3 files changed, 27 insertions, 27 deletions

diff --git a/math/py-apgl/Makefile b/math/py-apgl/Makefile
index 7ea6f7a64717..085068931242 100644
--- a/math/py-apgl/Makefile
+++ b/math/py-apgl/Makefile
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	apgl
-PORTVERSION=	0.6.1
+PORTVERSION=	0.6.4
 CATEGORIES=	math python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-apgl/distinfo b/math/py-apgl/distinfo
index 886a4f5c9e53..f4e1f2527e91 100644
--- a/math/py-apgl/distinfo
+++ b/math/py-apgl/distinfo
@@ -1,2 +1,2 @@
-SHA256 (apgl-0.6.1.tar.gz) = d249cae93e8d145eacb281be38a5ae113e721a47687abe4f6d8a4840829001a4
-SIZE (apgl-0.6.1.tar.gz) = 170052
+SHA256 (apgl-0.6.4.tar.gz) = 699f8c8021703100b02f771e80178eb73370e06c9450e67ce8940b42f1321050
+SIZE (apgl-0.6.4.tar.gz) = 187008
diff --git a/math/py-apgl/pkg-plist b/math/py-apgl/pkg-plist
index ab77eae35cd3..d77ccf9dcea5 100644
--- a/math/py-apgl/pkg-plist
+++ b/math/py-apgl/pkg-plist
@@ -76,9 +76,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/ErdosRenyiGenerator.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/ErdosRenyiGenerator.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/ErdosRenyiGenerator.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/GeometricRandomGenerator.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/GeometricRandomGenerator.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/GeometricRandomGenerator.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/KroneckerEpidemicGenerator.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/KroneckerEpidemicGenerator.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/KroneckerEpidemicGenerator.pyo
@@ -100,9 +97,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/ErdoRenyiGeneratorTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/ErdoRenyiGeneratorTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/ErdoRenyiGeneratorTest.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/GeometricRandomGeneratorTest.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/GeometricRandomGeneratorTest.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/GeometricRandomGeneratorTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/KroneckerGeneratorTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/KroneckerGeneratorTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/generator/test/KroneckerGeneratorTest.pyo
@@ -148,6 +142,9 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/MarkovGraph.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/MarkovGraph.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/MarkovGraph.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/PySparseGraph.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/PySparseGraph.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/PySparseGraph.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/SparseGraph.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/SparseGraph.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/SparseGraph.pyo
@@ -178,6 +175,9 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/MatrixGraphTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/MatrixGraphTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/MatrixGraphTest.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/PySparseGraphTest.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/PySparseGraphTest.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/PySparseGraphTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/SparseGraphTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/SparseGraphTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/graph/test/SparseGraphTest.pyo
@@ -244,9 +244,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/NeighbourhoodKernel.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/NeighbourhoodKernel.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/NeighbourhoodKernel.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PermutationGraphKernel.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PermutationGraphKernel.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PermutationGraphKernel.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PolyKernel.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PolyKernel.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/PolyKernel.pyo
@@ -271,15 +268,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/NeighbourhoodKernelTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/NeighbourhoodKernelTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/NeighbourhoodKernelTest.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment2.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment2.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphExperiment2.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphKernelTest.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphKernelTest.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PermutationGraphKernelTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PolyKernelTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PolyKernelTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/PolyKernelTest.pyo
@@ -289,6 +277,12 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/__init__.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/__init__.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/kernel/test/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABC.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABCSMC.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABC.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABCSMC.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABC.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/ABCSMC.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/AbstractKernelPredictor.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/AbstractKernelPredictor.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/AbstractKernelPredictor.pyo
@@ -301,9 +295,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/BinomialClassifier.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/BinomialClassifier.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/BinomialClassifier.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/GrowthLearner.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/GrowthLearner.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/GrowthLearner.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/KernelRidgeRegression.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/KernelRidgeRegression.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/KernelRidgeRegression.pyo
@@ -418,9 +409,6 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/BinomialClassifierTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/BinomialClassifierTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/BinomialClassifierTest.pyo
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/GrowthLearnerTest.py
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/GrowthLearnerTest.pyc
-%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/GrowthLearnerTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/KernelRidgeRegressionTest.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/KernelRidgeRegressionTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/KernelRidgeRegressionTest.pyo
@@ -448,6 +436,12 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/__init__.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/__init__.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/__init__.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCTest.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCSMCTest.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCTest.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCSMCTest.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCTest.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/predictors/test/ABCSMCTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/DateUtils.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/DateUtils.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/DateUtils.pyo
@@ -469,6 +463,9 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/ProfileUtils.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/ProfileUtils.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/ProfileUtils.pyo
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/PySparseUtils.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/PySparseUtils.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/PySparseUtils.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/Sampling.py
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/Sampling.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/Sampling.pyo
@@ -488,6 +485,9 @@
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/ParameterTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/ParameterTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PathDefaultsTest.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PySparseUtilsTest.py
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PySparseUtilsTest.pyc
+%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PySparseUtilsTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PathDefaultsTest.pyc
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/PathDefaultsTest.pyo
 %%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/apgl/util/test/SamplingTest.py