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authorYuri Victorovich <yuri@FreeBSD.org>2022-04-15 17:08:59 +0000
committerYuri Victorovich <yuri@FreeBSD.org>2022-04-15 19:09:57 +0000
commit1aa4b199504fab66ea1575a27c7280b4b41ee6b4 (patch)
tree15cbc72a2c328299cc781642f81353e99646c6d2 /biology
parenta0b584125364687041614f52f76d564acfa59c8b (diff)
Diffstat (limited to 'biology')
-rw-r--r--biology/py-scikit-bio/Makefile9
-rw-r--r--biology/py-scikit-bio/distinfo6
2 files changed, 8 insertions, 7 deletions
diff --git a/biology/py-scikit-bio/Makefile b/biology/py-scikit-bio/Makefile
index 5a4f0b01d3c7..0b446244e87f 100644
--- a/biology/py-scikit-bio/Makefile
+++ b/biology/py-scikit-bio/Makefile
@@ -1,5 +1,5 @@
PORTNAME= scikit-bio
-PORTVERSION= 0.5.6
+PORTVERSION= 0.5.7
CATEGORIES= biology education python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -14,17 +14,18 @@ BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}CacheControl>=0.11.5:www/py-cachecontrol@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}decorator>=3.4.2:devel/py-decorator@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}hdmedians>=0.13:math/py-hdmedians@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}h5py>=2.9.0:science/py-h5py@${PY_FLAVOR} \
+ ${PYTHON_PKGNAMEPREFIX}hdmedians>=0.14.1:math/py-hdmedians@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}ipython>=3.2.0:devel/ipython@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}lockfile>=0.10.2:devel/py-lockfile@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}matplotlib>=1.4.3:math/py-matplotlib@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}natsort>=4.0.3:devel/py-natsort@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pandas>=1.0.0:math/py-pandas@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}scikit-learn>=0.19.1:science/py-scikit-learn@${PY_FLAVOR} \
- ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR}
+ ${PYTHON_PKGNAMEPREFIX}scipy>=1.3.0:science/py-scipy@${PY_FLAVOR}
USES= python:3.7+
-USE_PYTHON= autoplist distutils
+USE_PYTHON= distutils cython autoplist
CONFLICTS_INSTALL= ${PYTHON_PKGNAMEPREFIX}ddtrace # lib/python3.8/site-packages/benchmarks/__init__.py
diff --git a/biology/py-scikit-bio/distinfo b/biology/py-scikit-bio/distinfo
index 2f100c10744b..9c48346f4bed 100644
--- a/biology/py-scikit-bio/distinfo
+++ b/biology/py-scikit-bio/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1589588901
-SHA256 (scikit-bio-0.5.6.tar.gz) = 48b73ec53ce0ff2c2e3e05f3cfcf93527c1525a8d3e9dd4ae317b4219c37f0ea
-SIZE (scikit-bio-0.5.6.tar.gz) = 8380439
+TIMESTAMP = 1649956313
+SHA256 (scikit-bio-0.5.7.tar.gz) = 6343ca0c621e2fcc5d1c042c8be3200664c5325956a83bea751cf1bcc75d1da9
+SIZE (scikit-bio-0.5.7.tar.gz) = 8731049