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authorMaho Nakata <maho@FreeBSD.org>2008-03-07 02:38:09 +0000
committerMaho Nakata <maho@FreeBSD.org>2008-03-07 02:38:09 +0000
commit89a3cd0f56e3b66427011fb2c658c733b7054476 (patch)
tree5bff3c99498032b00045df7dcc0bcbed77c6d2bf /biology/pymol
parentfdfe47b791d3893c12eb43518cd01ed1d4792a55 (diff)
downloadports-89a3cd0f56e3b66427011fb2c658c733b7054476.tar.gz
ports-89a3cd0f56e3b66427011fb2c658c733b7054476.zip
Notes
Diffstat (limited to 'biology/pymol')
-rw-r--r--biology/pymol/Makefile49
-rw-r--r--biology/pymol/distinfo6
-rw-r--r--biology/pymol/files/patch-Rules.make71
-rw-r--r--biology/pymol/files/patch-setup+pymol+com+linux-rh7x27
-rw-r--r--biology/pymol/files/patch-setup.py19
-rw-r--r--biology/pymol/pkg-plist1419
6 files changed, 636 insertions, 955 deletions
diff --git a/biology/pymol/Makefile b/biology/pymol/Makefile
index dc1d75cfe776..d053e5b0e62e 100644
--- a/biology/pymol/Makefile
+++ b/biology/pymol/Makefile
@@ -5,13 +5,9 @@
# $FreeBSD$
PORTNAME= pymol
-PORTVERSION= 0.99rc6
-PORTREVISION= 2
+PORTVERSION= 1.0r2
CATEGORIES= biology python
-MASTER_SITES= ${MASTER_SITE_SOURCEFORGE}
-MASTER_SITE_SUBDIR= pymol
-DISTNAME= pymol-${PORTVERSION:S/./_/}-src
-EXTRACT_SUFX= .tgz
+MASTER_SITES= ${MASTER_SITE_LOCAL:S|%SUBDIR%|maho/pymol|}
MAINTAINER= maho@FreeBSD.org
COMMENT= Free and Open-Source molecular modeling system
@@ -26,42 +22,15 @@ WRKSRC= ${WRKDIR}/pymol-${PORTVERSION}
USE_GMAKE= yes
USE_PYTHON= yes
-.include <bsd.port.pre.mk>
+pre-build:
+ @${REINPLACE_CMD} -e "s+%%LOCALBASE%%+${LOCALBASE}+" ${WRKSRC}/setup.py
-.if ${ARCH} == "ia64"
-BROKEN= Does not build on ${ARCH}
-.endif
-
-.if ${ARCH} == "sparc64" || ${ARCH} == "amd64" || ${ARCH} == "ia64"
-PICFLAG?= -fPIC
-.else
-PICFLAG?= -fpic
-.endif
-
-pre-patch:
- @${CP} ${WRKSRC}/setup/Rules.linux ${WRKSRC}/Rules.make
-
-post-patch:
- @${CP} ${WRKSRC}/setup/pymol.com.linux-rh7x ${WRKSRC}/pymol
- @${REINPLACE_CMD} -e 's,@PREFIX@,${PREFIX},g' -e 's,@LOCALBASE@,${LOCALBASE},g' ${WRKSRC}/pymol
- ${REINPLACE_CMD} -e 's,@PYTHON_VERSION@,${PYTHON_VERSION},g' \
- -e 's,@LOCALBASE@,${LOCALBASE},g' \
- -e 's,@X11BASE@,${X11BASE},g' \
- -e 's,@CFLAGS@,${CFLAGS},g' \
- -e 's,@CC@,${CC},g' \
- -e 's,@PICFLAG@,${PICFLAG},g' ${WRKSRC}/Rules.make
+do-build:
+ @cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} ${PYTHON_CMD} ${PYSETUP} build
do-install:
+ @(cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} ${PYTHON_CMD} ${PYSETUP} install \
+ ; ${SETENV} ${MAKE_ENV} ${PYTHON_CMD} setup2.py install)
@${INSTALL_SCRIPT} ${WRKSRC}/pymol ${PREFIX}/bin/pymol
- @${MKDIR} ${PREFIX}/share/pymol
- @${TAR} -C ${WRKSRC} -chf - data modules test | \
- ${TAR} -xf - -C ${PREFIX}/share/pymol
-.if !defined(NOPORTDOCS)
