diff options
| author | Antoine Brodin <antoine@FreeBSD.org> | 2019-11-06 12:48:32 +0000 |
|---|---|---|
| committer | Antoine Brodin <antoine@FreeBSD.org> | 2019-11-06 12:48:32 +0000 |
| commit | cc8ad7de9b786478d98d89f893f727969ff10a5c (patch) | |
| tree | a8d88971682ad17f920feb443ddc5ac6b3c408b6 /biology | |
| parent | 7b15a42f40e8532459008d3c4cacc3716af2e6d0 (diff) | |
| download | ports-cc8ad7de9b786478d98d89f893f727969ff10a5c.tar.gz ports-cc8ad7de9b786478d98d89f893f727969ff10a5c.zip | |
Notes
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/consed/Makefile | 2 | ||||
| -rw-r--r-- | biology/mrbayes/Makefile | 2 | ||||
| -rw-r--r-- | biology/paml/Makefile | 2 | ||||
| -rw-r--r-- | biology/plinkseq/Makefile | 2 | ||||
| -rw-r--r-- | biology/seqtools/Makefile | 2 | ||||
| -rw-r--r-- | biology/t_coffee/Makefile | 2 | ||||
| -rw-r--r-- | biology/ugene/Makefile | 2 | ||||
| -rw-r--r-- | biology/unanimity/Makefile | 2 |
8 files changed, 16 insertions, 0 deletions
diff --git a/biology/consed/Makefile b/biology/consed/Makefile index 8d8d99740d60..dd1716294e90 100644 --- a/biology/consed/Makefile +++ b/biology/consed/Makefile @@ -11,6 +11,8 @@ DISTNAME= ${PORTNAME}_linux MAINTAINER= mzaki@m.u-tokyo.ac.jp COMMENT= Graphical tool for editing Phrap assemblies +BROKEN= unfetchable + RUN_DEPENDS= phred:biology/phred \ phrap:biology/phrap diff --git a/biology/mrbayes/Makefile b/biology/mrbayes/Makefile index accda2d10abc..3b6aa8e6bc3f 100644 --- a/biology/mrbayes/Makefile +++ b/biology/mrbayes/Makefile @@ -10,6 +10,8 @@ MASTER_SITES= SF MAINTAINER= mzaki@m.u-tokyo.ac.jp COMMENT= Bayesian inference of phylogeny +BROKEN= unfetchable + OPTIONS_DEFINE= EXAMPLES USES= gmake readline:port diff --git a/biology/paml/Makefile b/biology/paml/Makefile index 9935a1ee5ab8..01042b9940c7 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -10,6 +10,8 @@ DISTNAME= ${PORTNAME}${DISTVERSION} MAINTAINER= jrm@FreeBSD.org COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) +BROKEN= unfetchable + LICENSE= GPLv3 USES= dos2unix gmake tar:tgz diff --git a/biology/plinkseq/Makefile b/biology/plinkseq/Makefile index fbd2eed1a3d9..3f332375a703 100644 --- a/biology/plinkseq/Makefile +++ b/biology/plinkseq/Makefile @@ -11,6 +11,8 @@ DISTFILES= ${PORTNAME}-src-${PORTVERSION}.tgz MAINTAINER= jwb@FreeBSD.org COMMENT= Toolset for working with human genetic variation data +BROKEN= unfetchable + LICENSE= GPLv2 BROKEN_aarch64= Does not build: Host architecture was not detected as supported by protobuf diff --git a/biology/seqtools/Makefile b/biology/seqtools/Makefile index d2402382dfc6..967f43ae3bdd 100644 --- a/biology/seqtools/Makefile +++ b/biology/seqtools/Makefile @@ -9,6 +9,8 @@ MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION MAINTAINER= pi@FreeBSD.org COMMENT= Tools for visualising sequence alignments +BROKEN= unfetchable + LICENSE= GPLv3 LIB_DEPENDS= libcurl.so:ftp/curl \ diff --git a/biology/t_coffee/Makefile b/biology/t_coffee/Makefile index c27b44e5abb7..0893e49a22bc 100644 --- a/biology/t_coffee/Makefile +++ b/biology/t_coffee/Makefile @@ -12,6 +12,8 @@ DISTNAME= T-COFFEE_distribution_Version_${PORTVERSION}${DISTVERSIONSUFFIX} MAINTAINER= ports@FreeBSD.org COMMENT= Multiple DNA or protein sequence alignment package +BROKEN= unfetchable + LICENSE= GPLv2 RUN_DEPENDS= clustalw:biology/clustalw diff --git a/biology/ugene/Makefile b/biology/ugene/Makefile index d119963b1625..2bd6726bcc3b 100644 --- a/biology/ugene/Makefile +++ b/biology/ugene/Makefile @@ -14,6 +14,8 @@ EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX} MAINTAINER= h2+fbsdports@fsfe.org COMMENT= Free, open-source, cross-platform bioinformatics toolkit +BROKEN= unfetchable + LICENSE= GPLv2+ LICENSE_FILE= ${WRKSRC}/LICENSE.txt diff --git a/biology/unanimity/Makefile b/biology/unanimity/Makefile index b0991c99cd17..c9337c24a481 100644 --- a/biology/unanimity/Makefile +++ b/biology/unanimity/Makefile @@ -9,6 +9,8 @@ CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org COMMENT= Pacific Biosciences consensus library and applications +BROKEN= unfetchable + LICENSE= BSD3CLAUSE LICENSE_FILE= ${WRKSRC}/LICENSE |