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| author | Jan Beich <jbeich@FreeBSD.org> | 2020-03-08 21:56:36 +0000 |
|---|---|---|
| committer | Jan Beich <jbeich@FreeBSD.org> | 2020-03-08 21:56:36 +0000 |
| commit | e1d56a9db2541dd41f1907a5a19a686a326831cc (patch) | |
| tree | 6a5120e4890360e5d98bb4a63ff86cfc80e8392f /biology | |
| parent | 0c69caeef6092fbf32d6330958bbb88f74c02443 (diff) | |
| download | ports-e1d56a9db2541dd41f1907a5a19a686a326831cc.tar.gz ports-e1d56a9db2541dd41f1907a5a19a686a326831cc.zip | |
Drop dependency on devel/openmp
- Drop if devel/llvm* was used as a substitute
Approved by: yuri, rene (earlier version)
Differential Revision: https://reviews.freebsd.org/D23020
Notes
Notes:
svn path=/head/; revision=528082
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/abyss/Makefile | 4 | ||||
| -rw-r--r-- | biology/hhsuite/Makefile | 3 | ||||
| -rw-r--r-- | biology/py-fastTSNE/Makefile | 5 |
3 files changed, 5 insertions, 7 deletions
diff --git a/biology/abyss/Makefile b/biology/abyss/Makefile index aeb44e6bb3e8..5e23d28105b2 100644 --- a/biology/abyss/Makefile +++ b/biology/abyss/Makefile @@ -2,6 +2,7 @@ PORTNAME= abyss DISTVERSION= 2.2.3 +PORTREVISION= 1 CATEGORIES= biology MAINTAINER= yuri@FreeBSD.org @@ -16,8 +17,7 @@ BUILD_DEPENDS= ${LOCALBASE}/include/boost/version.hpp:devel/boost-libs \ ghc:lang/ghc \ pandoc:textproc/hs-pandoc # pandoc is required just for one man page: abyss-sealer LIB_DEPENDS= libffi.so:devel/libffi \ - libgmp.so:math/gmp \ - libomp.so:devel/openmp + libgmp.so:math/gmp RUN_DEPENDS= bash:shells/bash \ gmake:devel/gmake diff --git a/biology/hhsuite/Makefile b/biology/hhsuite/Makefile index e2893c58d65f..1130bb4ced3c 100644 --- a/biology/hhsuite/Makefile +++ b/biology/hhsuite/Makefile @@ -3,7 +3,7 @@ PORTNAME= hhsuite DISTVERSIONPREFIX= v DISTVERSION= 3.2.0 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= biology science MAINTAINER= yuri@FreeBSD.org @@ -13,7 +13,6 @@ LICENSE= GPLv3 LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= openmpi>0:net/openmpi -LIB_DEPENDS= libomp.so:devel/openmp RUN_DEPENDS= openmpi>0:net/openmpi USES= cmake compiler:c++11-lang perl5 python shebangfix diff --git a/biology/py-fastTSNE/Makefile b/biology/py-fastTSNE/Makefile index 8ba0ef155b22..1cb3bb986913 100644 --- a/biology/py-fastTSNE/Makefile +++ b/biology/py-fastTSNE/Makefile @@ -2,7 +2,7 @@ PORTNAME= fastTSNE DISTVERSION= 0.2.13 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -13,8 +13,7 @@ COMMENT= Fast, parallel implementations of t-SNE LICENSE= BSD3CLAUSE BUILD_DEPENDS= ${PYNUMPY} -LIB_DEPENDS= libfftw3.so:math/fftw3 \ - libomp.so:devel/openmp +LIB_DEPENDS= libfftw3.so:math/fftw3 RUN_DEPENDS= ${PYNUMPY} \ ${PYTHON_PKGNAMEPREFIX}numba>=0.38.1:devel/py-numba@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}scipy>0:science/py-scipy@${PY_FLAVOR} \ |