- @${MKDIR} ${EXAMPLESDIR}
- @${TAR} -C ${WRKSRC}/examples --exclude package -chf - . | \
- ${TAR} -xf - -C ${EXAMPLESDIR}
-.endif
- @${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/share/pymol/modules
- @${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/share/pymol/modules
-.include <bsd.port.post.mk>
+.include <bsd.port.mk>
diff --git a/biology/pymol/distinfo b/biology/pymol/distinfo
index a7292cf0ce50..5bf879c618ae 100644
--- a/biology/pymol/distinfo
+++ b/biology/pymol/distinfo
@@ -1,3 +1,3 @@
-MD5 (pymol-0_99rc6-src.tgz) = cb29385ab523f648d4db47a222b1d03e
-SHA256 (pymol-0_99rc6-src.tgz) = d56bebc1316fd3442c54dee5bc4b2979041943bf50a9b34b44839595fd1b9a59
-SIZE (pymol-0_99rc6-src.tgz) = 4198816
+MD5 (pymol-1.0r2.tar.gz) = 196bd9a8f7de6e7c9e77eacd463ce140
+SHA256 (pymol-1.0r2.tar.gz) = 876d1422c4fd9a8bb792ac38e960afb4cc59b54e0e0d26bf44daaeaff122b16f
+SIZE (pymol-1.0r2.tar.gz) = 7636761
diff --git a/biology/pymol/files/patch-Rules.make b/biology/pymol/files/patch-Rules.make
deleted file mode 100644
index 7091e92ddf73..000000000000
--- a/biology/pymol/files/patch-Rules.make
+++ /dev/null
@@ -1,71 +0,0 @@
---- Rules.make.orig Sun Sep 17 20:42:52 2006
-+++ Rules.make Sun Sep 17 20:48:26 2006
-@@ -4,27 +4,27 @@
- #
- #- Building ----------------------------------------------------------
- #--- Tell "make" how to get to PyMOL
--PYMOL_PATH = ${HOME}/pymol
-+PYMOL_PATH = @LOCALBASE@
- #---------------------------------------------------------------------
- #
- #- Dependencies ------------------------------------------------------
- #--- X-windows
--XLIB_DIR = -L/usr/X11R6/lib
--XINC_DIR = -I/usr/X11R6/include
-+XLIB_DIR = -L@X11BASE@/lib
-+XINC_DIR = -I@X11BASE@/include
- #--- Python
--PYTHON_EXE = $(PYMOL_PATH)/ext/bin/python
-+PYTHON_EXE = $(PYMOL_PATH)/bin/python
- PYTHON_LIB =
- PYTHON_LIB_DIR =
--PYTHON_INC_DIR = -I$(PYMOL_PATH)/ext/include/python2.3 \
-- -I$(PYMOL_PATH)/ext/include/python2.3/Numeric
-+PYTHON_INC_DIR = -I$(PYMOL_PATH)/include/@PYTHON_VERSION@ \
-+ -I$(PYMOL_PATH)/include/@PYTHON_VERSION@/Numeric
- #--- Other external dependencies
--EXT_INC_DIR = -I$(PYMOL_PATH)/ext/include
--EXT_LIB_DIR = -L$(PYMOL_PATH)/ext/lib
-+EXT_INC_DIR = -I$(PYMOL_PATH)/include
-+EXT_LIB_DIR = -L$(PYMOL_PATH)/lib
- #---------------------------------------------------------------------
- #
- #- Build for LINUX as an importable module ---------------------------
- #--- System libraries
--LIBS = $(PYTHON_LIB) -lglut -lGL -lGLU -ldl -lpng -lXmu $(ZLIB) -lm
-+LIBS = $(PYTHON_LIB) -lglut -lGL -lGLU -lpng -lXmu $(ZLIB) -lm
- #--- PyMOL configuration
- DEFS = -D_PYMOL_MODULE -D_PYMOL_NUMPY -D_PYMOL_INLINE
- #--- How we build shared libraries
-@@ -32,19 +32,19 @@
- #--- What are we trying to build?
