diff options
| author | Jason W. Bacon <jwb@FreeBSD.org> | 2019-06-14 00:37:59 +0000 |
|---|---|---|
| committer | Jason W. Bacon <jwb@FreeBSD.org> | 2019-06-14 00:37:59 +0000 |
| commit | e66bb2a167dc3f76185ab3ea94ec70e33f58d623 (patch) | |
| tree | 0a1dfb708d2005f7de9b3222e0efc173910443cc /biology | |
| parent | 75a54fb559232e9013ae3801d400a6c2291828ad (diff) | |
| download | ports-e66bb2a167dc3f76185ab3ea94ec70e33f58d623.tar.gz ports-e66bb2a167dc3f76185ab3ea94ec70e33f58d623.zip | |
Notes
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/ncbi-blast+/Makefile | 14 |
1 files changed, 10 insertions, 4 deletions
diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile index d2a451c39ea9..5eb3ebd668b1 100644 --- a/biology/ncbi-blast+/Makefile +++ b/biology/ncbi-blast+/Makefile @@ -13,8 +13,6 @@ COMMENT= NCBI implementation of Basic Local Alignment Search Tool LICENSE= PD LICENSE_FILE= ${WRKSRC}/scripts/projects/blast/LICENSE -BROKEN_powerpc64= fails to build: Error 2 - LIB_DEPENDS= libpcre.so:devel/pcre \ liblmdb.so:databases/lmdb \ liblzo2.so:archivers/lzo2 \ @@ -29,7 +27,8 @@ LIB_DEPENDS= libpcre.so:devel/pcre \ libgcrypt.so:security/libgcrypt \ libgpg-error.so:security/libgpg-error \ libsqlite3.so:databases/sqlite3 -RUN_DEPENDS= p5-List-MoreUtils>=0:lang/p5-List-MoreUtils +RUN_DEPENDS= p5-List-MoreUtils>=0:lang/p5-List-MoreUtils \ + p5-JSON>=0:converters/p5-JSON USES= compiler:openmp gmake shebangfix perl5 python USE_LDCONFIG= yes @@ -48,10 +47,17 @@ CONFIGURE_ARGS= AR="ar cr" --without-boost --libdir=${PREFIX}/lib/ncbi-tools++ WRKSRC_SUBDIR= c++ +.include <bsd.port.pre.mk> + +# Force newer GCC on platforms using GCC 4.2 as base +.if ${CHOSEN_COMPILER_TYPE} == gcc +USE_GCC= yes +.endif + post-install: @${RM} ${STAGEDIR}${PREFIX}/include/ncbi-tools++/*/*/.cvsignore.extra @${RM} -rf ${STAGEDIR}${PREFIX}/lib/X11 @${RMDIR} ${STAGEDIR}${PREFIX}/lib/debug ${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/ncbi-tools++/*.so -.include <bsd.port.mk> +.include <bsd.port.post.mk> |