4 files changed, 182 insertions, 32 deletions

diff --git a/math/ruby-gsl/Makefile b/math/ruby-gsl/Makefile
index ea0e33b29b66..20a0d42fad6a 100644
--- a/math/ruby-gsl/Makefile
+++ b/math/ruby-gsl/Makefile
@@ -6,9 +6,9 @@
 #
 
 PORTNAME=	gsl
-PORTVERSION=	1.5.0
+PORTVERSION=	1.5.4
 CATEGORIES=	math ruby
-MASTER_SITES=	http://rubyforge.org/frs/download.php/1165/
+MASTER_SITES=	http://rubyforge.org/frs/download.php/2108/
 PKGNAMEPREFIX=	${RUBY_PKGNAMEPREFIX}
 DISTNAME=	rb-${PORTNAME}-${PORTVERSION}
 DIST_SUBDIR=	ruby
@@ -21,7 +21,6 @@ LIB_DEPENDS=	gsl.6:${.CURDIR}/../gsl
 USE_RUBY=	yes
 USE_RUBY_SETUP=	yes
 
-WRKSRC=		${WRKDIR}/rb-${PORTNAME}
 CONFIGURE_ARGS=	-- --with-opt-dir="${LOCALBASE}"
 
 EXAMPLES_EN=	samples/*
diff --git a/math/ruby-gsl/distinfo b/math/ruby-gsl/distinfo
index d5bbc0d5b7e4..f1ed6f0a6a12 100644
--- a/math/ruby-gsl/distinfo
+++ b/math/ruby-gsl/distinfo
@@ -1,2 +1,2 @@
-MD5 (ruby/rb-gsl-1.5.0.tar.gz) = cbc207f3c9fd37c6867e2ce79d95c106
-SIZE (ruby/rb-gsl-1.5.0.tar.gz) = 397106
+MD5 (ruby/rb-gsl-1.5.4.tar.gz) = d9e7befd69947938be78662e0796f9f7
+SIZE (ruby/rb-gsl-1.5.4.tar.gz) = 559452
diff --git a/math/ruby-gsl/files/patch-extconf.rb b/math/ruby-gsl/files/patch-extconf.rb
new file mode 100644
index 000000000000..b298bccedd19
--- /dev/null
+++ b/math/ruby-gsl/files/patch-extconf.rb
@@ -0,0 +1,27 @@
+--- ext/extconf.rb.orig	Mon Dec  6 01:16:04 2004
++++ ext/extconf.rb	Sun Dec 26 03:26:56 2004
+@@ -2,13 +2,13 @@
+ 
+ def gsl_config()
+   print("checking gsl cflags... ")
+-  IO.popen("sh gsl-config --cflags") do |f|
++  IO.popen("gsl-config --cflags") do |f|
+     cflags = f.gets.chomp
+     puts(cflags)
+     $CFLAGS += " -Wall " + cflags
+   end
+    
+-  IO.popen("sh gsl-config --libs") do |f|
++  IO.popen("gsl-config --libs") do |f|
+     libs = f.gets.chomp
+     dir_config("cblas")
+     dir_config("atlas")
+@@ -29,7 +29,7 @@
+ def check_version(configfile)
+   
+   print("checking gsl version... ")
+-  IO.popen("sh gsl-config --version") do |f|
++  IO.popen("gsl-config --version") do |f|
+     ver = f.gets.chomp
+     puts(ver)
+     configfile.printf("#ifndef GSL_VERSION\n#define GSL_VERSION \"#{ver}\"\n#endif\n")
diff --git a/math/ruby-gsl/pkg-plist b/math/ruby-gsl/pkg-plist
index 1ee8b0ef99c1..b31c5bc72b8a 100644
--- a/math/ruby-gsl/pkg-plist
+++ b/math/ruby-gsl/pkg-plist
@@ -1,10 +1,13 @@
 %%RUBY_SITEARCHLIBDIR%%/rb_gsl.so
 %%RUBY_SITELIBDIR%%/gsl.rb
+%%RUBY_SITELIBDIR%%/gsl/oper.rb
+@dirrm %%RUBY_SITELIBDIR%%/gsl
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/blas/dnrm2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/blas/level1.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/blas/level2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/blas/level3.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/cheb/cheb.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/cheb/cheb.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/cheb/cheb2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/combination.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/complex/add.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/complex/coerce.rb
@@ -13,32 +16,58 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/complex/mul.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/complex/set.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/const.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/diff/deriv.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/diff/diff.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/diff/test.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/deriv/demo.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/deriv/deriv.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/deriv/diff.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/dht.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/dirac.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/eigen/eigen.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/eigen/herm.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/forward.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/eigen/qhoscillator.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/eigen/qhoscillator.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/forward.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/radix2.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/radix2.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/real-halfcomplex.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/real-halfcomplex.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/realradix2.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fft/realradix2.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fit/multifit.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fit/multifit.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fit/testwlinear-0.dat
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/fit/wlinear.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/function/function.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/gauss.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/function/log.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/function/sin.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/butterfly.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/cayley.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/cornu.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/eight.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/koch.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/lemniscate.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/polar.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/rgplot/cossin.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/rgplot/roesller.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/roesller.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/gallery/scarabaeus.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/cauchy.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/cauchy.sh
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/exponential.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/gauss.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/gsl-histogram.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/histo2d.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/histo3d.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/histogram.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/integral.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/poisson.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/power.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/rebin.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/histogram/smp.dat
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/ahmed.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/cosmology.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/friedmann.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/friedmann.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/gamma-zeta.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/integration.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qag.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qag2.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qag3.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qagi.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qagi2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qagiu.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/integration/qagp.rb
@@ -58,7 +87,9 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/LU2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/QR.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/QRPT.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/QR_solve.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/SV.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/SV_solve.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/chol.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/linalg/complex.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/math/const.rb
@@ -70,6 +101,9 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/math/test.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/add.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/complex.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/det.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/diagonal.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/hilbert.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/iterator.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/matrix.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/minmax.rb
@@ -79,55 +113,121 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/set.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/view.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/matrix/write.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/min/min.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/min.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/monte/miser.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/monte/monte.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/monte/plain.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/monte/vegas.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multimin/fdfminimizer.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multimin/fminimizer.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multiroot/demo.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multiroot/fdfsolver.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multiroot/fsolver.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multiroot/fsolver2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/multiroot/fsolver3.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/narray/narray.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/narray/narray2.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/nonlinearfit/nonlinearfit.gp