- DEST = -o modules/pymol/_cmd.so
- #--- Gcc Options for Linux
--CCOPT1 = -march=i486 -D__i686__ -ffast-math -Wall -ansi -Wmissing-prototypes
-+CCOPT1 = @PICFLAG@ @CFLAGS@ #-march=i486 -D__i686__ -ffast-math -Wall -ansi -Wmissing-prototypes
- #--- libraries for PyOpenGL
- PYOGL_LIB = -lglut -lGL -lGLU -lXmu -lXi
- #---------------------------------------------------------------------
- #
- #- Choose One --------------------------------------------------------
- #--- GCC Optimized
--CCOPT2 = -O3 -funroll-loops -fomit-frame-pointer -finline-limit=10000
-+#CCOPT2 = -O3 -funroll-loops -fomit-frame-pointer -finline-limit=10000
- #--- GCC Profiling
- #CCOPT2 = -pg -O3 -funroll-loops
- #--- Debugging
- #CCOPT2 = -g -D_MemoryDebug_ON
--CCOPT2 = -g
-+CCOPT2 = #-g
- #---------------------------------------------------------------------
- #
- #- Choose One --------------------------------------------------------
-@@ -70,7 +70,7 @@
- # No changes normally required below here
- #---------------------------------------------------------------------
-
--CC = cc
-+CC = @CC@
-
- LIB_DIRS = $(EXT_LIB_DIR) $(PYTHON_LIB_DIR) $(XLIB_DIR)
-
diff --git a/biology/pymol/files/patch-setup+pymol+com+linux-rh7x b/biology/pymol/files/patch-setup+pymol+com+linux-rh7x
deleted file mode 100644
index c1273c309745..000000000000
--- a/biology/pymol/files/patch-setup+pymol+com+linux-rh7x
+++ /dev/null
@@ -1,27 +0,0 @@
---- setup/pymol.com.linux-rh7x Sun Nov 20 02:46:39 2005
-+++ setup/pymol.com.linux-rh7x Sat Jul 1 13:28:49 2006
-@@ -5,7 +5,7 @@
- # ==============================================================
- # Set PYMOL_PATH to point at the correct location on your system
- #
--PYMOL_PATH=/usr/local/pymol
-+PYMOL_PATH=@LOCALBASE@/share/pymol
- export PYMOL_PATH
- #
- # ==============================================================
-@@ -13,13 +13,13 @@
- #
- # python modules
- #
--if [ "$PYTHONPATH" == "" ]; then
-+if [ "$PYTHONPATH" = "" ]; then
- PYTHONPATH=${PYMOL_PATH}/modules
- else
- PYTHONPATH=${PYMOL_PATH}/modules:${PYTHONPATH}
- fi
- export PYTHONPATH
- #
--/usr/bin/python $PYMOL_PATH/modules/pymol/__init__.py "$@"
-+@LOCALBASE@/bin/python $PYMOL_PATH/modules/pymol/__init__.py "$@"
-
-
diff --git a/biology/pymol/files/patch-setup.py b/biology/pymol/files/patch-setup.py
new file mode 100644
index 000000000000..08bb35418fee
--- /dev/null
+++ b/biology/pymol/files/patch-setup.py
@@ -0,0 +1,19 @@
+--- setup.py.orig 2007-07-03 07:11:15.000000000 +0900
++++ setup.py 2008-03-06 17:59:33.000000000 +0900
+@@ -88,6 +88,8 @@
+ "layer0","layer1","layer2",
+ "layer3","layer4","layer5",
+ "/usr/include/freetype2",
++ "%%LOCALBASE%%/include",
++ "%%LOCALBASE%%/include/freetype2",
+ # "/users/warren/ext/include",
+ # VMD plugin support
+ # "contrib/uiuc/plugins/include",
+@@ -98,6 +100,7 @@
+ pyogl_libs = ["GL","GLU","glut"]
+ lib_dirs=[
+ "/usr/X11R6/lib",
++ "%%LOCALBASE%%/lib",
+ # "/users/warren/pymol/ext/lib"
+ ]
+ def_macros=[("_PYMOL_MODULE",None),
diff --git a/biology/pymol/pkg-plist b/biology/pymol/pkg-plist
index 269b5262b20a..7300fff42a06 100644
--- a/biology/pymol/pkg-plist
+++ b/biology/pymol/pkg-plist
@@ -1,815 +1,606 @@
bin/pymol
-share/pymol/data/chempy/fragments/ace.pkl
-share/pymol/data/chempy/fragments/acetylene.pkl
