diff options
| author | Martin Wilke <miwi@FreeBSD.org> | 2008-09-30 08:54:55 +0000 |
|---|---|---|
| committer | Martin Wilke <miwi@FreeBSD.org> | 2008-09-30 08:54:55 +0000 |
| commit | 8e93b103e5b91a016acc022b761f27e920a3b819 (patch) | |
| tree | d89b49c86f3d969d574c19d0edb9ba0e0f53aeb8 /biology | |
| parent | c56f78d70accdf779be5715be7e30cef33c6236e (diff) | |
| download | ports-8e93b103e5b91a016acc022b761f27e920a3b819.tar.gz ports-8e93b103e5b91a016acc022b761f27e920a3b819.zip | |
Notes
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/paml/Makefile | 12 | ||||
| -rw-r--r-- | biology/paml/distinfo | 6 | ||||
| -rw-r--r-- | biology/paml/pkg-plist | 3 |
3 files changed, 13 insertions, 8 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile index 2699c6d7e92e..becaf04a06ee 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -6,19 +6,20 @@ # PORTNAME= paml -PORTVERSION= 3.15 +PORTVERSION= 4.1 CATEGORIES= biology MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/ DISTNAME= ${PORTNAME}${PORTVERSION} -MAINTAINER= ports@FreeBSD.org +MAINTAINER= wenheping@gmail.com COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) USE_GMAKE= YES -WRKSRC= ${WRKDIR}/${DISTNAME:S/b//g}/src +WRKSRC= ${WRKDIR}/${DISTNAME:S/.//g}/src MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" BINARIES= baseml basemlg chi2 codeml evolver pamp yn00 +DOC_FILES= MCMCtreeDoc.pdf pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt do-install: .for f in ${BINARIES} @@ -26,8 +27,9 @@ do-install: .endfor .if !defined(NOPORTDOCS) ${MKDIR} ${DOCSDIR} - ${INSTALL_DATA} ${WRKDIR}/${DISTNAME:S/b//g}/doc/pamlDOC.pdf \ - ${DOCSDIR} +.for f in ${DOC_FILES} + ${INSTALL_DATA} ${WRKDIR}/${DISTNAME:S/.//g}/doc/${f} ${DOCSDIR} +.endfor .endif .include <bsd.port.mk> diff --git a/biology/paml/distinfo b/biology/paml/distinfo index 57b0bf3978b4..94ddb605a61c 100644 --- a/biology/paml/distinfo +++ b/biology/paml/distinfo @@ -1,3 +1,3 @@ -MD5 (paml3.15.tar.gz) = c54ba7e15a66b57dc1140feea22e5695 -SHA256 (paml3.15.tar.gz) = f698b1d57b514e5e06e746899eae1245d098e96881e2a31c9b8fc956beb4f62a -SIZE (paml3.15.tar.gz) = 2364043 +MD5 (paml4.1.tar.gz) = df8d8a790f5ef29e7266640d4493ec1d +SHA256 (paml4.1.tar.gz) = 64680a56304bb3f5cd61cfc9be253fe1fe37250cb450bceaaf76b99ee08111f1 +SIZE (paml4.1.tar.gz) = 2865301 diff --git a/biology/paml/pkg-plist b/biology/paml/pkg-plist index 8126bb252983..3e71b3f39f51 100644 --- a/biology/paml/pkg-plist +++ b/biology/paml/pkg-plist @@ -7,4 +7,7 @@ bin/evolver bin/pamp bin/yn00 %%PORTDOCS%%%%DOCSDIR%%/pamlDOC.pdf +%%PORTDOCS%%%%DOCSDIR%%/MCMCtreeDoc.pdf +%%PORTDOCS%%%%DOCSDIR%%/pamlFAQs.pdf +%%PORTDOCS%%%%DOCSDIR%%/pamlHistory.txt %%PORTDOCS%%@dirrm %%DOCSDIR%% |