diff options
| author | Wen Heping <wen@FreeBSD.org> | 2014-07-27 07:27:17 +0000 |
|---|---|---|
| committer | Wen Heping <wen@FreeBSD.org> | 2014-07-27 07:27:17 +0000 |
| commit | aa18ea4cb6ef741832444a8cc6342b3c5738449b (patch) | |
| tree | 501e65a78b835b3e503e1599e6a8e37f5f2391de /biology | |
| parent | ee8d5f46d40a468bc01bebfd02b3ba96fae2a7b5 (diff) | |
Notes
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/p5-bioperl/Makefile | 4 | ||||
| -rw-r--r-- | biology/p5-bioperl/distinfo | 4 | ||||
| -rw-r--r-- | biology/p5-bioperl/files/patch-Bio-Root-Build.pm | 13 |
3 files changed, 11 insertions, 10 deletions
diff --git a/biology/p5-bioperl/Makefile b/biology/p5-bioperl/Makefile index f84b692d63b5..7f2a9ff819ee 100644 --- a/biology/p5-bioperl/Makefile +++ b/biology/p5-bioperl/Makefile @@ -2,14 +2,14 @@ # $FreeBSD$ PORTNAME= bioperl -PORTVERSION= 1.6.923 +PORTVERSION= 1.6.924 CATEGORIES= biology perl5 MASTER_SITES= CPAN MASTER_SITE_SUBDIR= CPAN:CJFIELDS PKGNAMEPREFIX= p5- DISTNAME= BioPerl-${PORTVERSION} -MAINTAINER= wen@FreeBSD.org +MAINTAINER= perl@FreeBSD.org COMMENT= Collection of Perl modules for bioinformatics LICENSE= ART10 GPLv1 diff --git a/biology/p5-bioperl/distinfo b/biology/p5-bioperl/distinfo index 8d785377be8f..f8ce60817098 100644 --- a/biology/p5-bioperl/distinfo +++ b/biology/p5-bioperl/distinfo @@ -1,2 +1,2 @@ -SHA256 (BioPerl-1.6.923.tar.gz) = 6f6ada4ebd51ad223662e4b1ddcccc37a4fb8c47f3ecbbf060e6844d361730cd -SIZE (BioPerl-1.6.923.tar.gz) = 12562520 +SHA256 (BioPerl-1.6.924.tar.gz) = 616a7546bb3c58504de27304a0f6cb904e18b6bbcdb6a4ec8454f2bd37bb76d0 +SIZE (BioPerl-1.6.924.tar.gz) = 12623118 diff --git a/biology/p5-bioperl/files/patch-Bio-Root-Build.pm b/biology/p5-bioperl/files/patch-Bio-Root-Build.pm index 1d759f995cf6..b4433616c5fc 100644 --- a/biology/p5-bioperl/files/patch-Bio-Root-Build.pm +++ b/biology/p5-bioperl/files/patch-Bio-Root-Build.pm @@ -1,6 +1,6 @@ ---- Bio/Root/Build.pm.orig 2009-09-30 00:33:53.000000000 +0800 -+++ Bio/Root/Build.pm 2009-12-01 10:31:39.000000000 +0800 -@@ -127,49 +127,9 @@ +--- Bio/Root/Build.pm.orig 2014-07-10 22:13:23.000000000 +0200 ++++ Bio/Root/Build.pm 2014-07-24 11:55:59.000000000 +0200 +@@ -83,49 +83,9 @@ } } closedir($scripts_dir); @@ -52,11 +52,12 @@ print "\n"; } -@@ -1136,21 +1096,9 @@ +@@ -1153,22 +1113,9 @@ sub prompt_for_network { my ($self, $accept) = @_; -- my $proceed = $accept ? 0 : $self->y_n("Do you want to run tests that require connection to servers across the internet\n(likely to cause some failures)? y/n", 'n'); +- my $proceed = $accept ? 0 : $self->y_n( "Do you want to run tests that require connection to servers across the internet\n" +- . "(likely to cause some failures)? y/n", 'n'); - - if ($proceed) { - $self->notes('network' => 1); @@ -76,4 +77,4 @@ + $self->log_info(" - will not run internet-requiring tests\n"); } - # override the build script warnings flag + =head2 print_build_script |