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| author | Marcelo Araujo <araujo@FreeBSD.org> | 2013-01-14 08:04:38 +0000 |
|---|---|---|
| committer | Marcelo Araujo <araujo@FreeBSD.org> | 2013-01-14 08:04:38 +0000 |
| commit | 05e78fe84a921ae6ae0693ad331d263c75d14dff (patch) | |
| tree | 2817937a8e693b4cc507bc086546dfff7275d443 /biology/t_coffee/Makefile | |
| parent | 3b850ce68d852965134102be1c43b7a5a26ba585 (diff) | |
| download | ports-05e78fe84a921ae6ae0693ad331d263c75d14dff.tar.gz ports-05e78fe84a921ae6ae0693ad331d263c75d14dff.zip | |
Notes
Diffstat (limited to 'biology/t_coffee/Makefile')
| -rw-r--r-- | biology/t_coffee/Makefile | 42 |
1 files changed, 23 insertions, 19 deletions
diff --git a/biology/t_coffee/Makefile b/biology/t_coffee/Makefile index 216884fc8d47..6e6c28d7b721 100644 --- a/biology/t_coffee/Makefile +++ b/biology/t_coffee/Makefile @@ -2,36 +2,40 @@ # $FreeBSD$ PORTNAME= t_coffee -PORTVERSION= 5.68 +PORTVERSION= 9.03 +DISTVERSIONSUFFIX= .r1318 CATEGORIES= biology -MASTER_SITES= http://www.tcoffee.org/Packages/ -DISTNAME= T-COFFEE_distribution_Version_${PORTVERSION} +MASTER_SITES= http://www.tcoffee.org/Packages/Stable/%SUBDIR%/ +MASTER_SITE_SUBDIR= Version_${PORTVERSION}${DISTVERSIONSUFFIX} +DISTNAME= T-COFFEE_distribution_Version_${PORTVERSION}${DISTVERSIONSUFFIX} MAINTAINER= ports@FreeBSD.org COMMENT= A multiple DNA or protein sequence alignment package -BUILD_DEPENDS= clustalw:${PORTSDIR}/biology/clustalw -RUN_DEPENDS:= ${BUILD_DEPENDS} +LICENSE= GPLv2 + +RUN_DEPENDS= clustalw:${PORTSDIR}/biology/clustalw + +OPTIONS_DEFINE= EXAMPLES BUILD_WRKSRC= ${WRKSRC}/t_coffee_source -MAKE_ENV= MV=${MV} USER_BIN=${PREFIX}/bin \ - CLUSTALW_4_TCOFFEE=${LOCALBASE}/bin/clustalw +USE_FORTRAN= yes +MAKE_ENV= FCC="${FC} ${FFLAGS}" MAKEFILE= makefile +MAKE_JOBS_SAFE= yes + +PORTEXAMPLES= * +PLIST_FILES= bin/TMalign bin/t_coffee + +.include <bsd.port.options.mk> do-install: - ${INSTALL_PROGRAM} ${WRKSRC}/bin/t_coffee ${PREFIX}/bin - -post-install: -.if !defined(NOPORTDOCS) - @ ${MKDIR} ${DOCSDIR}/html - ${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR} - ${INSTALL_DATA} ${WRKSRC}/license.txt ${DOCSDIR} - ${INSTALL_DATA} ${WRKSRC}/html/* ${DOCSDIR}/html -.endif -.if !defined(NOPORTEXAMPLES) - @ ${MKDIR} ${EXAMPLESDIR} - cd ${WRKSRC}/example && ${COPYTREE_SHARE} \* ${EXAMPLESDIR} + (cd ${BUILD_WRKSRC} \ + && ${INSTALL_PROGRAM} TMalign t_coffee ${PREFIX}/bin) +.if ${PORT_OPTIONS:MEXAMPLES} + @${MKDIR} ${EXAMPLESDIR} + @(cd ${WRKSRC}/example && ${COPYTREE_SHARE} . ${EXAMPLESDIR}) .endif .include <bsd.port.mk> |