h \
-+		cn3dmsel.h		ncbistr.h		suggen.h \
-+		cn3dmsg.h		ncbithr.h		suggest.h \
-+		cn3dopen.h		ncbitime.h		suggslp.h \
-+		cn3dsave.h		ncbiurl.h		sugmap.h \
-+		cn3dshim.h		ncbiwin.h		sugprefx.h \
-+		cn3dstyl.h		ncbiwww.h		tax0.h \
-+		cn3dxprt.h		netblap3.h		tax1map.h \
-+		codon.h			netcnfg.h		taxblast.h \
-+		con_file.h		netentr.h		taxext.h \
-+		con_sock.h		netlib.h		taxinc.h \
-+		con_stateless.h	netpriv.h		taxon1.h \
-+		con_url.h		netscape.h		taxuerr.h \
-+		ni_asn.h		taxutil.h \
-+		connectn.h		ni_defin.h		terr.h \
-+		connectr.h		ni_encr.h		tfuns.h \
-+		connutil.h		ni_error.h		toasn3.h \
-+		corematx.h		ni_lib.h		tofasta.h \
-+		db_list.h		ni_lib_.h		tofile.h \
-+		ddvclick.h		ni_list.h		tomedlin.h \
-+		ddvcolor.h		ni_msg.h		toporg.h \
-+		ddvcreate.h		ni_net.h		tree.h \
-+		ddvgraph.h		ni_types.h		treemgr.h \
-+		ddvmain.h		objacces.h		treeview.h \
-+		ddvopen.h		objalign.h		treevint.h \
-+		ddvpanel.h		objalignloc.h	tsprintf.h \
-+		diagnost.h		objall.h		txalign.h \
-+		dlogutil.h		objbibli.h		txclient.h \
-+		document.h		objblock.h		txcommon.h \
-+		dotmatrx.h		objblst3.h		udvdef.h \
-+		drawingp.h		objcdd.h		udviewer.h \
-+		drawseq.h		objcode.h		udvseq.h \
-+		dust.h			objent2.h		undefwin.h \
-+		dvncode.h		objentr.h		urkbias.h \
-+		echo_asn.h		objfdef.h		urkcnsrt.h \
-+		edutil.h		objfeat.h		urkdust.h \
-+		ent2api.h		objgen.h		urkepi.h \
-+		entrez.h		objloc.h		urkfltr.h \
-+		errdefn.h		objmdrs.h		urkgraph.h \
-+		explore.h		objmedli.h		urkpcc.h \
-+		fea2seg.h		objmgr.h		urkptpf.h \
-+		ffprint.h		objmime.h		urksigu.h \
-+		findrepl.h		objmla.h		urktree.h \
-+		fstyle.h		objmmdb1.h		urkutil.h \
-+		fstylep.h		objmmdb2.h		urlquery.h \
-+		ftusrstr.h		objmmdb3.h		utilpars.h \
-+		gapxdrop.h		objneten.h		utilpub.h \
-+		gather.h		objproj.h		valid.h \
-+		gbfeat.h		objprt.h		validatr.h \
-+		gbftdef.h		objpub.h		validerr.h \
-+		gbparlex.h		objpubd.h		vast2cn3d.h \
-+		gifgen.h		objpubme.h		vast2mage.h \
-+		glbpic.h		objres.h		vast2pdb.h \
-+		gphdraw.h		objseq.h		vastlocl.h \
-+		gtrdraw.h		objsset.h		vastsrv.h \
-+		gxydraw.h		objsub.h		vecscnapi.h \
-+		id1.h			objtax1.h		vecscrn.h \
-+		id1arch.h		objtaxc0.h		vibdefns.h \
-+		id1gen.h		odlbox.h		vibfltr.h \
-+		id1map.h		panels.h		vibforms.h \
-+		image.h			parsegb.h		vibgraph.h \
-+		imagelst.h		pdiagnos.h		vibincld.h \
-+		import.h		pgppop.h		vibmouse.h \
-+		jzcoll.h		pictur3d.h		vibpcc.h \
-+		jzmisc.h		picture.h		vibprocs.h \
-+		layout.h		picturep.h		vibrant.h \
-+		lbapi.h			pmfapi.h		vibtree.h \