-share/pymol/data/chempy/fragments/ala.pkl
-share/pymol/data/chempy/fragments/arg.pkl
-share/pymol/data/chempy/fragments/asn.pkl
-share/pymol/data/chempy/fragments/asp.pkl
-share/pymol/data/chempy/fragments/benzene.pkl
-share/pymol/data/chempy/fragments/butane.pkl
-share/pymol/data/chempy/fragments/ct_ala.pkl
-share/pymol/data/chempy/fragments/ct_arg.pkl
-share/pymol/data/chempy/fragments/ct_asn.pkl
-share/pymol/data/chempy/fragments/ct_asp.pkl
-share/pymol/data/chempy/fragments/ct_cys.pkl
-share/pymol/data/chempy/fragments/ct_gln.pkl
-share/pymol/data/chempy/fragments/ct_glu.pkl
-share/pymol/data/chempy/fragments/ct_gly.pkl
-share/pymol/data/chempy/fragments/ct_hid.pkl
-share/pymol/data/chempy/fragments/ct_hie.pkl
-share/pymol/data/chempy/fragments/ct_hip.pkl
-share/pymol/data/chempy/fragments/ct_his.pkl
-share/pymol/data/chempy/fragments/ct_ile.pkl
-share/pymol/data/chempy/fragments/ct_leu.pkl
-share/pymol/data/chempy/fragments/ct_lys.pkl
-share/pymol/data/chempy/fragments/ct_met.pkl
-share/pymol/data/chempy/fragments/ct_phe.pkl
-share/pymol/data/chempy/fragments/ct_pro.pkl
-share/pymol/data/chempy/fragments/ct_ser.pkl
-share/pymol/data/chempy/fragments/ct_thr.pkl
-share/pymol/data/chempy/fragments/ct_trp.pkl
-share/pymol/data/chempy/fragments/ct_tyr.pkl
-share/pymol/data/chempy/fragments/ct_val.pkl
-share/pymol/data/chempy/fragments/cyclobutane.pkl
-share/pymol/data/chempy/fragments/cycloheptane.pkl
-share/pymol/data/chempy/fragments/cyclohexane.pkl
-share/pymol/data/chempy/fragments/cyclopentadiene.pkl
-share/pymol/data/chempy/fragments/cyclopentane.pkl
-share/pymol/data/chempy/fragments/cys.pkl
-share/pymol/data/chempy/fragments/ethylene.pkl
-share/pymol/data/chempy/fragments/formaldehyde.pkl
-share/pymol/data/chempy/fragments/formamide.pkl
-share/pymol/data/chempy/fragments/gln.pkl
-share/pymol/data/chempy/fragments/glu.pkl
-share/pymol/data/chempy/fragments/gly.pkl
-share/pymol/data/chempy/fragments/hid.pkl
-share/pymol/data/chempy/fragments/hie.pkl
-share/pymol/data/chempy/fragments/hip.pkl
-share/pymol/data/chempy/fragments/his.pkl
-share/pymol/data/chempy/fragments/ile.pkl
-share/pymol/data/chempy/fragments/leu.pkl
-share/pymol/data/chempy/fragments/lys.pkl
-share/pymol/data/chempy/fragments/met.pkl
-share/pymol/data/chempy/fragments/methane.pkl
-share/pymol/data/chempy/fragments/nme.pkl
-share/pymol/data/chempy/fragments/nt_ala.pkl
-share/pymol/data/chempy/fragments/nt_arg.pkl
-share/pymol/data/chempy/fragments/nt_asn.pkl
-share/pymol/data/chempy/fragments/nt_asp.pkl
-share/pymol/data/chempy/fragments/nt_cys.pkl
-share/pymol/data/chempy/fragments/nt_gln.pkl
-share/pymol/data/chempy/fragments/nt_glu.pkl
-share/pymol/data/chempy/fragments/nt_gly.pkl
-share/pymol/data/chempy/fragments/nt_hid.pkl
-share/pymol/data/chempy/fragments/nt_hie.pkl
-share/pymol/data/chempy/fragments/nt_hip.pkl
-share/pymol/data/chempy/fragments/nt_his.pkl
-share/pymol/data/chempy/fragments/nt_ile.pkl
-share/pymol/data/chempy/fragments/nt_leu.pkl
-share/pymol/data/chempy/fragments/nt_lys.pkl
-share/pymol/data/chempy/fragments/nt_met.pkl
-share/pymol/data/chempy/fragments/nt_phe.pkl
-share/pymol/data/chempy/fragments/nt_pro.pkl
-share/pymol/data/chempy/fragments/nt_ser.pkl
-share/pymol/data/chempy/fragments/nt_thr.pkl
