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authorDmitry Marakasov <amdmi3@FreeBSD.org>2016-05-19 11:09:14 +0000
committerDmitry Marakasov <amdmi3@FreeBSD.org>2016-05-19 11:09:14 +0000
commite87a8bd319cefd3a75d9d061fe9ac6bad980b0db (patch)
treee9e6dc56d6e4b04cfacf45ccb3b74fdd987668e3 /biology
parent867a3ba355276083619d6e050ed5885ecfc04d75 (diff)
downloadports-e87a8bd319cefd3a75d9d061fe9ac6bad980b0db.tar.gz
ports-e87a8bd319cefd3a75d9d061fe9ac6bad980b0db.zip
Notes
Diffstat (limited to 'biology')
-rw-r--r--biology/bcftools/files/pkg-message.in2
-rw-r--r--biology/blat/files/pkg-message.in4
-rw-r--r--biology/emboss/files/pkg-message.in8
-rw-r--r--biology/fasta3/files/pkg-message.in4
-rw-r--r--biology/lagan/files/pkg-message.in4
-rw-r--r--biology/samtools/files/pkg-message.in2
6 files changed, 12 insertions, 12 deletions
diff --git a/biology/bcftools/files/pkg-message.in b/biology/bcftools/files/pkg-message.in
index fde8ffcdab72..508265e42c52 100644
--- a/biology/bcftools/files/pkg-message.in
+++ b/biology/bcftools/files/pkg-message.in
@@ -1,5 +1,5 @@
The miscellaneous tools included with Bcftools have been installed to
-%%PREFIX%%/bin/samtools_misc
+%%PREFIX%%/bin/samtools_misc
Add that directory to your path if you want to use these tools.
diff --git a/biology/blat/files/pkg-message.in b/biology/blat/files/pkg-message.in
index 1f988c0d687b..62f0ef49d50a 100644
--- a/biology/blat/files/pkg-message.in
+++ b/biology/blat/files/pkg-message.in
@@ -1,8 +1,8 @@
===============================================================================
A CGI script (webBlat) and instructions on how to set up a BLAT web server
- have been installed in
-
+ have been installed in
+
%%PREFIX%%/lib/blat
===============================================================================
diff --git a/biology/emboss/files/pkg-message.in b/biology/emboss/files/pkg-message.in
index cdedc5082b5c..b6ec9699274c 100644
--- a/biology/emboss/files/pkg-message.in
+++ b/biology/emboss/files/pkg-message.in
@@ -5,7 +5,7 @@
To run EMBOSS programs make sure that %%PREFIX%%/bin is in your PATH.
- In order to see graphical output from some EMBOSS programs, you will
+ In order to see graphical output from some EMBOSS programs, you will
need to set the following environment variable in your shell:
set PLPLOT_LIB to: "%%PREFIX%%/share/EMBOSS"
@@ -13,15 +13,15 @@
A sample configuration file has been installed in
%%DATADIR%%/emboss.default.template
- This must be renamed to emboss.default and edited to suit your site
+ This must be renamed to emboss.default and edited to suit your site
and requirements.
A .embossrc file in a user's home directory overrides settings in the
system-wide emboss.default.
Additional third party applications for EMBOSS can be installed from the
- biology/embassy port. Remember, though that if you installed EMBOSS in a
- PREFIX other than the default, you will have to install EMBASSY into this
+ biology/embassy port. Remember, though that if you installed EMBOSS in a
+ PREFIX other than the default, you will have to install EMBASSY into this
same PREFIX.
=============================================================================
diff --git a/biology/fasta3/files/pkg-message.in b/biology/fasta3/files/pkg-message.in
index f43513546af4..03bb1d8ff0f6 100644
--- a/biology/fasta3/files/pkg-message.in
+++ b/biology/fasta3/files/pkg-message.in
@@ -2,8 +2,8 @@
The FASTA3 package has been successfully installed.
- A sample configuration file has been installed to
- %%PREFIX%%/etc
+ A sample configuration file has been installed to
+ %%PREFIX%%/etc
as "fastlibs.sample". This may be renamed to "fastlibs" and edited
to suit the requirements of a particular site.
diff --git a/biology/lagan/files/pkg-message.in b/biology/lagan/files/pkg-message.in
index 994a417239c8..d2696dff32ee 100644
--- a/biology/lagan/files/pkg-message.in
+++ b/biology/lagan/files/pkg-message.in
@@ -2,8 +2,8 @@
All the executables, scripts, Readmes and utilities were installed
under %%LAGAN_DIR%%
-
+
Add this to your PATH and set the environment variable
LAGAN_DIR to point to this directory.
-
+
===============================================================================
diff --git a/biology/samtools/files/pkg-message.in b/biology/samtools/files/pkg-message.in
index a9ba5d2e1a7b..e996d1340a7e 100644
--- a/biology/samtools/files/pkg-message.in
+++ b/biology/samtools/files/pkg-message.in
@@ -1,5 +1,5 @@
The miscellaneous tools included with Samtools have been installed to
-%%PREFIX%%/bin/samtools_misc
+%%PREFIX%%/bin/samtools_misc
Add that directory to your path if you want to use these tools.