-+		legend.h		pobutil.h		vibtypes.h \
-+		list.h			posit.h			viewer.h \
-+		lnfac.h			ppict3d.h		viewer3d.h \
-+		lookup.h		profiles.h		viewerp.h \
-+		lsqfetch.h		prtgene.h		viewmgr.h \
-+		mapgene.h		prtutil.h		vsm.h \
-+		mapmime.h		prunebsc.h		vsmfile.h \
-+		mapmla.h		pubdesc.h		vsmpriv.h \
-+		mappingp.h		puberr.h		vsmutil.h \
-+		mapproj.h		qblastapi.h		wwwblast.h \
-+		mappubme.h		readdb.h \
-+		maputil.h		regex.h
-+
 +MKDIR=	/bin/mkdir -p
 +INSTALL_PROGRAM=	/usr/bin/install -c
 +
@@ -166,12 +40,15 @@
 +	${INSTALL_PROGRAM} $? ${PREFIX}/lib/ncbi
 +
 +iinstall::
-+	${MKDIR} ${PREFIX}/include/ncbi
-+	pwd
++	${MKDIR} ${PREFIX}/include/ncbi/connect
 +	cd ../include; \
-+	for file in $(INC); do \
++	for file in *.h; do \
 +		${INSTALL_PROGRAM} $$file ${PREFIX}/include/ncbi; \
 +	done
++	cd ../include/connect; \
++	for file in *.h; do \
++		${INSTALL_PROGRAM} $$file ${PREFIX}/include/ncbi/connect; \
++	done
 +
-+install: linstall binstall
++install: iinstall linstall binstall
 +
diff --git a/biology/ncbi-toolkit/pkg-comment b/biology/ncbi-toolkit/pkg-comment
index f8b58e837a91..3afdf3b4fd80 100644
--- a/biology/ncbi-toolkit/pkg-comment
+++ b/biology/ncbi-toolkit/pkg-comment
@@ -1 +1 @@
-NCBI development toolkit, including BLAST 2.0 and GenBank/Entrez support
+NCBI development toolkit, including BLAST 2 and GenBank/Entrez support
diff --git a/biology/ncbi-toolkit/pkg-plist b/biology/ncbi-toolkit/pkg-plist
index 0ad0ea5b0419..fa539ff9ff0b 100644
--- a/biology/ncbi-toolkit/pkg-plist
+++ b/biology/ncbi-toolkit/pkg-plist
@@ -106,6 +106,439 @@ lib/ncbi/libnetentr.a
 lib/ncbi/libvibgif.a
 lib/ncbi/libvibnet.a
 lib/ncbi/libvibrant.a
+include/ncbi/connect/ncbi_ansi_ext.h
+include/ncbi/connect/ncbi_buffer.h
+include/ncbi/connect/ncbi_comm.h
+include/ncbi/connect/ncbi_connection.h
+include/ncbi/connect/ncbi_connector.h
+include/ncbi/connect/ncbi_connutil.h
+include/ncbi/connect/ncbi_core.h
+include/ncbi/connect/ncbi_file_connector.h
+include/ncbi/connect/ncbi_heapmgr.h
+include/ncbi/connect/ncbi_http_connector.h
+include/ncbi/connect/ncbi_lbsm.h
+include/ncbi/connect/ncbi_lbsm_ipc.h
+include/ncbi/connect/ncbi_priv.h
+include/ncbi/connect/ncbi_sendmail.h
+include/ncbi/connect/ncbi_server_info.h
+include/ncbi/connect/ncbi_service.h
+include/ncbi/connect/ncbi_service_connector.h
+include/ncbi/connect/ncbi_servicep.h
+include/ncbi/connect/ncbi_servicep_dispd.h
+include/ncbi/connect/ncbi_servicep_lbsmd.h
+include/ncbi/connect/ncbi_socket.h
