diff options
| author | Mathieu Arnold <mat@FreeBSD.org> | 2021-04-06 11:55:50 +0000 |
|---|---|---|
| committer | Mathieu Arnold <mat@FreeBSD.org> | 2021-04-06 14:31:07 +0000 |
| commit | 305f148f482daf30dcf728039d03d019f88344eb (patch) | |
| tree | ff16a91b9ebb1e884ba29f7732b812547ea81b9e /biology | |
| parent | 5d33e045968104ac678d8b4b4ec1e8956bbf68e0 (diff) | |
| download | ports-305f148f482daf30dcf728039d03d019f88344eb.tar.gz ports-305f148f482daf30dcf728039d03d019f88344eb.zip | |
Diffstat (limited to 'biology')
187 files changed, 0 insertions, 188 deletions
diff --git a/biology/Makefile b/biology/Makefile index 3ef12bfb358a..7528f789ccfc 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -1,5 +1,3 @@ -# $FreeBSD$ -# COMMENT = Biology diff --git a/biology/abyss/Makefile b/biology/abyss/Makefile index abe802b28d62..a9e9b56b4d76 100644 --- a/biology/abyss/Makefile +++ b/biology/abyss/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= abyss DISTVERSION= 2.2.5 diff --git a/biology/ad2vcf/Makefile b/biology/ad2vcf/Makefile index e3703746263e..2eabd9aeb15e 100644 --- a/biology/ad2vcf/Makefile +++ b/biology/ad2vcf/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= ad2vcf DISTVERSION= 0.1.2 diff --git a/biology/artemis/Makefile b/biology/artemis/Makefile index 79c498c7b28e..e9be8ea2e5cc 100644 --- a/biology/artemis/Makefile +++ b/biology/artemis/Makefile @@ -1,5 +1,4 @@ # Created by: camson@bilateral.com.au -# $FreeBSD$ PORTNAME= artemis DISTVERSIONPREFIX= v diff --git a/biology/avida/Makefile b/biology/avida/Makefile index 31c1e7db7f40..c6d36fb59654 100644 --- a/biology/avida/Makefile +++ b/biology/avida/Makefile @@ -1,5 +1,4 @@ # Created by: Jeremy <karlj000@unbc.ca> -# $FreeBSD$ PORTNAME= avida PORTVERSION= 2.12.4 diff --git a/biology/babel/Makefile b/biology/babel/Makefile index c291d5c0b36e..a644a4d11817 100644 --- a/biology/babel/Makefile +++ b/biology/babel/Makefile @@ -1,5 +1,4 @@ # Created by: frankch@waru.life.nthu.edu.tw -# $FreeBSD$ PORTNAME= babel PORTVERSION= 1.6 diff --git a/biology/bamtools/Makefile b/biology/bamtools/Makefile index 70fba48bf3b4..97ac57a4c982 100644 --- a/biology/bamtools/Makefile +++ b/biology/bamtools/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bamtools DISTVERSIONPREFIX= v diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile index f70a8d828a2d..2f5d20ccc60e 100644 --- a/biology/bcftools/Makefile +++ b/biology/bcftools/Makefile @@ -1,5 +1,4 @@ # Created by: Reed A. Cartwright <cartwright@asu.edu> -# $FreeBSD$ PORTNAME= bcftools PORTVERSION= 1.12 diff --git a/biology/bedtools/Makefile b/biology/bedtools/Makefile index 93426f1b7a62..97516ed51bdc 100644 --- a/biology/bedtools/Makefile +++ b/biology/bedtools/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bedtools DISTVERSIONPREFIX= v diff --git a/biology/bioawk/Makefile b/biology/bioawk/Makefile index 6aaaa818e60e..a3fec4896878 100644 --- a/biology/bioawk/Makefile +++ b/biology/bioawk/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bioawk DISTVERSIONPREFIX= v diff --git a/biology/biococoa/Makefile b/biology/biococoa/Makefile index f6182cad2b18..c4b7c1d504e7 100644 --- a/biology/biococoa/Makefile +++ b/biology/biococoa/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= biococoa PORTVERSION= 2.2.2 diff --git a/biology/biolibc/Makefile b/biology/biolibc/Makefile index c1f3108fcd4c..a4c2b2fe58ff 100644 --- a/biology/biolibc/Makefile +++ b/biology/biolibc/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= biolibc DISTVERSION= 0.1.1 diff --git a/biology/bioparser/Makefile b/biology/bioparser/Makefile index f7f288d055f0..eda76219be08 100644 --- a/biology/bioparser/Makefile +++ b/biology/bioparser/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bioparser DISTVERSION= 3.0.12-2 diff --git a/biology/biosoup/Makefile b/biology/biosoup/Makefile index 98aaca49c42f..ff570145cf6a 100644 --- a/biology/biosoup/Makefile +++ b/biology/biosoup/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= biosoup DISTVERSION= g20201216 diff --git a/biology/bolt-lmm/Makefile b/biology/bolt-lmm/Makefile index 2ecc52e82c52..635042699c4d 100644 --- a/biology/bolt-lmm/Makefile +++ b/biology/bolt-lmm/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bolt-lmm DISTVERSION= 2.3.4 diff --git a/biology/bowtie/Makefile b/biology/bowtie/Makefile index ac49626c8c38..508c7563f29e 100644 --- a/biology/bowtie/Makefile +++ b/biology/bowtie/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bowtie DISTVERSIONPREFIX= v diff --git a/biology/bowtie2/Makefile b/biology/bowtie2/Makefile index 19b5c3765ddf..33209677374c 100644 --- a/biology/bowtie2/Makefile +++ b/biology/bowtie2/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bowtie2 DISTVERSIONPREFIX= v diff --git a/biology/bwa/Makefile b/biology/bwa/Makefile index 0925d101c312..062852d006b0 100644 --- a/biology/bwa/Makefile +++ b/biology/bwa/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= bwa PORTVERSION= 0.7.17 diff --git a/biology/canu/Makefile b/biology/canu/Makefile index ac67d2b38b37..c6a6b3e2b747 100644 --- a/biology/canu/Makefile +++ b/biology/canu/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= canu DISTVERSION= 2.1 diff --git a/biology/cd-hit/Makefile b/biology/cd-hit/Makefile index 0b2a191ff003..d1fcf305ac36 100644 --- a/biology/cd-hit/Makefile +++ b/biology/cd-hit/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= cd-hit DISTVERSIONPREFIX= V diff --git a/biology/cdbfasta/Makefile b/biology/cdbfasta/Makefile index 6f0ccc045d56..d86dd04c2c9e 100644 --- a/biology/cdbfasta/Makefile +++ b/biology/cdbfasta/Makefile @@ -1,5 +1,4 @@ # Created by: Dan Siercks <dsiercks@uwm.edu> -# $FreeBSD$ PORTNAME= cdbfasta PORTVERSION= 2010.07.22 diff --git a/biology/checkm/Makefile b/biology/checkm/Makefile index fe9ba640c641..64b6a458af2e 100644 --- a/biology/checkm/Makefile +++ b/biology/checkm/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= CheckM DISTVERSIONPREFIX= v diff --git a/biology/clustal-omega/Makefile b/biology/clustal-omega/Makefile index c258ec31559f..1a3d86346fb7 100644 --- a/biology/clustal-omega/Makefile +++ b/biology/clustal-omega/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= clustal-omega DISTVERSION= 1.2.4 