-share/pymol/data/chempy/fragments/nt_trp.pkl
-share/pymol/data/chempy/fragments/nt_tyr.pkl
-share/pymol/data/chempy/fragments/nt_val.pkl
-share/pymol/data/chempy/fragments/peptide.pkl
-share/pymol/data/chempy/fragments/phe.pkl
-share/pymol/data/chempy/fragments/pro.pkl
-share/pymol/data/chempy/fragments/realtime.pkl
-share/pymol/data/chempy/fragments/ser.pkl
-share/pymol/data/chempy/fragments/sulfone.pkl
-share/pymol/data/chempy/fragments/thr.pkl
-share/pymol/data/chempy/fragments/trp.pkl
-share/pymol/data/chempy/fragments/tyr.pkl
-share/pymol/data/chempy/fragments/val.pkl
-share/pymol/data/chempy/sidechains/generate1.py
-share/pymol/data/chempy/sidechains/generate2.py
-share/pymol/data/chempy/sidechains/sc_bb_dep.pkl
-share/pymol/data/chempy/sidechains/sc_bb_dep.py
-share/pymol/data/chempy/sidechains/sc_bb_ind.pkl
-share/pymol/data/chempy/sidechains/sc_bb_ind.py
-share/pymol/data/chempy/sidechains/sc_library.pkl
-share/pymol/data/chempy/tinker/Makefile
-share/pymol/data/chempy/tinker/chempy.prm
-share/pymol/data/chempy/tinker/make99_simple.py
-share/pymol/data/chempy/tinker/make_simple.py
-share/pymol/data/chempy/tinker/parm94.dat
-share/pymol/data/chempy/tinker/parm94_rsm.dat
-share/pymol/data/chempy/tinker/parm96.dat
-share/pymol/data/chempy/tinker/parm96_rsm.dat
-share/pymol/data/chempy/tinker/parm99.dat
-share/pymol/data/chempy/tinker/parm99_simple.dat
-share/pymol/data/chempy/tinker/parm99_wld.dat
-share/pymol/data/chempy/tinker/parm_simple.dat
-share/pymol/data/chempy/tinker/parm_simple.inp
-share/pymol/data/chempy/water.pdb
-share/pymol/data/demo/1hpv.r3d
-share/pymol/data/demo/1tii.pdb
-share/pymol/data/demo/cgo03.py
-share/pymol/data/demo/il2.pdb
-share/pymol/data/demo/pept.pdb
-share/pymol/data/demo/pept.pkl
-share/pymol/data/pmg_tk/bitmaps/builder/aro5.gif
-share/pymol/data/pmg_tk/bitmaps/builder/aro5.xbm
-share/pymol/data/pmg_tk/bitmaps/builder/aro6.gif
-share/pymol/data/pmg_tk/bitmaps/builder/aro6.xbm
-share/pymol/data/pmg_tk/bitmaps/builder/cyc4.gif
-share/pymol/data/pmg_tk/bitmaps/builder/cyc4.xbm
-share/pymol/data/pmg_tk/bitmaps/builder/cyc5.gif
-share/pymol/data/pmg_tk/bitmaps/builder/cyc5.xbm
-share/pymol/data/pmg_tk/bitmaps/builder/cyc6.gif
-share/pymol/data/pmg_tk/bitmaps/builder/cyc6.xbm
-share/pymol/data/pmg_tk/bitmaps/builder/cyc7.gif
-share/pymol/data/pmg_tk/bitmaps/builder/cyc7.xbm
-share/pymol/data/pymol/cmyk.png
-share/pymol/data/pymol/matrices/BLOSUM62
-share/pymol/data/pymol/splash.png
-share/pymol/data/tut/1hpv.pdb
-share/pymol/modules/chempy/__init__.py
-share/pymol/modules/chempy/__init__.pyc
-share/pymol/modules/chempy/__init__.pyo
-share/pymol/modules/chempy/arc.py
-share/pymol/modules/chempy/arc.pyc
-share/pymol/modules/chempy/arc.pyo
-share/pymol/modules/chempy/bmin/__init__.py
-share/pymol/modules/chempy/bmin/__init__.pyc
-share/pymol/modules/chempy/bmin/__init__.pyo
-share/pymol/modules/chempy/bmin/commands.py
-share/pymol/modules/chempy/bmin/commands.pyc
-share/pymol/modules/chempy/bmin/commands.pyo
-share/pymol/modules/chempy/bmin/realtime.py
-share/pymol/modules/chempy/bmin/realtime.pyc
-share/pymol/modules/chempy/bmin/realtime.pyo
-share/pymol/modules/chempy/bmin/state.py
-share/pymol/modules/chempy/bmin/state.pyc