+include/ncbi/connect/ncbi_socket_connector.h
+include/ncbi/connect/ncbi_util.h
+include/ncbi/PubStructAsn.h
+include/ncbi/a2ferr.h
+include/ncbi/a2ferrdf.h
+include/ncbi/a2fstruc.h
+include/ncbi/aacomp.h
+include/ncbi/accentr.h
+include/ncbi/accid1.h
+include/ncbi/accutils.h
+include/ncbi/actutils.h
+include/ncbi/algorend.h
+include/ncbi/alignloc.h
+include/ncbi/alignmgr.h
+include/ncbi/alignval.h
+include/ncbi/all.h
+include/ncbi/allpub.h
+include/ncbi/apparam.h
+include/ncbi/asn.h
+include/ncbi/asn2ff.h
+include/ncbi/asn2ff6.h
+include/ncbi/asn2ffg.h
+include/ncbi/asn2ffp.h
+include/ncbi/asn2gnbk.h
+include/ncbi/asnacces.h
+include/ncbi/blast.h
+include/ncbi/asnalign.h
+include/ncbi/asnbibli.h
+include/ncbi/asnblock.h
+include/ncbi/asncode.h
+include/ncbi/asnent2.h
+include/ncbi/asnfdef.h
+include/ncbi/asnfeat.h
+include/ncbi/asngen.h
+include/ncbi/asnid0.h
+include/ncbi/asnloc.h
+include/ncbi/asnmdrs.h
+include/ncbi/asnmedli.h
+include/ncbi/asnmim.h
+include/ncbi/asnmime.h
+include/ncbi/asnmla.h
+include/ncbi/asnneten.h
+include/ncbi/asnproj.h
+include/ncbi/asnprt.h
+include/ncbi/asnpub.h
+include/ncbi/asnpubme.h
+include/ncbi/asnres.h
+include/ncbi/asnseq.h
+include/ncbi/asnsset.h
+include/ncbi/asnsubmt.h
+include/ncbi/asntax1.h
+include/ncbi/asntaxon.h
+include/ncbi/bandalgn.h
+include/ncbi/binary.h
+include/ncbi/biosrc.h
+include/ncbi/blastdef.h
+include/ncbi/blastkar.h
+include/ncbi/blastpat.h
+include/ncbi/blastpri.h
+include/ncbi/blocks.h
+include/ncbi/blstspc.h
+include/ncbi/blstxml.h
+include/ncbi/bspview.h
+include/ncbi/bxmlobj.h
+include/ncbi/casn.h
+include/ncbi/cdconfig.h
+include/ncbi/cdd.h
+include/ncbi/cddposutil.h
+include/ncbi/cddsrv.h
+include/ncbi/cddutil.h
+include/ncbi/cdentrez.h
+include/ncbi/cdnewlib.h
+include/ncbi/cdrgn.h
+include/ncbi/cdrom.h
+include/ncbi/cdromlib.h
+include/ncbi/cn3dentr.h
+include/ncbi/cn3dmain.h
+include/ncbi/cn3dmesh.h
+include/ncbi/cn3dmodl.h
+include/ncbi/cn3dmsel.h
+include/ncbi/cn3dmsg.h
+include/ncbi/cn3dopen.h
+include/ncbi/cn3dsave.h
+include/ncbi/cn3dshim.h
+include/ncbi/cn3dstyl.h
+include/ncbi/cn3dxprt.h
+include/ncbi/codon.h
+include/ncbi/corematx.h
+include/ncbi/db_list.h
+include/ncbi/ddvclick.h
+include/ncbi/ddvcolor.h
+include/ncbi/ddvcreate.h
+include/ncbi/ddvgraph.h
+include/ncbi/ddvmain.h
+include/ncbi/ddvopen.h
+include/ncbi/ddvpanel.h
+include/ncbi/diagnost.h
+include/ncbi/dlogutil.h
+include/ncbi/document.h
+include/ncbi/dotmatrx.h
+include/ncbi/dotseq.h
+include/ncbi/dotviewer.h
+include/ncbi/dust.h