diff --git a/biology/clustalw/Makefile b/biology/clustalw/Makefile index ca993dce685f..300ea99d5d25 100644 --- a/biology/clustalw/Makefile +++ b/biology/clustalw/Makefile @@ -1,5 +1,4 @@ # Created by: dbader@eece.unm.edu -# $FreeBSD$ PORTNAME= clustalw PORTVERSION= 2.1 diff --git a/biology/cufflinks/Makefile b/biology/cufflinks/Makefile index a413916455c7..dea40422df02 100644 --- a/biology/cufflinks/Makefile +++ b/biology/cufflinks/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= cufflinks DISTVERSIONPREFIX= v diff --git a/biology/cytoscape/Makefile b/biology/cytoscape/Makefile index 7a0fa2963432..1e0a0cf9d26d 100644 --- a/biology/cytoscape/Makefile +++ b/biology/cytoscape/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= cytoscape DISTVERSION= 3.6.1 diff --git a/biology/ddocent/Makefile b/biology/ddocent/Makefile index 65da902553d5..efd66880294b 100644 --- a/biology/ddocent/Makefile +++ b/biology/ddocent/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= dDocent DISTVERSIONPREFIX= v diff --git a/biology/diamond/Makefile b/biology/diamond/Makefile index c47c0f29e82d..cf8a39df70fc 100644 --- a/biology/diamond/Makefile +++ b/biology/diamond/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= diamond DISTVERSIONPREFIX= v diff --git a/biology/dsr-pdb/Makefile b/biology/dsr-pdb/Makefile index e2e084610f1a..c7a018d91242 100644 --- a/biology/dsr-pdb/Makefile +++ b/biology/dsr-pdb/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= dsr-pdb DISTVERSION= 1.0.3 diff --git a/biology/edlib/Makefile b/biology/edlib/Makefile index 5fb0caa88116..f25110575c51 100644 --- a/biology/edlib/Makefile +++ b/biology/edlib/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= edlib DISTVERSION= 1.2.6.20201202 diff --git a/biology/emboss/Makefile b/biology/emboss/Makefile index 6dadc31961e3..3fd93f959e77 100644 --- a/biology/emboss/Makefile +++ b/biology/emboss/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= emboss PORTVERSION= 6.6.0 diff --git a/biology/exonerate/Makefile b/biology/exonerate/Makefile index a5ea2fe2b654..41d7fe87714c 100644 --- a/biology/exonerate/Makefile +++ b/biology/exonerate/Makefile @@ -1,5 +1,4 @@ # Created by: Motomichi Matsuzaki <mzaki@niid.go.jp> -# $FreeBSD$ PORTNAME= exonerate PORTVERSION= 2.4.0 diff --git a/biology/fasta/Makefile b/biology/fasta/Makefile index 0ed374934edc..4cbe867093f1 100644 --- a/biology/fasta/Makefile +++ b/biology/fasta/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= fasta PORTVERSION= 21.1.1 diff --git a/biology/fasta3/Makefile b/biology/fasta3/Makefile index f288bbb7fe54..79f4c21e0c43 100644 --- a/biology/fasta3/Makefile +++ b/biology/fasta3/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= fasta3 PORTVERSION= 36.3.8 diff --git a/biology/fastahack/Makefile b/biology/fastahack/Makefile index dbec40eb0c62..dc2f96ec09ac 100644 --- a/biology/fastahack/Makefile +++ b/biology/fastahack/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= fastahack DISTVERSIONPREFIX= v diff --git a/biology/fastdnaml/Makefile b/biology/fastdnaml/Makefile index 69775afa9de2..47e9c9f4f8d9 100644 --- a/biology/fastdnaml/Makefile +++ b/biology/fastdnaml/Makefile @@ -1,5 +1,4 @@ # Created by: Motomichi Matsuzaki <mzaki@e-mail.ne.jp> -# $FreeBSD$ PORTNAME= fastdnaml PORTVERSION= 1.2.2 diff --git a/biology/fastool/Makefile b/biology/fastool/Makefile index 794b5da65d43..1b1cc3220fa4 100644 --- a/biology/fastool/Makefile +++ b/biology/fastool/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= fastool PORTVERSION= 0.1.4 diff --git a/biology/fastp/Makefile b/biology/fastp/Makefile index 05fc93bc3f69..611df1cf8236 100644 --- a/biology/fastp/Makefile +++ b/biology/fastp/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= fastp DISTVERSIONPREFIX= v diff --git a/biology/fastqc/Makefile b/biology/fastqc/Makefile index 349733f7a4e4..70d9e2a69f16 100644 --- a/biology/fastqc/Makefile +++ b/biology/fastqc/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= fastqc DISTVERSION= 0.11.9 diff --git a/biology/fasttree/Makefile b/biology/fasttree/Makefile index 6ea29894df91..6c3aa32eb106 100644 --- a/biology/fasttree/Makefile +++ b/biology/fasttree/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= FastTree DISTVERSION= 2.1.10 diff --git a/biology/fastx-toolkit/Makefile b/biology/fastx-toolkit/Makefile index eeeec056155e..0de753ef2f52 100644 --- a/biology/fastx-toolkit/Makefile +++ b/biology/fastx-toolkit/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= fastx_toolkit PORTVERSION= 0.0.14 diff --git a/biology/figtree/Makefile b/biology/figtree/Makefile index 567430b38d02..f1388ae77f13 100644 --- a/biology/figtree/Makefile +++ b/biology/figtree/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= figtree DISTVERSIONPREFIX= v diff --git a/biology/fluctuate/Makefile b/biology/fluctuate/Makefile index 368c47170403..d2b8fffb5179 100644 --- a/biology/fluctuate/Makefile +++ b/biology/fluctuate/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <wjv@FreeBSD.org> -# $FreeBSD$ PORTNAME= fluctuate PORTVERSION= 1.40 diff --git a/biology/freebayes/Makefile b/biology/freebayes/Makefile index 1d0cba6f46a8..3109876cfac8 100644 --- a/biology/freebayes/Makefile +++ b/biology/freebayes/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= freebayes DISTVERSIONPREFIX= v diff --git a/biology/garlic/Makefile b/biology/garlic/Makefile index 70ee55d2e5a6..505b32246c39 100644 --- a/biology/garlic/Makefile +++ b/biology/garlic/Makefile @@ -1,5 +1,4 @@ # Created by: maho@FreeBSD.org -# $FreeBSD$ PORTNAME= garlic PORTVERSION= 1.6 diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile index 400c9b64c989..1c4bcacbb5d1 100644 --- a/biology/gatk/Makefile +++ b/biology/gatk/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= gatk DISTVERSION= 4.2.0.0 diff --git a/biology/gcta/Makefile b/biology/gcta/Makefile index 5948e7046e70..b64ebbc47d7a 100644 --- a/biology/gcta/Makefile +++ b/biology/gcta/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= gcta DISTVERSION= 1.26.0 diff --git a/biology/gemma/Makefile b/biology/gemma/Makefile index aad0bc2e6196..12645ae26fd1 100644 --- a/biology/gemma/Makefile +++ b/biology/gemma/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= gemma