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/nonlinearfit/nonlinearfit.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/nonlinearfit.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/ntuple/create.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/ntuple/histo.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/ntuple/project.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/binarysystem.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/binarysystem.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/duffing.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/frei1.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/frei2.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/legendre.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/odeiv-compare.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/odeiv-compare.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/odeiv.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/odeiv2.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/oscillator.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/sedov.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/tmp_binary.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/whitedwarf.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/odeiv/whitedwarf.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/bernoulli.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/beta.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/binomiral.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/cauchy.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/chisq.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/exponential.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/exppow.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/fdist.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/flat.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/gamma.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/gauss-tail.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/gauss.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/geometric.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/gumbel.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/hypergeometric.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/landau.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/laplace.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/logarithmic.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/logistic.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/lognormal.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/neg-binomiral.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/pareto.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/pascal.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/poisson.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/rayleigh-tail.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/rayleigh.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/tdist.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/pdf/weibull.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/permutation/ex1.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/permutation/permutation.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/bell.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/bessel.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/cheb.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/cheb_II.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/cubic.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/demo.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/hermite.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/poly.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/poly/quadratic.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/diffusion.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/gaussian.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/generator.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/poisson.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/qrng.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/randist.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/randomwalk.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/randomwalk2d.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/rng.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/random/rngextra.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/bisection.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/brent.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/demo.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/newton.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/recombination.gp
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/recombination.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/roots/steffenson.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/bessel.gp
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/bessel.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/gamma.gp
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/gamma.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/ShiChi.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/SiCi.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/airy_Ai.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/airy_Bi.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/bessel_IK.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/bessel_JY.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/beta_inc.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/clausen.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/dawson.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/debye.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/dilog.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/ellint.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/expint.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/fermi.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/gamma_inc_P.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/gegenbauer.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/hyperg.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/leg2.gp
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/leg2.rb
-%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/sf.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/laguerre.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/lambertW.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/legendre_P.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/lngamma.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/psi.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/sphbessel.gp
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/sphbessel.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/synchrotron.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/transport.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sf/zetam1.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/siman.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sort/heapsort.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sort/heapsort_vector_complex.rb
@@ -138,6 +238,10 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/sum.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/add.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/complex.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/connect.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/graph.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/linspace.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/logspace.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/minmax.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/mul.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/narray.rb
@@ -147,6 +251,9 @@
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/vector.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/view.rb
 %%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/vector/write.rb
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/wavelet/ecg.dat
+%%PORTDOCS%%%%RUBY_MODEXAMPLESDIR%%/wavelet/wavelet1.rb
+%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/wavelet
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/vector
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/stats
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/sort
@@ -155,25 +262,26 @@
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/random
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/poly
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/permutation
+%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/pdf
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/odeiv
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/ntuple
-%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/nonlinearfit
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/narray
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/multiroot
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/multimin
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/monte
-%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/min
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/matrix
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/math
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/linalg
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/interp
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/integration
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/histogram
+%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/gallery/rgplot
+%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/gallery
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/function
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/fit
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/fft
 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/eigen
-%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/diff
+%%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/deriv
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 %%PORTDOCS%%@dirrm %%RUBY_MODEXAMPLESDIR%%/blas
@@ -195,13 +303,16 @@
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 %%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/fit.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/graph.html
 %%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/hist.html
 %%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/hist2d.html
+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/hist3d.html
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 %%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/linalg.html
+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/linalg_complex.html
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@@ -209,23 +320,28 @@
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-%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/notimplemented.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/ref.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/rngextra.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/start.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/tensor.html
+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/tut.html
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 %%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/vector.html
+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/html/wavelet.html
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+%%PORTDOCS%%%%RUBY_MODDOCDIR%%/rd/wavelet.rd
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 %%PORTDOCS%%@dirrm %%RUBY_MODDOCDIR%%/html/.xvpics
 %%PORTDOCS%%@dirrm %%RUBY_MODDOCDIR%%/html