+include/ncbi/drawingp.h
+include/ncbi/drawseq.h
+include/ncbi/dvncode.h
+include/ncbi/echo_asn.h
+include/ncbi/edutil.h
+include/ncbi/ent2api.h
+include/ncbi/entrez.h
+include/ncbi/errdefn.h
+include/ncbi/explore.h
+include/ncbi/fastadl.h
+include/ncbi/fdlKludge.h
+include/ncbi/fdlobj.h
+include/ncbi/fea2seg.h
+include/ncbi/ffprint.h
+include/ncbi/findrepl.h
+include/ncbi/fstyle.h
+include/ncbi/fstylep.h
+include/ncbi/ftusrstr.h
+include/ncbi/gapxdrop.h
+include/ncbi/gather.h
+include/ncbi/gbfeat.h
+include/ncbi/gbftdef.h
+include/ncbi/gbparlex.h
+include/ncbi/gifgen.h
+include/ncbi/glbpic.h
+include/ncbi/gphdraw.h
+include/ncbi/gtrdraw.h
+include/ncbi/gxydraw.h
+include/ncbi/id1.h
+include/ncbi/id1arch.h
+include/ncbi/id1gen.h
+include/ncbi/id1map.h
+include/ncbi/image.h
+include/ncbi/imagelst.h
+include/ncbi/import.h
+include/ncbi/jsavlt.h
+include/ncbi/jzcoll.h
+include/ncbi/jzmisc.h
+include/ncbi/layout.h
+include/ncbi/lbapi.h
+include/ncbi/legend.h
+include/ncbi/list.h
+include/ncbi/lnfac.h
+include/ncbi/lookup.h
+include/ncbi/lsqfetch.h
+include/ncbi/mapgene.h
+include/ncbi/mapmime.h
+include/ncbi/mapmla.h
+include/ncbi/mappingp.h
+include/ncbi/mapproj.h
+include/ncbi/mappubme.h
+include/ncbi/maputil.h
+include/ncbi/matrix.h
+include/ncbi/mbalign.h
+include/ncbi/mblast.h
+include/ncbi/mbutils.h
+include/ncbi/mconsist.h
+include/ncbi/mdrcherr.h
+include/ncbi/medarch.h
+include/ncbi/medutil.h
+include/ncbi/medview.h
+include/ncbi/mimapi.h
+include/ncbi/mkbioseq.h
+include/ncbi/mmdb1.h
+include/ncbi/mmdb2.h
+include/ncbi/mmdb3.h
+include/ncbi/mmdbapi.h
+include/ncbi/mmdbapi1.h
+include/ncbi/mmdbapi2.h
+include/ncbi/mmdbapi3.h
+include/ncbi/mmdbapi4.h
+include/ncbi/mmdbdata.h
+include/ncbi/mmdblocl.h
+include/ncbi/ncbi.h
+include/ncbi/ncbibs.h
+include/ncbi/ncbibuf.h
+include/ncbi/ncbicli.h
+include/ncbi/ncbidraw.h
+include/ncbi/ncbienv.h
+include/ncbi/ncbierr.h
+include/ncbi/ncbifile.h
+include/ncbi/ncbigif.h
+include/ncbi/ncbilang.h
+include/ncbi/ncbilcl.h
+include/ncbi/ncbimain.h
+include/ncbi/ncbimath.h
+include/ncbi/ncbimem.h
+include/ncbi/ncbimisc.h
+include/ncbi/ncbimsg.h
+include/ncbi/ncbinet.h
+include/ncbi/ncbiopt.h
+include/ncbi/ncbiport.h
+include/ncbi/ncbiprop.h
+include/ncbi/ncbisam.h
+include/ncbi/ncbisami.h
+include/ncbi/ncbisgml.h
+include/ncbi/ncbisock.h
+include/ncbi/ncbisort.h
+include/ncbi/ncbisrti.h
+include/ncbi/ncbistd.h
+include/ncbi/ncbistr.h
+include/ncbi/ncbithr.h
+include/ncbi/ncbitime.h
+include/ncbi/ncbiurl.h
+include/ncbi/ncbiwin.h