DISTVERSION= 0.98.3 diff --git a/biology/generand/Makefile b/biology/generand/Makefile index c4af9671cb4d..4a447cb2c293 100644 --- a/biology/generand/Makefile +++ b/biology/generand/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= generand DISTVERSION= 0.1.2 diff --git a/biology/gff2ps/Makefile b/biology/gff2ps/Makefile index b72d3f89db2f..8b4eaefff8ad 100644 --- a/biology/gff2ps/Makefile +++ b/biology/gff2ps/Makefile @@ -1,5 +1,4 @@ # Created by: Camson Huynh <chuynh@biolateral.com.au> -# $FreeBSD$ PORTNAME= gff2ps PORTVERSION= 0.98l diff --git a/biology/gmap/Makefile b/biology/gmap/Makefile index 560212c0f752..d00f461e151d 100644 --- a/biology/gmap/Makefile +++ b/biology/gmap/Makefile @@ -1,5 +1,4 @@ # Created by: Bob Zimmermann <rpz@cse.wustl.edu> -# $FreeBSD$ PORTNAME= gmap PORTVERSION= 2020.09.12 diff --git a/biology/gperiodic/Makefile b/biology/gperiodic/Makefile index 1d1fe383ad87..860c98d786da 100644 --- a/biology/gperiodic/Makefile +++ b/biology/gperiodic/Makefile @@ -1,5 +1,4 @@ # Created by: Andrey Zakhvatov -# $FreeBSD$ # $MCom: ports/biology/gperiodic/Makefile,v 1.1 2006/09/29 23:42:13 ahze Exp $ PORTNAME= gperiodic diff --git a/biology/graphlan/Makefile b/biology/graphlan/Makefile index b933c1d1b4dc..b7835dbae894 100644 --- a/biology/graphlan/Makefile +++ b/biology/graphlan/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= graphlan DISTVERSION= 1.1.3 diff --git a/biology/grappa/Makefile b/biology/grappa/Makefile index 6fa8dae805ee..38f4050bc760 100644 --- a/biology/grappa/Makefile +++ b/biology/grappa/Makefile @@ -1,5 +1,4 @@ # Created by: dbader@ece.unm.edu -# $FreeBSD$ PORTNAME= grappa PORTVERSION= 2.0 diff --git a/biology/groopm/Makefile b/biology/groopm/Makefile index f576b18e1eb3..d922769954f5 100644 --- a/biology/groopm/Makefile +++ b/biology/groopm/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= GroopM DISTVERSION= 0.3.4 diff --git a/biology/haplohseq/Makefile b/biology/haplohseq/Makefile index 70e796ff0073..7a4829ca36dd 100644 --- a/biology/haplohseq/Makefile +++ b/biology/haplohseq/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= haplohseq DISTVERSION= 0.1.2 diff --git a/biology/hhsuite/Makefile b/biology/hhsuite/Makefile index 2658438549ca..29cb06749b49 100644 --- a/biology/hhsuite/Makefile +++ b/biology/hhsuite/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= hhsuite DISTVERSIONPREFIX= v diff --git a/biology/hisat2/Makefile b/biology/hisat2/Makefile index 4e7aaced607b..a43245d8b064 100644 --- a/biology/hisat2/Makefile +++ b/biology/hisat2/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= hisat2 DISTVERSION= 2.1.0-23 diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile index e698af778d85..ab84a5876401 100644 --- a/biology/hmmer/Makefile +++ b/biology/hmmer/Makefile @@ -1,5 +1,4 @@ # Created by: barnhart@genetics.wustl.edu -# $FreeBSD$ PORTNAME= hmmer PORTVERSION= 3.3 diff --git a/biology/htslib/Makefile b/biology/htslib/Makefile index 17779dfd3503..85e509a6435b 100644 --- a/biology/htslib/Makefile +++ b/biology/htslib/Makefile @@ -1,5 +1,4 @@ # Created by: Reed A. Cartwright <cartwright@asu.edu> -# $FreeBSD$ PORTNAME= htslib DISTVERSION= 1.12 diff --git a/biology/hyphy/Makefile b/biology/hyphy/Makefile index 852f71b8cc8e..e1b362a0aad4 100644 --- a/biology/hyphy/Makefile +++ b/biology/hyphy/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= hyphy DISTVERSION= 2.5.29 diff --git a/biology/igv/Makefile b/biology/igv/Makefile index 188c13230261..0ba00f650d05 100644 --- a/biology/igv/Makefile +++ b/biology/igv/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= igv DISTVERSIONPREFIX= v diff --git a/biology/infernal/Makefile b/biology/infernal/Makefile index 4f081db2520c..54b41cacb118 100644 --- a/biology/infernal/Makefile +++ b/biology/infernal/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= infernal PORTVERSION= 1.1.3 diff --git a/biology/iolib/Makefile b/biology/iolib/Makefile index 5c1dc3627a7e..77a1b290db78 100644 --- a/biology/iolib/Makefile +++ b/biology/iolib/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= io_lib DISTVERSIONPREFIX= ${PORTNAME}- diff --git a/biology/iqtree/Makefile b/biology/iqtree/Makefile index a7ce8069df31..addad8bb172e 100644 --- a/biology/iqtree/Makefile +++ b/biology/iqtree/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= iqtree DISTVERSIONPREFIX= v diff --git a/biology/jalview/Makefile b/biology/jalview/Makefile index 7f4e6ee265f8..33341bd764c1 100644 --- a/biology/jalview/Makefile +++ b/biology/jalview/Makefile @@ -1,5 +1,4 @@ # Created by: Fernan Aguero <fernan@iib.unsam.edu.ar> -# $FreeBSD$ PORTNAME= jalview PORTVERSION= 2.07 diff --git a/biology/jellyfish/Makefile b/biology/jellyfish/Makefile index 16592d4754b3..2e0bc33c3315 100644 --- a/biology/jellyfish/Makefile +++ b/biology/jellyfish/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= Jellyfish DISTVERSIONPREFIX= v diff --git a/biology/kallisto/Makefile b/biology/kallisto/Makefile index df090c91121c..418975019141 100644 --- a/biology/kallisto/Makefile +++ b/biology/kallisto/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= kallisto DISTVERSIONPREFIX= v diff --git a/biology/lagan/Makefile b/biology/lagan/Makefile index b4d2f7b8df37..175574e28587 100644 --- a/biology/lagan/Makefile +++ b/biology/lagan/Makefile @@ -1,5 +1,4 @@ # Created by: Fernan Aguero <fernan@iib.unsam.edu.ar> -# $FreeBSD$ PORTNAME= lagan PORTVERSION= 2.0 diff --git a/biology/lamarc/Makefile b/biology/lamarc/Makefile index 7e68cdbf69d3..686c1a87c31e 100644 --- a/biology/lamarc/Makefile +++ b/biology/lamarc/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <wjv@FreeBSD.org> -# $FreeBSD$ PORTNAME= lamarc PORTVERSION= 2.1.8 diff --git a/biology/libbigwig/Makefile b/biology/libbigwig/Makefile index ec0e43c4f3bf..07a3bce27232 100644 --- a/biology/libbigwig/Makefile +++ b/biology/libbigwig/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= libbigwig DISTVERSION= 0.4.6 diff --git a/biology/libgtextutils/Makefile b/biology/libgtextutils/Makefile index eb80110bc211..9746d9dec07e 100644 --- a/biology/libgtextutils/Makefile +++ b/biology/libgtextutils/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= libgtextutils