-share/pymol/modules/chempy/bmin/state.pyo
-share/pymol/modules/chempy/bmin/util.py
-share/pymol/modules/chempy/bmin/util.pyc
-share/pymol/modules/chempy/bmin/util.pyo
-share/pymol/modules/chempy/bond_amber.py
-share/pymol/modules/chempy/bond_amber.pyc
-share/pymol/modules/chempy/bond_amber.pyo
-share/pymol/modules/chempy/bond_mmff.py
-share/pymol/modules/chempy/bond_mmff.pyc
-share/pymol/modules/chempy/bond_mmff.pyo
-share/pymol/modules/chempy/bonds.py
-share/pymol/modules/chempy/bonds.pyc
-share/pymol/modules/chempy/bonds.pyo
-share/pymol/modules/chempy/brick.py
-share/pymol/modules/chempy/brick.pyc
-share/pymol/modules/chempy/brick.pyo
-share/pymol/modules/chempy/cc1.py
-share/pymol/modules/chempy/cc1.pyc
-share/pymol/modules/chempy/cc1.pyo
-share/pymol/modules/chempy/cex.py
-share/pymol/modules/chempy/cex.pyc
-share/pymol/modules/chempy/cex.pyo
-share/pymol/modules/chempy/champ/__init__.py
-share/pymol/modules/chempy/champ/__init__.pyc
-share/pymol/modules/chempy/champ/__init__.pyo
-share/pymol/modules/chempy/champ/_champ.so
-share/pymol/modules/chempy/champ/amber99.py
-share/pymol/modules/chempy/champ/amber99.pyc
-share/pymol/modules/chempy/champ/amber99.pyo
-share/pymol/modules/chempy/champ/assign.py
-share/pymol/modules/chempy/champ/assign.pyc
-share/pymol/modules/chempy/champ/assign.pyo
-share/pymol/modules/chempy/champ/formal_charges.py
-share/pymol/modules/chempy/champ/formal_charges.pyc
-share/pymol/modules/chempy/champ/formal_charges.pyo
-share/pymol/modules/chempy/charge.py
-share/pymol/modules/chempy/charge.pyc
-share/pymol/modules/chempy/charge.pyo
-share/pymol/modules/chempy/cpv.py
-share/pymol/modules/chempy/cpv.pyc
-share/pymol/modules/chempy/cpv.pyo
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+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/test
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/scripts/metaphorics
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/scripts
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/package/redhat
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/package
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/launching
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/devel
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/cookbook
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/chempy
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/tut
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/matrices
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pmg_tk/bitmaps/builder
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pmg_tk/bitmaps
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pmg_tk
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/demo
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/chempy/tinker
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/chempy/sidechains
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/chempy/fragments
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/chempy
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/opengl/glut
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/opengl/glu
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/opengl/gl
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/opengl
+@dirrm %%PYTHON_SITELIBDIR%%/pymol