+include/ncbi/ncbiwww.h
+include/ncbi/needleman.h
+include/ncbi/netblap3.h
+include/ncbi/netcnfg.h
+include/ncbi/netentr.h
+include/ncbi/netlib.h
+include/ncbi/netpriv.h
+include/ncbi/netscape.h
+include/ncbi/ni_asn.h
+include/ncbi/ni_defin.h
+include/ncbi/ni_encr.h
+include/ncbi/ni_error.h
+include/ncbi/ni_lib.h
+include/ncbi/ni_lib_.h
+include/ncbi/ni_list.h
+include/ncbi/ni_msg.h
+include/ncbi/ni_net.h
+include/ncbi/ni_types.h
+include/ncbi/objacces.h
+include/ncbi/objalign.h
+include/ncbi/objalignloc.h
+include/ncbi/objall.h
+include/ncbi/objbibli.h
+include/ncbi/objblock.h
+include/ncbi/objblst3.h
+include/ncbi/objcdd.h
+include/ncbi/objcode.h
+include/ncbi/objent2.h
+include/ncbi/objentr.h
+include/ncbi/objfdef.h
+include/ncbi/objfeat.h
+include/ncbi/objgen.h
+include/ncbi/objloc.h
+include/ncbi/objmdrs.h
+include/ncbi/objmedli.h
+include/ncbi/objmgr.h
+include/ncbi/objmim.h
+include/ncbi/objmime.h
+include/ncbi/objmla.h
+include/ncbi/objmmdb1.h
+include/ncbi/objmmdb2.h
+include/ncbi/objmmdb3.h
+include/ncbi/objneten.h
+include/ncbi/objproj.h
+include/ncbi/objprt.h
+include/ncbi/objpub.h
+include/ncbi/objpubd.h
+include/ncbi/objpubme.h
+include/ncbi/objres.h
+include/ncbi/objseq.h
+include/ncbi/objsset.h
+include/ncbi/objsub.h
+include/ncbi/objtax1.h
+include/ncbi/odlbox.h
+include/ncbi/panels.h
+include/ncbi/parsegb.h
+include/ncbi/pdiagnos.h
+include/ncbi/pgppop.h
+include/ncbi/pictur3d.h
+include/ncbi/picture.h
+include/ncbi/picturep.h
+include/ncbi/pmfapi.h
+include/ncbi/pobutil.h
+include/ncbi/posit.h
+include/ncbi/ppict3d.h
+include/ncbi/profiles.h
+include/ncbi/prtgene.h
+include/ncbi/prtutil.h
+include/ncbi/prunebsc.h
+include/ncbi/pubdesc.h
+include/ncbi/puberr.h
+include/ncbi/qblastapi.h
+include/ncbi/regex.h
+include/ncbi/readdb.h
+include/ncbi/rpsutil.h
+include/ncbi/saldist.h
+include/ncbi/saled.h
+include/ncbi/saledit.h
+include/ncbi/salfiles.h
+include/ncbi/salign.h
+include/ncbi/salmedia.h
+include/ncbi/salogif.h
+include/ncbi/salpacc.h
+include/ncbi/salpanel.h
+include/ncbi/salparam.h
+include/ncbi/salpedit.h
+include/ncbi/salprop.h
+include/ncbi/salpstat.h
+include/ncbi/salptool.h
+include/ncbi/salsa.h
+include/ncbi/salsap.h
+include/ncbi/salstruc.h
+include/ncbi/salutil.h
+include/ncbi/samutil.h
+include/ncbi/satutil.h
+include/ncbi/sdisplay.h
+include/ncbi/sec.h
+include/ncbi/seed.h
+include/ncbi/seg.h
+include/ncbi/seqanal.h
+include/ncbi/seqcons.h
+include/ncbi/seqfltr.h
+include/ncbi/seqgraph.h
+include/ncbi/seqgrphx.h
+include/ncbi/seqmgr.h