DISTVERSION= 0.7 diff --git a/biology/libsbml/Makefile b/biology/libsbml/Makefile index 7c77ae7df54a..e31154295467 100644 --- a/biology/libsbml/Makefile +++ b/biology/libsbml/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= libsbml PORTVERSION= 5.19.0 diff --git a/biology/linux-foldingathome/Makefile b/biology/linux-foldingathome/Makefile index 298b73681a9e..75d3956dc8fa 100644 --- a/biology/linux-foldingathome/Makefile +++ b/biology/linux-foldingathome/Makefile @@ -1,5 +1,4 @@ # Created by: Yonatan <onatan@gmail.com> -# $FreeBSD$ PORTNAME= foldingathome DISTVERSION= 7.6.13 diff --git a/biology/mafft/Makefile b/biology/mafft/Makefile index da1188d8f524..8ace22cf09b4 100644 --- a/biology/mafft/Makefile +++ b/biology/mafft/Makefile @@ -1,5 +1,4 @@ # Created by: Fernan Aguero <fernan@iib.unsam.edu.ar> -# $FreeBSD$ PORTNAME= mafft PORTVERSION= 7.266 diff --git a/biology/mapm3/Makefile b/biology/mapm3/Makefile index 43c0972f95ea..9a951c92640c 100644 --- a/biology/mapm3/Makefile +++ b/biology/mapm3/Makefile @@ -1,5 +1,4 @@ # Created by: Tassilo Philipp <tphilipp@potion-studios.com> -# $FreeBSD$ PORTNAME= mapm3 PORTVERSION= 3.0 diff --git a/biology/migrate/Makefile b/biology/migrate/Makefile index b94c7ef8a18a..0e5867011a63 100644 --- a/biology/migrate/Makefile +++ b/biology/migrate/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <wjv@FreeBSD.org> -# $FreeBSD$ PORTNAME= migrate PORTVERSION= 3.6.11 diff --git a/biology/minimap2/Makefile b/biology/minimap2/Makefile index 548aa2084b45..1b5b18d27882 100644 --- a/biology/minimap2/Makefile +++ b/biology/minimap2/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= minimap2 DISTVERSIONPREFIX= v diff --git a/biology/molden/Makefile b/biology/molden/Makefile index 48cf9422f402..c1f79a1a449c 100644 --- a/biology/molden/Makefile +++ b/biology/molden/Makefile @@ -1,5 +1,4 @@ # Created by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> -# $FreeBSD$ PORTNAME= molden DISTVERSION= 5.8.2 diff --git a/biology/mopac/Makefile b/biology/mopac/Makefile index 693b25e745ff..be4d5d0d4924 100644 --- a/biology/mopac/Makefile +++ b/biology/mopac/Makefile @@ -1,5 +1,4 @@ # Created by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> -# $FreeBSD$ PORTNAME= mopac PORTVERSION= 7.${MOPAC_SUBVERSION} diff --git a/biology/mothur/Makefile b/biology/mothur/Makefile index 04886ae666cb..75ab13385989 100644 --- a/biology/mothur/Makefile +++ b/biology/mothur/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= mothur DISTVERSIONPREFIX= v diff --git a/biology/mrbayes/Makefile b/biology/mrbayes/Makefile index 7c4e0a7a537e..2dc794bfc40a 100644 --- a/biology/mrbayes/Makefile +++ b/biology/mrbayes/Makefile @@ -1,5 +1,4 @@ # Created by: mzaki@biol.s.u-tokyo.ac.jp -# $FreeBSD$ PORTNAME= mrbayes DISTVERSIONPREFIX= v diff --git a/biology/mummer/Makefile b/biology/mummer/Makefile index 3053bb3ef2b8..caf51c66a7a7 100644 --- a/biology/mummer/Makefile +++ b/biology/mummer/Makefile @@ -1,5 +1,4 @@ # Created by: Tony Maher -# $FreeBSD$ PORTNAME= mummer DISTVERSIONPREFIX= v diff --git a/biology/muscle/Makefile b/biology/muscle/Makefile index 8be02cad08c4..41766d51a72c 100644 --- a/biology/muscle/Makefile +++ b/biology/muscle/Makefile @@ -1,5 +1,4 @@ # Created by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp> -# $FreeBSD$ PORTNAME= muscle PORTVERSION= 3.8.1551 diff --git a/biology/ncbi-blast+/Makefile b/biology/ncbi-blast+/Makefile index f9dc2ba18175..a8015939346f 100644 --- a/biology/ncbi-blast+/Makefile +++ b/biology/ncbi-blast+/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= ncbi-blast+ DISTVERSION= 2.11.0 diff --git a/biology/ncbi-cxx-toolkit/Makefile b/biology/ncbi-cxx-toolkit/Makefile index 57d36a0e8eeb..5a66beb0b60d 100644 --- a/biology/ncbi-cxx-toolkit/Makefile +++ b/biology/ncbi-cxx-toolkit/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= ncbi-cxx-toolkit DISTVERSION= 22_0_0 diff --git a/biology/ncbi-toolkit/Makefile b/biology/ncbi-toolkit/Makefile index 81440aa5e309..ffae0c32fe3c 100644 --- a/biology/ncbi-toolkit/Makefile +++ b/biology/ncbi-toolkit/Makefile @@ -1,5 +1,4 @@ # Created by: tonym -# $FreeBSD$ PORTNAME= ncbi-toolkit DISTVERSION= 2017.01.06 # containing BLAST v2.2.27 (? is this true) diff --git a/biology/ngs-sdk/Makefile b/biology/ngs-sdk/Makefile index 12a5bf82ac16..7c4199fcd783 100644 --- a/biology/ngs-sdk/Makefile +++ b/biology/ngs-sdk/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= ngs DISTVERSION= 2.11.0 diff --git a/biology/p5-AcePerl/Makefile b/biology/p5-AcePerl/Makefile index f392a0786013..8b3b051a37f7 100644 --- a/biology/p5-AcePerl/Makefile +++ b/biology/p5-AcePerl/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= AcePerl PORTVERSION= 1.92 diff --git a/biology/p5-Bio-ASN1-EntrezGene/Makefile b/biology/p5-Bio-ASN1-EntrezGene/Makefile index 3ae88638e370..e6a362aeefc3 100644 --- a/biology/p5-Bio-ASN1-EntrezGene/Makefile +++ b/biology/p5-Bio-ASN1-EntrezGene/Makefile @@ -1,5 +1,4 @@ # Created by: Mauricio Herrera Cuadra <mauricio@arareko.net> -# $FreeBSD$ PORTNAME= Bio-ASN1-EntrezGene PORTVERSION= 1.73 diff --git a/biology/p5-Bio-Cluster/Makefile b/biology/p5-Bio-Cluster/Makefile index dcca960f2b3c..0416f878e37b 100644 --- a/biology/p5-Bio-Cluster/Makefile +++ b/biology/p5-Bio-Cluster/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-Cluster PORTVERSION= 1.7.3 diff --git a/biology/p5-Bio-Coordinate/Makefile b/biology/p5-Bio-Coordinate/Makefile index 2e56c7a14286..f81fbb662c30 100644 --- a/biology/p5-Bio-Coordinate/Makefile +++ b/biology/p5-Bio-Coordinate/Makefile @@ -1,5 +1,4 @@ # Created by: Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-Coordinate PORTVERSION= 1.007001 diff --git a/biology/p5-Bio-DB-EMBL/Makefile b/biology/p5-Bio-DB-EMBL/Makefile index 7df8955f969a..65558a87888d 100644 --- a/biology/p5-Bio-DB-EMBL/Makefile +++ b/biology/p5-Bio-DB-EMBL/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-DB-EMBL PORTVERSION= 1.7.4 diff --git a/biology/p5-Bio-DB-NCBIHelper/Makefile b/biology/p5-Bio-DB-NCBIHelper/Makefile index f28e3dbac39c..5791e7e5be02 100644 --- a/biology/p5-Bio-DB-NCBIHelper/Makefile +++ b/biology/p5-Bio-DB-NCBIHelper/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-DB-NCBIHelper