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authorBrad Davis <brd@FreeBSD.org>2015-04-10 15:39:01 +0000
committerBrad Davis <brd@FreeBSD.org>2015-04-10 15:39:01 +0000
commit4417c1e08490470597320cba816bdf427bb93655 (patch)
tree4577926b1945dfab86ca9ea306f94316557a2a07 /biology/paml
parent19301085cd1267f0dc6dc5af8d24f00e0b359a61 (diff)
downloadports-4417c1e08490470597320cba816bdf427bb93655.tar.gz
ports-4417c1e08490470597320cba816bdf427bb93655.zip
Notes
Diffstat (limited to 'biology/paml')
-rw-r--r--biology/paml/Makefile8
-rw-r--r--biology/paml/distinfo4
2 files changed, 5 insertions, 7 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile
index cde5e4507ef9..03a7616be267 100644
--- a/biology/paml/Makefile
+++ b/biology/paml/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= paml
-PORTVERSION= 4.8
+PORTVERSION= 4.8a
CATEGORIES= biology
MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/
DISTNAME= ${PORTNAME}${PORTVERSION}
@@ -10,10 +10,8 @@ DISTNAME= ${PORTNAME}${PORTVERSION}
MAINTAINER= jrm@ftfl.ca
COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML)
-BROKEN= Unfetchable
-
USES= gmake tar:tgz
-WRKSRC= ${WRKDIR}/${PORTNAME}${PORTVERSION}/src
+WRKSRC= ${WRKDIR}/${PORTNAME}4.8/src
MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}"
BINARIES= baseml basemlg chi2 codeml evolver pamp yn00
@@ -27,7 +25,7 @@ do-install:
.endfor
@${MKDIR} ${STAGEDIR}${DOCSDIR}
.for f in ${DOC_FILES}
- ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}${PORTVERSION}/doc/${f} ${STAGEDIR}${DOCSDIR}
+ ${INSTALL_DATA} ${WRKSRC}/../doc/${f} ${STAGEDIR}${DOCSDIR}
.endfor
.include <bsd.port.mk>
diff --git a/biology/paml/distinfo b/biology/paml/distinfo
index 585099df9353..da4a5bbf3895 100644
--- a/biology/paml/distinfo
+++ b/biology/paml/distinfo
@@ -1,2 +1,2 @@
-SHA256 (paml4.8.tgz) = 67498283308824cd5a3986db382bec275432e817f6719b8faf99fa2509f32781
-SIZE (paml4.8.tgz) = 4835110
+SHA256 (paml4.8a.tgz) = e45f37e1cfc1c24de276266a7bc2926fc12eac9602c56c1c025bc8f6dfb737f3
+SIZE (paml4.8a.tgz) = 5879158