+include/ncbi/seqmtrx.h
+include/ncbi/seqpcc.h
+include/ncbi/seqport.h
+include/ncbi/seqscrl.h
+include/ncbi/seqsub.h
+include/ncbi/sequtil.h
+include/ncbi/shim3d.h
+include/ncbi/simple.h
+include/ncbi/simutil.h
+include/ncbi/spell.h
+include/ncbi/splutil.h
+include/ncbi/sqnutils.h
+include/ncbi/strimprt.h
+include/ncbi/strucapi.h
+include/ncbi/stsutil.h
+include/ncbi/subutil.h
+include/ncbi/suggapi.h
+include/ncbi/suggen.h
+include/ncbi/suggest.h
+include/ncbi/terr.h
+include/ncbi/suggslp.h
+include/ncbi/sugmap.h
+include/ncbi/sugprefx.h
+include/ncbi/tax1map.h
+include/ncbi/taxblast.h
+include/ncbi/taxext.h
+include/ncbi/taxinc.h
+include/ncbi/taxon1.h
+include/ncbi/taxuerr.h
+include/ncbi/taxutil.h
+include/ncbi/tfuns.h
+include/ncbi/thrdatd.h
+include/ncbi/thrddecl.h
+include/ncbi/toasn3.h
+include/ncbi/tofasta.h
+include/ncbi/tofile.h
+include/ncbi/tomedlin.h
+include/ncbi/toporg.h
+include/ncbi/tree.h
+include/ncbi/treemgr.h
+include/ncbi/treeview.h
+include/ncbi/treevint.h
+include/ncbi/tsprintf.h
+include/ncbi/txalign.h
+include/ncbi/txclient.h
+include/ncbi/txcommon.h
+include/ncbi/udvdef.h
+include/ncbi/udviewer.h
+include/ncbi/udvseq.h
+include/ncbi/undefwin.h
+include/ncbi/urkbias.h
+include/ncbi/urkcnsrt.h
+include/ncbi/urkdust.h
+include/ncbi/urkepi.h
+include/ncbi/urkfltr.h
+include/ncbi/urkgraph.h
+include/ncbi/urkpcc.h
+include/ncbi/urkptpf.h
+include/ncbi/urksigu.h
+include/ncbi/urktree.h
+include/ncbi/urkutil.h
+include/ncbi/urlquery.h
+include/ncbi/utilpars.h
+include/ncbi/utilpub.h
+include/ncbi/valid.h
+include/ncbi/validatr.h
+include/ncbi/validerr.h
+include/ncbi/vast2cn3d.h
+include/ncbi/vast2mage.h
+include/ncbi/vast2pdb.h
+include/ncbi/vastlocl.h
+include/ncbi/vsm.h
+include/ncbi/vastsrv.h
+include/ncbi/vecscnapi.h
+include/ncbi/vecscrn.h
+include/ncbi/vibdefns.h
+include/ncbi/vibfltr.h
+include/ncbi/vibforms.h
+include/ncbi/vibgraph.h
+include/ncbi/vibincld.h
+include/ncbi/vibmouse.h
+include/ncbi/vibpcc.h
+include/ncbi/vibprocs.h
+include/ncbi/vibrant.h
+include/ncbi/vibtree.h
+include/ncbi/vibtypes.h
+include/ncbi/viewer.h
+include/ncbi/viewer3d.h
+include/ncbi/viewerp.h
+include/ncbi/viewmgr.h
+include/ncbi/vsmfile.h
+include/ncbi/vsmpriv.h
+include/ncbi/vsmutil.h
+include/ncbi/wrpsb.h
+include/ncbi/wrpsbtool.h
+include/ncbi/wwwblast.h
+include/ncbi/xmlblast.h
+@dirrm include/ncbi/connect
+@dirrm include/ncbi
 @dirrm lib/ncbi
 %%PORTDOCS%%@dirrm share/doc/ncbi-toolkit/images
 %%PORTDOCS%%@dirrm share/doc/ncbi-toolkit/fa2htgs