PORTVERSION= 1.7.6 diff --git a/biology/p5-Bio-Das-Lite/Makefile b/biology/p5-Bio-Das-Lite/Makefile index 330ff878a6f8..73b0d1f65d4e 100644 --- a/biology/p5-Bio-Das-Lite/Makefile +++ b/biology/p5-Bio-Das-Lite/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wen@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-Das-Lite PORTVERSION= 2.11 diff --git a/biology/p5-Bio-Das/Makefile b/biology/p5-Bio-Das/Makefile index b8ef669e867e..5ccbb5c42cc3 100644 --- a/biology/p5-Bio-Das/Makefile +++ b/biology/p5-Bio-Das/Makefile @@ -1,5 +1,4 @@ # Created by: Razi Khaja <razi@genet.sickkids.on.ca> -# $FreeBSD$ PORTNAME= Bio-Das PORTVERSION= 1.17 diff --git a/biology/p5-Bio-FeatureIO/Makefile b/biology/p5-Bio-FeatureIO/Makefile index a4d4ebfd1aba..26e0f9f6c6b3 100644 --- a/biology/p5-Bio-FeatureIO/Makefile +++ b/biology/p5-Bio-FeatureIO/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-FeatureIO PORTVERSION= 1.6.905 diff --git a/biology/p5-Bio-GFF3/Makefile b/biology/p5-Bio-GFF3/Makefile index 25fe0509e0e8..ac0b9f0ecf6b 100644 --- a/biology/p5-Bio-GFF3/Makefile +++ b/biology/p5-Bio-GFF3/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= Bio-GFF3 PORTVERSION= 2.0 diff --git a/biology/p5-Bio-Glite/Makefile b/biology/p5-Bio-Glite/Makefile index 58be4ad54db5..d80c6fefe950 100644 --- a/biology/p5-Bio-Glite/Makefile +++ b/biology/p5-Bio-Glite/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= Bio-Glite PORTVERSION= 0.10 diff --git a/biology/p5-Bio-Graphics/Makefile b/biology/p5-Bio-Graphics/Makefile index 9fc0800d336e..27f4b0aad89e 100644 --- a/biology/p5-Bio-Graphics/Makefile +++ b/biology/p5-Bio-Graphics/Makefile @@ -1,5 +1,4 @@ # Created by: wen@FreeBSD.org -# $FreeBSD$ PORTNAME= Bio-Graphics PORTVERSION= 2.40 diff --git a/biology/p5-Bio-MAGETAB/Makefile b/biology/p5-Bio-MAGETAB/Makefile index f16fc978680e..f145366b25d8 100644 --- a/biology/p5-Bio-MAGETAB/Makefile +++ b/biology/p5-Bio-MAGETAB/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= Bio-MAGETAB PORTVERSION= 1.31 diff --git a/biology/p5-Bio-NEXUS/Makefile b/biology/p5-Bio-NEXUS/Makefile index 2559e08c1512..73f484e93f8a 100644 --- a/biology/p5-Bio-NEXUS/Makefile +++ b/biology/p5-Bio-NEXUS/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= Bio-NEXUS PORTVERSION= 0.78 diff --git a/biology/p5-Bio-Phylo/Makefile b/biology/p5-Bio-Phylo/Makefile index 68512e73a70e..4242851d0119 100644 --- a/biology/p5-Bio-Phylo/Makefile +++ b/biology/p5-Bio-Phylo/Makefile @@ -1,5 +1,4 @@ # Created by: Aaron Dalton <aaron@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-Phylo PORTVERSION= 2.0.1 diff --git a/biology/p5-Bio-SCF/Makefile b/biology/p5-Bio-SCF/Makefile index 9e310c111f13..1a1aaef6e60a 100644 --- a/biology/p5-Bio-SCF/Makefile +++ b/biology/p5-Bio-SCF/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= Bio-SCF PORTVERSION= 1.03 diff --git a/biology/p5-Bio-Variation/Makefile b/biology/p5-Bio-Variation/Makefile index bcec1317a0e9..3794ca64e3c2 100644 --- a/biology/p5-Bio-Variation/Makefile +++ b/biology/p5-Bio-Variation/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= Bio-Variation PORTVERSION= 1.7.5 diff --git a/biology/p5-BioPerl-Run/Makefile b/biology/p5-BioPerl-Run/Makefile index e72f084bbfe5..a4c7a1246fa9 100644 --- a/biology/p5-BioPerl-Run/Makefile +++ b/biology/p5-BioPerl-Run/Makefile @@ -1,5 +1,4 @@ # Created by: Mauricio Herrera Cuadra <mauricio@arareko.net> -# $FreeBSD$ PORTNAME= BioPerl-Run PORTVERSION= 1.007003 diff --git a/biology/p5-BioPerl/Makefile b/biology/p5-BioPerl/Makefile index f39e46d01e10..64b0a207811e 100644 --- a/biology/p5-BioPerl/Makefile +++ b/biology/p5-BioPerl/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= BioPerl PORTVERSION= 1.007007 diff --git a/biology/p5-TrimGalore/Makefile b/biology/p5-TrimGalore/Makefile index d1994b0e5c69..a2edbf6d5609 100644 --- a/biology/p5-TrimGalore/Makefile +++ b/biology/p5-TrimGalore/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= TrimGalore DISTVERSION= 0.6.5 diff --git a/biology/p5-transdecoder/Makefile b/biology/p5-transdecoder/Makefile index 09c87b259313..b5575f733953 100644 --- a/biology/p5-transdecoder/Makefile +++ b/biology/p5-transdecoder/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= transdecoder DISTVERSIONPREFIX= TransDecoder-v diff --git a/biology/paml/Makefile b/biology/paml/Makefile index 997dc37657f3..39c03f19b24d 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -1,5 +1,4 @@ # Created by: dbader@eece.unm.edu -# $FreeBSD$ PORTNAME= paml PORTVERSION= 4.9j diff --git a/biology/pbbam/Makefile b/biology/pbbam/Makefile index 0b68e2c346d0..ef0fd1bd2539 100644 --- a/biology/pbbam/Makefile +++ b/biology/pbbam/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pbbam DISTVERSION= 0.18.0 # Test with biology/unanimity before upgrading! diff --git a/biology/pbseqan/Makefile b/biology/pbseqan/Makefile index e8e43c6717e9..3dc2d4f8a968 100644 --- a/biology/pbseqan/Makefile +++ b/biology/pbseqan/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pbseqan DISTVERSION= g20171011 diff --git a/biology/pear-merger/Makefile b/biology/pear-merger/Makefile index d1f497a69624..5dd65461d4ff 100644 --- a/biology/pear-merger/Makefile +++ b/biology/pear-merger/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ # Newer versions require registration to download and the site is unreliable. diff --git a/biology/phrap/Makefile b/biology/phrap/Makefile index 294d3f0d168c..81facf8d9681 100644 --- a/biology/phrap/Makefile +++ b/biology/phrap/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= phrap PORTVERSION= 1.090518 diff --git a/biology/phred/Makefile b/biology/phred/Makefile index a272cca4f3be..8872c6e7add5 100644 --- a/biology/phred/Makefile +++ b/biology/phred/Makefile @@ -1,5 +1,4 @@ # Created by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp> -# $FreeBSD$ PORTNAME= phred PORTVERSION= 0.020425.c diff --git a/biology/phylip/Makefile b/biology/phylip/Makefile index b04bd95a153f..a26e625e2c1b 100644 --- a/biology/phylip/Makefile +++ b/biology/phylip/Makefile @@ -1,5 +1,4 @@ # Created by: David A. Bader <dbader@eece.unm.edu> -# $FreeBSD$ PORTNAME= phylip PORTVERSION= 3.697 diff --git a/biology/phyml/Makefile b/biology/phyml/Makefile index