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authorNorikatsu Shigemura <nork@FreeBSD.org>2003-08-18 16:15:10 +0000
committerNorikatsu Shigemura <nork@FreeBSD.org>2003-08-18 16:15:10 +0000
commitefb928619b234d49b326a13f59a6e2ee354bf902 (patch)
treec62bd82140831e81442480b9cefc699e0c08f08d /biology
parentdfc14c855f8ec76c9bd42bc90e325a160cc5d6cf (diff)
downloadports-efb928619b234d49b326a13f59a6e2ee354bf902.tar.gz
ports-efb928619b234d49b326a13f59a6e2ee354bf902.zip
Notes
Diffstat (limited to 'biology')
-rw-r--r--biology/emboss/Makefile10
-rw-r--r--biology/genpak/Makefile6
2 files changed, 7 insertions, 9 deletions
diff --git a/biology/emboss/Makefile b/biology/emboss/Makefile
index f0f1916da216..d68ed70bcb69 100644
--- a/biology/emboss/Makefile
+++ b/biology/emboss/Makefile
@@ -7,10 +7,10 @@
PORTNAME= emboss
PORTVERSION= 2.4.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= ftp://ftp.uk.embnet.org/pub/EMBOSS/old/ \
- ftp://ftp.es.embnet.org/pub/software/emboss/EMBOSS/ \
+ ftp://ftp.es.embnet.org/pub/software/emboss/EMBOSS/old \
ftp://ftp.ebi.ac.uk/pub/software/unix/EMBOSS/
DISTFILES= ${PORTNAME:U}-${PORTVERSION}${EXTRACT_SUFX}
DIST_SUBDIR= ${PORTNAME}
@@ -19,9 +19,7 @@ EXTRACT_ONLY= ${PORTNAME:U}-${PORTVERSION}${EXTRACT_SUFX}
MAINTAINER= wjv@FreeBSD.org
COMMENT= A collection of open source tools for genetic sequence analysis
-BROKEN= Checksum mismatch
-
-LIB_DEPENDS= gd.4:${PORTSDIR}/graphics/gd2
+LIB_DEPENDS= gd.4:${PORTSDIR}/graphics/gd
USE_SUBMAKE= yes
USE_GMAKE= yes
@@ -35,7 +33,7 @@ PKGMESSAGE= ${WRKDIR}/pkg-message
.include "${WRKDIRPREFIX}${.CURDIR}/Makefile.inc"
.endif
-CONFIGURE_ENV+= CPPFLAGS="-I${LOCALBASE}/include/gd" \
+CONFIGURE_ENV+= CPPFLAGS="-I${LOCALBASE}/include" \
LIBS="-L${LOCALBASE}/lib -L${X11BASE}/lib"
SCRIPTS_ENV+= WRKDIRPREFIX="${WRKDIRPREFIX}" \
MKDIR="${MKDIR}" RM="${RM}"
diff --git a/biology/genpak/Makefile b/biology/genpak/Makefile
index bbe6849ae57f..c6db35c12bab 100644
--- a/biology/genpak/Makefile
+++ b/biology/genpak/Makefile
@@ -8,16 +8,16 @@
PORTNAME= genpak
PORTVERSION= 0.26
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= http://www.bioinformatics.org/genpak/download/
DISTNAME= gp-${PORTVERSION}
EXTRACT_SUFX= .tgz
MAINTAINER= ports@FreeBSD.org
-COMMENT= GP is a set of small utilities to manipulate DNA sequences
+COMMENT= A set of small utilities to manipulate DNA sequences
-LIB_DEPENDS= gd.4:${PORTSDIR}/graphics/gd2
+LIB_DEPENDS= gd.4:${PORTSDIR}/graphics/gd
USE_GMAKE= yes
MAKE_ENV= GMAKE="${GMAKE}" MANPREFIX="${MANPREFIX}"