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| author | Jason W. Bacon <jwb@FreeBSD.org> | 2019-02-20 01:36:51 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2019-02-20 01:36:51 +0000 |
| commit | 1895acd4622b5a2510fa5e47e5281080980db422 (patch) | |
| tree | 8b078432d6b80dbb214e6e0eb85317bcf71443f3 /biology/unanimity/pkg-plist | |
| parent | a90b307d8120624bfcb173a1cf34fdb60664c67c (diff) | |
| download | ports-1895acd4622b5a2510fa5e47e5281080980db422.tar.gz ports-1895acd4622b5a2510fa5e47e5281080980db422.zip | |
Notes
Diffstat (limited to 'biology/unanimity/pkg-plist')
| -rw-r--r-- | biology/unanimity/pkg-plist | 82 |
1 files changed, 82 insertions, 0 deletions
diff --git a/biology/unanimity/pkg-plist b/biology/unanimity/pkg-plist new file mode 100644 index 000000000000..d39cb8f2449b --- /dev/null +++ b/biology/unanimity/pkg-plist @@ -0,0 +1,82 @@ +bin/ChimeraLabeler +bin/arrow +bin/ccs +bin/ccs_sim +bin/gcpp +bin/genomic_sim +bin/variantCaller +include/pacbio/UnanimityConfig.h +include/pacbio/UnanimityVersion.h +include/pacbio/align/AffineAlignment.h +include/pacbio/align/AlignConfig.h +include/pacbio/align/BandedAligner.h +include/pacbio/align/BandedChainAlignment.h +include/pacbio/align/ChainScorer.h +include/pacbio/align/ChainSeeds.h +include/pacbio/align/ChainSeedsConfig.h +include/pacbio/align/FilterSeeds.h +include/pacbio/align/FindSeeds.h +include/pacbio/align/FindSeedsConfig.h +include/pacbio/align/HomopolymerHasher.h +include/pacbio/align/LinearAlignment.h +include/pacbio/align/LocalAlignment.h +include/pacbio/align/PairwiseAlignment.h +include/pacbio/align/SeedScorer.h +include/pacbio/align/SparseAlignment.h +include/pacbio/align/internal/BCAlignBlocks.h +include/pacbio/align/internal/BCAlignImpl.h +include/pacbio/ccs/Consensus.h +include/pacbio/ccs/ConsensusSettings.h +include/pacbio/ccs/SparseAlignment.h +include/pacbio/ccs/Whitelist.h +include/pacbio/chimera/ChimeraLabel.h +include/pacbio/chimera/ChimeraLabeler.h +include/pacbio/chimera/ChimeraResultWriter.h +include/pacbio/consensus/AbstractMatrix.h +include/pacbio/consensus/Coverage.h +include/pacbio/consensus/EasyReadScorer.h +include/pacbio/consensus/Evaluator.h +include/pacbio/consensus/Integrator.h +include/pacbio/consensus/IntervalMask.h +include/pacbio/consensus/MatrixViewConvention.h +include/pacbio/consensus/ModelConfig.h +include/pacbio/consensus/ModelSelection.h +include/pacbio/consensus/Mutation.h +include/pacbio/consensus/Polish.h +include/pacbio/consensus/PolishResult.h +include/pacbio/consensus/Template.h +include/pacbio/consensus/internal/ModelInternalInitializer.h +include/pacbio/data/ChemistryMapping.h +include/pacbio/data/ChemistryTriple.h +include/pacbio/data/Interval.h +include/pacbio/data/IntervalTree.h +include/pacbio/data/PlainOption.h +include/pacbio/data/Read.h +include/pacbio/data/ReadId.h +include/pacbio/data/Sequence.h +include/pacbio/data/State.h +include/pacbio/data/StrandType.h +include/pacbio/data/SubreadResultCounter.h +include/pacbio/data/internal/BaseEncoding.h +include/pacbio/data/internal/ConversionFunctions.h +include/pacbio/denovo/PoaConsensus.h +include/pacbio/denovo/PoaGraph.h +include/pacbio/denovo/RangeFinder.h +include/pacbio/denovo/SparsePoa.h +include/pacbio/exception/CCSExceptions.h +include/pacbio/exception/InvalidEvaluatorException.h +include/pacbio/exception/ModelError.h +include/pacbio/exception/StateError.h +include/pacbio/io/Utility.h +include/pacbio/parallel/WorkQueue.h +include/pacbio/util/ExecUtils.h +include/pacbio/util/Timer.h +lib/libunanimity.so +lib/libunanimity.so.3 +lib/libunanimity.so.3.0 +lib/libunanimity.so.3.0.0 +%%PYTHON_SITELIBDIR%%/ConsensusCore2.py +%%PYTHON_SITELIBDIR%%/ConsensusCore2.pyc +%%PYTHON_SITELIBDIR%%/ConsensusCore2.%%PYTHON_PYOEXTENSION%% +%%PYTHON_SITELIBDIR%%/_ConsensusCore2.so +libdata/pkgconfig/unanimity.pc |