e2383eaded5f..8eddba28c8e2 100644 --- a/biology/phyml/Makefile +++ b/biology/phyml/Makefile @@ -1,5 +1,4 @@ # Created by: ballen -# $FreeBSD$ PORTNAME= phyml DISTVERSIONPREFIX= v diff --git a/biology/picard-tools/Makefile b/biology/picard-tools/Makefile index 8faf237344bd..28887777f71f 100644 --- a/biology/picard-tools/Makefile +++ b/biology/picard-tools/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= picard DISTVERSION= 2.22.9 diff --git a/biology/plink/Makefile b/biology/plink/Makefile index 8467defbc94b..a74b81d8bb9b 100644 --- a/biology/plink/Makefile +++ b/biology/plink/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= plink DISTVERSIONPREFIX= v diff --git a/biology/pooler/Makefile b/biology/pooler/Makefile index dae7df86c2fc..114a06a26562 100644 --- a/biology/pooler/Makefile +++ b/biology/pooler/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pooler DISTVERSIONPREFIX= v diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile index 2f294a9ae2e9..90fbb38e4e99 100644 --- a/biology/primer3/Makefile +++ b/biology/primer3/Makefile @@ -1,5 +1,4 @@ # Created by: Tony Maher <tonym@biolateral.com.au> -# $FreeBSD$ PORTNAME= primer3 PORTVERSION= 2.3.6 diff --git a/biology/prodigal/Makefile b/biology/prodigal/Makefile index e06e44b16b77..8f0582e6f0c1 100644 --- a/biology/prodigal/Makefile +++ b/biology/prodigal/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= prodigal DISTVERSIONPREFIX= v diff --git a/biology/prodigy-lig/Makefile b/biology/prodigy-lig/Makefile index cedcf9883503..888d225d9e5c 100644 --- a/biology/prodigy-lig/Makefile +++ b/biology/prodigy-lig/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= prodigy-lig DISTVERSIONPREFIX= v diff --git a/biology/protomol/Makefile b/biology/protomol/Makefile index 66069b5ca75f..a4c6a353495d 100644 --- a/biology/protomol/Makefile +++ b/biology/protomol/Makefile @@ -1,5 +1,4 @@ # Created by: Sangwoo Shim <sangwoos@gmail.com> -# $FreeBSD$ PORTNAME= protomol PORTVERSION= 2.0.3 diff --git a/biology/psi88/Makefile b/biology/psi88/Makefile index 5a8e5869a76e..7d689b6b2c81 100644 --- a/biology/psi88/Makefile +++ b/biology/psi88/Makefile @@ -1,5 +1,4 @@ # Created by: Ryo MIYAMOTO -# $FreeBSD$ PORTNAME= psi88 PORTVERSION= 1.0 diff --git a/biology/py-Genesis-PyAPI/Makefile b/biology/py-Genesis-PyAPI/Makefile index 093ded1dfb39..e48c8f11a94f 100644 --- a/biology/py-Genesis-PyAPI/Makefile +++ b/biology/py-Genesis-PyAPI/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= Genesis-PyAPI DISTVERSION= 1.2.1 diff --git a/biology/py-biom-format/Makefile b/biology/py-biom-format/Makefile index f169c4883315..c44eea2387ee 100644 --- a/biology/py-biom-format/Makefile +++ b/biology/py-biom-format/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= biom-format PORTVERSION= 2.1.10 diff --git a/biology/py-biopython/Makefile b/biology/py-biopython/Makefile index f56438bb0dcd..ec04889a1e89 100644 --- a/biology/py-biopython/Makefile +++ b/biology/py-biopython/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= biopython DISTVERSION= 1.78 diff --git a/biology/py-bx-python/Makefile b/biology/py-bx-python/Makefile index 716f9ef498b1..bd6def9b1795 100644 --- a/biology/py-bx-python/Makefile +++ b/biology/py-bx-python/Makefile @@ -1,5 +1,4 @@ # Created by: Yuri Victorovich <yuri@rawbw.com> -# $FreeBSD$ PORTNAME= bx-python DISTVERSION= 0.8.10 diff --git a/biology/py-cutadapt/Makefile b/biology/py-cutadapt/Makefile index 4f35dc13bae2..ebe1d81373e2 100644 --- a/biology/py-cutadapt/Makefile +++ b/biology/py-cutadapt/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= cutadapt DISTVERSION= 3.3 diff --git a/biology/py-dnaio/Makefile b/biology/py-dnaio/Makefile index ed62f76a838b..fa86fc8f79af 100644 --- a/biology/py-dnaio/Makefile +++ b/biology/py-dnaio/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= dnaio DISTVERSION= 0.5.0 # py-cutadapt 3.2 requires 0.5.x diff --git a/biology/py-ete3/Makefile b/biology/py-ete3/Makefile index 2716dd15131f..b400604838ba 100644 --- a/biology/py-ete3/Makefile +++ b/biology/py-ete3/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= ete3 DISTVERSION= 3.1.2 diff --git a/biology/py-gffutils/Makefile b/biology/py-gffutils/Makefile index 5bf603f033cd..667f0bea625e 100644 --- a/biology/py-gffutils/Makefile +++ b/biology/py-gffutils/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= gffutils DISTVERSION= 0.10.1 diff --git a/biology/py-gtfparse/Makefile b/biology/py-gtfparse/Makefile index 2b5f0d258ac1..492f67fb80e5 100644 --- a/biology/py-gtfparse/Makefile +++ b/biology/py-gtfparse/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= gtfparse DISTVERSION= 1.2.1 diff --git a/biology/py-hits/Makefile b/biology/py-hits/Makefile index bf0239c723e6..d67f308cdb47 100644 --- a/biology/py-hits/Makefile +++ b/biology/py-hits/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= hits PORTVERSION= 0.1 diff --git a/biology/py-loompy/Makefile b/biology/py-loompy/Makefile index 430963e3325a..b150d89cd5b1 100644 --- a/biology/py-loompy/Makefile +++ b/biology/py-loompy/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= loompy DISTVERSION= 3.0.6 diff --git a/biology/py-macs2/Makefile b/biology/py-macs2/Makefile index 04de15a42e81..7aced2a010d2 100644 --- a/biology/py-macs2/Makefile +++ b/biology/py-macs2/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= macs2 DISTVERSIONPREFIX= v diff --git a/biology/py-multiqc/Makefile b/biology/py-multiqc/Makefile index 2c3da939f111..228c79e18a94 100644 --- a/biology/py-multiqc/Makefile +++ b/biology/py-multiqc/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= multiqc DISTVERSION= 1.10 diff --git a/biology/py-orange3-bioinformatics/Makefile b/biology/py-orange3-bioinformatics/Makefile index 7571468f1699..4596c21df893 100644 --- a/biology/py-orange3-bioinformatics/Makefile +++ b/biology/py-orange3-bioinformatics/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= orange3-bioinformatics DISTVERSION= 3.2.2 diff --git a/biology/py-orange3-single-cell/Makefile b/biology/py-orange3-single-cell/Makefile index dc2265faeafa..42ffe42482f6 100644 --- a/biology/py-orange3-single-cell/Makefile +++ b/biology/py-orange3-single-cell/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= orange3-single-cell