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authorAntoine Brodin <antoine@FreeBSD.org>2020-12-28 23:02:12 +0000
committerAntoine Brodin <antoine@FreeBSD.org>2020-12-28 23:02:12 +0000
commitaa7a6c429ea62d972467d6755fa7a6f52256b452 (patch)
tree3c451883d3bd4d2ffe401b2b6aee58825505d145 /biology
parentc3b3e6a10d663bc2672cdd4bf46943046d03ecba (diff)
downloadports-aa7a6c429ea62d972467d6755fa7a6f52256b452.tar.gz
ports-aa7a6c429ea62d972467d6755fa7a6f52256b452.zip
Drop python 2.7 support from a few ports
With hat: portmgr
Notes
Notes: svn path=/head/; revision=559531
Diffstat (limited to 'biology')
-rw-r--r--biology/py-Genesis-PyAPI/Makefile2
-rw-r--r--biology/py-bx-python/Makefile2
-rw-r--r--biology/py-gtfparse/Makefile2
-rw-r--r--biology/py-pandas-charm/Makefile2
-rw-r--r--biology/py-pyfaidx/Makefile2
-rw-r--r--biology/py-pysam/Makefile2
-rw-r--r--biology/py-xenaPython/Makefile2
-rw-r--r--biology/pyfasta/Makefile2
-rw-r--r--biology/python-nexus/Makefile2
9 files changed, 9 insertions, 9 deletions
diff --git a/biology/py-Genesis-PyAPI/Makefile b/biology/py-Genesis-PyAPI/Makefile
index a4797fa56624..093ded1dfb39 100644
--- a/biology/py-Genesis-PyAPI/Makefile
+++ b/biology/py-Genesis-PyAPI/Makefile
@@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}requests>=2.6.0:www/py-requests@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}slumber>=0.7.1:www/py-slumber@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
.include <bsd.port.mk>
diff --git a/biology/py-bx-python/Makefile b/biology/py-bx-python/Makefile
index 5223cb233186..a108c8944169 100644
--- a/biology/py-bx-python/Makefile
+++ b/biology/py-bx-python/Makefile
@@ -18,7 +18,7 @@ PY_DEPENDS= ${PYNUMPY} \
BUILD_DEPENDS= ${PY_DEPENDS}
RUN_DEPENDS= ${PY_DEPENDS}
-USES= compiler python
+USES= compiler python:3.6+
USE_GITHUB= yes
GH_ACCOUNT= bxlab
USE_PYTHON= autoplist cython distutils
diff --git a/biology/py-gtfparse/Makefile b/biology/py-gtfparse/Makefile
index 4a2c588ac31c..faeb2e7dc875 100644
--- a/biology/py-gtfparse/Makefile
+++ b/biology/py-gtfparse/Makefile
@@ -14,7 +14,7 @@ LICENSE= APACHE20
RUN_DEPENDS= ${PYNUMPY} \
${PYTHON_PKGNAMEPREFIX}pandas>=0.15:math/py-pandas@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
NO_ARCH= yes
diff --git a/biology/py-pandas-charm/Makefile b/biology/py-pandas-charm/Makefile
index d01a4d16aa20..2c862c66e12a 100644
--- a/biology/py-pandas-charm/Makefile
+++ b/biology/py-pandas-charm/Makefile
@@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.txt
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
NO_ARCH= yes
diff --git a/biology/py-pyfaidx/Makefile b/biology/py-pyfaidx/Makefile
index a7f9055bc061..9d977925dc48 100644
--- a/biology/py-pyfaidx/Makefile
+++ b/biology/py-pyfaidx/Makefile
@@ -13,7 +13,7 @@ LICENSE= BSD3CLAUSE
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils concurrent autoplist
NO_ARCH= yes
diff --git a/biology/py-pysam/Makefile b/biology/py-pysam/Makefile
index 83d239c7cfc5..9bc3b00b2ebe 100644
--- a/biology/py-pysam/Makefile
+++ b/biology/py-pysam/Makefile
@@ -12,7 +12,7 @@ COMMENT= Python module for reading, manipulating and writing genomic data sets
LICENSE= MIT
LICENSE_FILE= ${WRKSRC}/COPYING
-USES= gmake python
+USES= gmake python:3.6+
USE_PYTHON= autoplist distutils cython cython_run
.include <bsd.port.mk>
diff --git a/biology/py-xenaPython/Makefile b/biology/py-xenaPython/Makefile
index 2d894d23f1b9..1084ac23d73f 100644
--- a/biology/py-xenaPython/Makefile
+++ b/biology/py-xenaPython/Makefile
@@ -11,7 +11,7 @@ COMMENT= API for Xena Hub to access genetic information shared through the hub
LICENSE= APACHE20
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
NO_ARCH= yes
diff --git a/biology/pyfasta/Makefile b/biology/pyfasta/Makefile
index 012ffaa83c15..12286d3d0eac 100644
--- a/biology/pyfasta/Makefile
+++ b/biology/pyfasta/Makefile
@@ -16,7 +16,7 @@ LICENSE= MIT
BUILD_DEPENDS= ${PYNUMPY}
RUN_DEPENDS:= ${BUILD_DEPENDS}
-USES= python
+USES= python:3.6+
USE_PYTHON= distutils autoplist
.include <bsd.port.mk>
diff --git a/biology/python-nexus/Makefile b/biology/python-nexus/Makefile
index ad77f37b86f7..7ac2cdc3a32a 100644
--- a/biology/python-nexus/Makefile
+++ b/biology/python-nexus/Makefile
@@ -13,7 +13,7 @@ COMMENT= Generic nexus file format reader for python
LICENSE= BSD3CLAUSE
#LICENSE_FILE= ${WRKSRC}/LICENSE
-USES= python shebangfix
+USES= python:3.6+ shebangfix
SHEBANG_FILES= nexus/bin/*.py
USE_PYTHON= autoplist distutils