DISTVERSION= 0.8.2 diff --git a/biology/py-pandas-charm/Makefile b/biology/py-pandas-charm/Makefile index 5525990c880b..2b9d01cd150d 100644 --- a/biology/py-pandas-charm/Makefile +++ b/biology/py-pandas-charm/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pandas-charm DISTVERSION= 0.3.0 diff --git a/biology/py-pyfaidx/Makefile b/biology/py-pyfaidx/Makefile index 9d977925dc48..ea51b5bf2400 100644 --- a/biology/py-pyfaidx/Makefile +++ b/biology/py-pyfaidx/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pyfaidx DISTVERSION= 0.5.9.2 diff --git a/biology/py-pysam/Makefile b/biology/py-pysam/Makefile index 9bc3b00b2ebe..62d4852ba20e 100644 --- a/biology/py-pysam/Makefile +++ b/biology/py-pysam/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= pysam DISTVERSION= 0.16.0.1 diff --git a/biology/py-scikit-bio/Makefile b/biology/py-scikit-bio/Makefile index c0d6ccdb2844..ecac0afacd6e 100644 --- a/biology/py-scikit-bio/Makefile +++ b/biology/py-scikit-bio/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= scikit-bio PORTVERSION= 0.5.6 diff --git a/biology/py-xenaPython/Makefile b/biology/py-xenaPython/Makefile index 1084ac23d73f..038a26df1c3a 100644 --- a/biology/py-xenaPython/Makefile +++ b/biology/py-xenaPython/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= xenaPython DISTVERSION= 1.0.14 diff --git a/biology/pyfasta/Makefile b/biology/pyfasta/Makefile index 12286d3d0eac..8c9c055b0a4c 100644 --- a/biology/pyfasta/Makefile +++ b/biology/pyfasta/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wen@FreeBSD.org> -# $FreeBSD$ PORTNAME= pyfasta PORTVERSION= 0.5.2 diff --git a/biology/python-nexus/Makefile b/biology/python-nexus/Makefile index 7ac2cdc3a32a..b3511a65046e 100644 --- a/biology/python-nexus/Makefile +++ b/biology/python-nexus/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wen@FreeBSD.org> -# $FreeBSD$ PORTNAME= python-nexus PORTVERSION= 1.63 diff --git a/biology/rainbow/Makefile b/biology/rainbow/Makefile index 0fe16b14a1e8..8fbbd5e6d6ff 100644 --- a/biology/rainbow/Makefile +++ b/biology/rainbow/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= rainbow DISTVERSION= 2.0.4 diff --git a/biology/rampler/Makefile b/biology/rampler/Makefile index 9b0fe815647f..102720c30d7d 100644 --- a/biology/rampler/Makefile +++ b/biology/rampler/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= rampler DISTVERSION= 2.0.0 diff --git a/biology/recombine/Makefile b/biology/recombine/Makefile index f734b9590cbc..3e587211bb2f 100644 --- a/biology/recombine/Makefile +++ b/biology/recombine/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <wjv@FreeBSD.org> -# $FreeBSD$ PORTNAME= recombine PORTVERSION= 1.41 diff --git a/biology/ruby-bio/Makefile b/biology/ruby-bio/Makefile index 23b6daa8a23e..59f60cc2f1f6 100644 --- a/biology/ruby-bio/Makefile +++ b/biology/ruby-bio/Makefile @@ -1,5 +1,4 @@ # Created by: Akinori MUSHA aka knu <knu@idaemons.org> -# $FreeBSD$ PORTNAME= bio PORTVERSION= 1.5.1 diff --git a/biology/rubygem-bio-executables/Makefile b/biology/rubygem-bio-executables/Makefile index 2aaed6720226..cf25234ac8a6 100644 --- a/biology/rubygem-bio-executables/Makefile +++ b/biology/rubygem-bio-executables/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= bio-executables PORTVERSION= 1.0.0 diff --git a/biology/rubygem-bio-old-biofetch-emulator/Makefile b/biology/rubygem-bio-old-biofetch-emulator/Makefile index 7a1d158c7d73..3915f9c32906 100644 --- a/biology/rubygem-bio-old-biofetch-emulator/Makefile +++ b/biology/rubygem-bio-old-biofetch-emulator/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= bio-old-biofetch-emulator PORTVERSION= 1.0.0 diff --git a/biology/rubygem-bio-shell/Makefile b/biology/rubygem-bio-shell/Makefile index ab2b01b3eb1a..8cc43f37f60d 100644 --- a/biology/rubygem-bio-shell/Makefile +++ b/biology/rubygem-bio-shell/Makefile @@ -1,5 +1,4 @@ # Created by: Po-Chuan Hsieh <sunpoet@FreeBSD.org> -# $FreeBSD$ PORTNAME= bio-shell PORTVERSION= 1.0.0 diff --git a/biology/rubygem-bio/Makefile b/biology/rubygem-bio/Makefile index 78f34ead98d9..3d7b2f9fd25b 100644 --- a/biology/rubygem-bio/Makefile +++ b/biology/rubygem-bio/Makefile @@ -1,5 +1,4 @@ # Created by: Wen Heping <wenheping@gmail.com> -# $FreeBSD$ PORTNAME= bio PORTVERSION= 2.0.1 diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile index 55bfe3dd5c12..726a83ffcd7d 100644 --- a/biology/samtools/Makefile +++ b/biology/samtools/Makefile @@ -1,5 +1,4 @@ # Created by: Reed A. Cartwright <cartwright@asu.edu> -# $FreeBSD$ PORTNAME= samtools DISTVERSION= 1.12 diff --git a/biology/scrm/Makefile b/biology/scrm/Makefile index 0e8201847790..30c2bf5d1952 100644 --- a/biology/scrm/Makefile +++ b/biology/scrm/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= scrm DISTVERSIONPREFIX= v diff --git a/biology/seaview/Makefile b/biology/seaview/Makefile index 460c0cf54562..922134459401 100644 --- a/biology/seaview/Makefile +++ b/biology/seaview/Makefile @@ -1,5 +1,4 @@ # Created by: frankch@waru.life.nthu.edu.tw -# $FreeBSD$ PORTNAME= seaview PORTVERSION= 5.0.4 diff --git a/biology/seqan-apps/Makefile b/biology/seqan-apps/Makefile index 1b60f368aa49..176996fc65ef 100644 --- a/biology/seqan-apps/Makefile +++ b/biology/seqan-apps/Makefile @@ -1,5 +1,4 @@ # Created by: Hannes Hauswedell <h2+fbsdports@fsfe.org> -# $FreeBSD$ PORTNAME= seqan-apps DISTVERSIONPREFIX= seqan-v diff --git a/biology/seqan/Makefile b/biology/seqan/Makefile index 71f4951ffb23..7ed81b7b9283 100644 --- a/biology/seqan/Makefile +++ b/biology/seqan/Makefile @@ -1,5 +1,4 @@ # Created by: h2 -# $FreeBSD$ PORTNAME= seqan DISTVERSION= 2.4.0 diff --git a/biology/seqan1/Makefile b/biology/seqan1/Makefile index df8fb2117675..5ca1ae722732 100644 --- a/biology/seqan1/Makefile +++ b/biology/seqan1/Makefile @@ -1,5 +1,4 @@ # Created by: h2 -# $FreeBSD$ PORTNAME= seqan PORTVERSION= 1.3.1 diff --git a/biology/seqio/Makefile b/biology/seqio/Makefile index d38de3c01144..47d42f0980ae 100644 --- a/biology/seqio/Makefile +++ b/biology/seqio/Makefile @@ -1,5 +1,4 @@ # Created by: Tony Maher -# $FreeBSD$ PORTNAME= seqio PORTVERSION= 1.2.2 diff --git a/biology/seqtk/Makefile b/biology/seqtk/Makefile index b625d561742f..d1c0d5888e1c 100644 --- a/biology/seqtk/Makefile +++ b/biology/seqtk/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= seqtk DISTVERSION= 1.2-8 diff --git a/biology/sim4/Makefile b/biology/sim4/Makefile index 21844aea6886..de34ed4a56f3 100644 --- a/biology/sim4/Makefile +++ b/biology/sim4/Makefile @@ -1,5 +1,4 @@ # Created by: Johann Visagie <johann@egenetics.com> -# $FreeBSD$ PORTNAME= sim4 PORTVERSION= 2003.09.21 diff --git a/biology/slclust/Makefile b/biology/slclust/Makefile index 874b00f4afa2..cc8936c2c92e 100644 --- a/biology/slclust/Makefile +++ b/biology/slclust/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= slclust PORTVERSION= 2010.02.02 diff --git a/biology/smithwaterman/Makefile b/biology/smithwaterman/Makefile index c43ae146e3ce..6f0d9c7cabea 100644 --- a/biology/smithwaterman/Makefile +++ b/biology/smithwaterman/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= smithwaterman DISTVERSION= g20160702 diff --git a/biology/spoa/Makefile b/biology/spoa/Makefile index 6a1908b3ff73..0698419832c7 100644 --- a/biology/spoa/Makefile +++ b/biology/spoa/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= spoa DISTVERSION= 4.0.7 diff --git a/biology/stacks/Makefile b/biology/stacks/Makefile index 4ce7729e121f..78da9d8abc49 100644 --- a/biology/stacks/Makefile +++ b/biology/stacks/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= stacks DISTVERSION= 2.4 diff --git a/biology/star/Makefile b/biology/star/Makefile index 29d08668449e..5eb6e6f8ecbb 100644 --- a/biology/star/Makefile +++ b/biology/star/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= STAR DISTVERSION= 2.7.3a diff --git a/biology/stringtie/Makefile b/biology/stringtie/Makefile index 16a5f2ad0c65..b841c5a8f845 100644 --- a/biology/stringtie/Makefile +++ b/biology/stringtie/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= stringtie DISTVERSION= 2.1.1 diff --git a/biology/subread/Makefile b/biology/subread/Makefile index 46e73025ba42..ba6d1e86887f 100644 --- a/biology/subread/Makefile +++ b/biology/subread/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= subread DISTVERSION= 2.0.2 diff --git a/biology/tRNAscan-SE/Makefile b/biology/tRNAscan-SE/Makefile index d819a4c376e5..95121657aa0c 100644 --- a/biology/tRNAscan-SE/Makefile +++ b/biology/tRNAscan-SE/Makefile @@ -1,5 +1,4 @@ # Created by: chuynh@biolateral.com.au -# $FreeBSD$ PORTNAME= tRNAscan-SE PORTVERSION= 2.0.5 diff --git a/biology/tabixpp/Makefile b/biology/tabixpp/Makefile index d1230fae4052..48d504146e73 100644 --- a/biology/tabixpp/Makefile +++ b/biology/tabixpp/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= tabixpp DISTVERSIONPREFIX= v diff --git a/biology/treekin/Makefile b/biology/treekin/Makefile index 59866f4b872d..afed6f1f026c 100644 --- a/biology/treekin/Makefile +++ b/biology/treekin/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= treekin DISTVERSION= 0.5.1 diff --git a/biology/treepuzzle/Makefile b/biology/treepuzzle/Makefile index e8bd4550e4e2..32e003d8539a 100644 --- a/biology/treepuzzle/Makefile +++ b/biology/treepuzzle/Makefile @@ -1,5 +1,4 @@ # Created by: lentferj -# $FreeBSD$ PORTNAME= treepuzzle PORTVERSION= 5.2 diff --git a/biology/trimadap/Makefile b/biology/trimadap/Makefile index 6c58fc954970..0c9d54b1b5db 100644 --- a/biology/trimadap/Makefile +++ b/biology/trimadap/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= trimadap DISTVERSION= 0.1-3 diff --git a/biology/trimmomatic/Makefile b/biology/trimmomatic/Makefile index ed58ce869808..8f423c8eb006 100644 --- a/biology/trimmomatic/Makefile +++ b/biology/trimmomatic/Makefile @@ -1,5 +1,4 @@ # Created by: Dan Siercks <dsiercks@uwm.edu> -# $FreeBSD$ PORTNAME= trimmomatic DISTVERSION= 0.39 diff --git a/biology/ugene/Makefile b/biology/ugene/Makefile index fc71d7f3537f..21889e63eaee 100644 --- a/biology/ugene/Makefile +++ b/biology/ugene/Makefile @@ -1,5 +1,4 @@ # Created by: Hannes Hauswedell <h2+fbsdports@fsfe.org> -# $FreeBSD$ PORTNAME= ugene PORTVERSION= 38.0 diff --git a/biology/vcf-split/Makefile b/biology/vcf-split/Makefile index 16a46e71b4a0..0f9fde5913b8 100644 --- a/biology/vcf-split/Makefile +++ b/biology/vcf-split/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vcf-split DISTVERSION= 0.1.1 diff --git a/biology/vcf2hap/Makefile b/biology/vcf2hap/Makefile index bb4a4bd88103..55d960ec4372 100644 --- a/biology/vcf2hap/Makefile +++ b/biology/vcf2hap/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vcf2hap DISTVERSION= 0.1.2 diff --git a/biology/vcflib/Makefile b/biology/vcflib/Makefile index b985c0d3fdbf..d28fdb59c8e4 100644 --- a/biology/vcflib/Makefile +++ b/biology/vcflib/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vcflib DISTVERSIONPREFIX= v diff --git a/biology/vcftools/Makefile b/biology/vcftools/Makefile index 11043c5d3d11..982aabac382d 100644 --- a/biology/vcftools/Makefile +++ b/biology/vcftools/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vcftools PORTVERSION= 0.1.16 diff --git a/biology/velvet/Makefile b/biology/velvet/Makefile index d57d74084880..65cbb1adaa43 100644 --- a/biology/velvet/Makefile +++ b/biology/velvet/Makefile @@ -1,5 +1,4 @@ # Created by: Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> -# $FreeBSD$ PORTNAME= velvet PORTVERSION= 1.2.10 diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile index 574f24100b2e..0a5d06488a4a 100644 --- a/biology/viennarna/Makefile +++ b/biology/viennarna/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= viennarna DISTVERSION= 2.4.17 diff --git a/biology/vsearch/Makefile b/biology/vsearch/Makefile index 89285b62f813..72f0a40af1b3 100644 --- a/biology/vsearch/Makefile +++ b/biology/vsearch/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vsearch DISTVERSIONPREFIX= v diff --git a/biology/vt/Makefile b/biology/vt/Makefile index 95d9ed794d9d..2d48f2395b1e 100644 --- a/biology/vt/Makefile +++ b/biology/vt/Makefile @@ -1,4 +1,3 @@ -# $FreeBSD$ PORTNAME= vt DISTVERSION= 0.57721 diff --git a/biology/wise/Makefile b/biology/wise/Makefile index 651c8a402ec0..4aa45603447e 100644 --- a/biology/wise/Makefile +++ b/biology/wise/Makefile @@ -1,5 +1,4 @@ # Created by: Tony Maher <tonym@biolateral.com.au> -# $FreeBSD$ PORTNAME= wise PORTVERSION= 2.4.1 |