15 files changed, 0 insertions, 667 deletions

diff --git a/science/Makefile b/science/Makefile
index bfe903c4db82..0be6f93869e9 100644
--- a/science/Makefile
+++ b/science/Makefile
@@ -13,7 +13,6 @@
     SUBDIR += R-cran-eco
     SUBDIR += abinit
     SUBDIR += afni
-    SUBDIR += at
     SUBDIR += avogadro
     SUBDIR += bddsolve
     SUBDIR += bft
@@ -168,7 +167,6 @@
     SUBDIR += pybrain
     SUBDIR += pycdf
     SUBDIR += pynn
-    SUBDIR += pyvox
     SUBDIR += qcl
     SUBDIR += qtresistors
     SUBDIR += ruby-dcl
diff --git a/science/at/Makefile b/science/at/Makefile
deleted file mode 100644
index 3c406c2997b0..000000000000
--- a/science/at/Makefile
+++ /dev/null
@@ -1,51 +0,0 @@
-# Ports collection makefile for:	at
-# Date created:				Jun 30, 2003
-# Whom:					Heiner Strauss <heiner@bilch.com>
-#
-# $FreeBSD$
-
-PORTNAME=		at
-PORTVERSION=		1.0
-PORTREVISION=	3
-CATEGORIES=		science
-MASTER_SITES=		http://www.hlsresearch.com/oalib/Modes/AcousticsToolbox/
-DISTNAME=		at_Unix
-EXTRACT_SUFX=		.tar.Z
-
-MAINTAINER=		ports@FreeBSD.org
-COMMENT=		The Acoustic ToolBox includes four acoustic models
-
-DEPRECATED=	No more public distfiles
-EXPIRATION_DATE=	2011-09-01
-
-WRKSRC=                 ${WRKDIR}/at
-USE_FORTRAN=		yes
-
-post-patch:
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/Bellhop/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/Kraken/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/KrakenZ/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/Scooter/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/global/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/misc/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" ${WRKSRC}/tslib/Makefile
-	@${REINPLACE_CMD} -e "s|%%FC%%|${FC}|g" -e "s|%%F77%%|${F77}|g" -e "s|%%FFLAGS%%|${FFLAGS}|g" -e "s|%%CFLAGS%%|${CFLAGS}|g" ${WRKSRC}/bb/Makefile
-
-do-build:
-	cd ${WRKSRC}; ${MAKE} install
-
-do-install:
-	${MKDIR} ${PREFIX}/bin
-	${INSTALL_SCRIPT} ${WRKSRC}/scripts/* ${PREFIX}/bin
-	${MKDIR} ${PREFIX}/libexec/at
-	${INSTALL_PROGRAM} `${FIND} ${WRKSRC} -name \*.out -print` \
-		${PREFIX}/libexec/at
-	${MKDIR} ${PREFIX}/share/examples/at
-	${CP} -rp ${WRKSRC}/tests/* ${PREFIX}/share/examples/at
-	${INSTALL_SCRIPT} ${WRKSRC}/at_init ${PREFIX}/share/examples/at
-.if !defined(NOPORTDOCS)
-	${MKDIR} ${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR}
-.endif
-
-.include <bsd.port.mk>
diff --git a/science/at/distinfo b/science/at/distinfo
deleted file mode 100644
index 38f06e97edec..000000000000
--- a/science/at/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (at_Unix.tar.Z) = 7605f8b84659c192b2a8ba467b5e0288ce60f344dc144e8faa597b6c8f1f855f
-SIZE (at_Unix.tar.Z) = 581949
diff --git a/science/at/files/patch-Kraken+covar.f b/science/at/files/patch-Kraken+covar.f
deleted file mode 100644
index 663a96008a07..000000000000
--- a/science/at/files/patch-Kraken+covar.f
+++ /dev/null
@@ -1,24 +0,0 @@
---- Kraken/covar.f~	Thu Feb 26 14:42:17 1998
-+++ Kraken/covar.f	Fri Jan 12 17:40:53 2007
-@@ -252,8 +252,8 @@
-       COMPLEX   NOISE( * )
- 
-       DO IRD = 1, NRD
--         X = RAN( ISEED ) + 0.000001
--         Y = RAN( ISEED )
-+         X = RAN( ISEED(1) ) + 0.000001
-+         Y = RAN( ISEED(1) )
- 
-          NOISE( IRD ) = SIGMA *
-      &      SQRT( -LOG( X ) ) * EXP( CI * 2.0 * PI * Y )
-@@ -287,8 +287,8 @@
-       DO MODE = 1, M
- 
- C        --- compute the random coefficient
--         X = RAN( ISEED ) + 0.000001
--         Y = RAN( ISEED )
-+         X = RAN( ISEED(1) ) + 0.000001
-+         Y = RAN( ISEED(1) )
-          COEF = SQRT( -LOG( X ) ) * EXP( CI * 2.0 * PI * Y )
- 
- C        --- loop over receivers
diff --git a/science/at/files/patch-Kraken+krakenc.f b/science/at/files/patch-Kraken+krakenc.f
deleted file mode 100644
index a8bb198484b5..000000000000
--- a/science/at/files/patch-Kraken+krakenc.f
+++ /dev/null
@@ -1,13 +0,0 @@
---- Kraken/krakenc.f~	Thu May 14 08:46:37 1998
-+++ Kraken/krakenc.f	Fri Jan 12 17:39:37 2007
-@@ -404,8 +404,8 @@
- 
-          IF ( SQRT( OMEGA2 ) / REAL( SQRT( X ) ) .GT. CHIGH ) THEN
- C           --- Mode outside, restart at a random point
--            CTRY = CLOW     + RAN( ISEED ) * ( CHIGH - CLOW )
--     &      + ( 0.0, 0.01 ) * RAN( ISEED ) * CLOW
-+            CTRY = CLOW     + RAN( ISEED(1) ) * ( CHIGH - CLOW )
-+     &      + ( 0.0, 0.01 ) * RAN( ISEED(1) ) * CLOW
-          
-             X = ( 1.0, 0.0 ) * OMEGA2 / CTRY ** 2
- 
diff --git a/science/at/files/patch-aa b/science/at/files/patch-aa
deleted file mode 100644
index 18da63459efb..000000000000
--- a/science/at/files/patch-aa
+++ /dev/null
@@ -1,113 +0,0 @@
---- Bellhop/Makefile.orig       Thu Feb 26 14:42:16 1998
-+++ Bellhop/Makefile    Fri Jan 12 17:30:03 2007
-@@ -1,8 +1,8 @@
--FFLAGS = -O -bytereclen
-+FFLAGS = %%FFLAGS%%
- # note: SGI, use -trapuv, -lfpe in link to trap overflows
-
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F90%%
-
- misc = ../misc
-
---- Kraken/Makefile.orig        Thu Feb 26 14:42:17 1998
-+++ Kraken/Makefile     Fri Jan 12 17:30:26 2007
-@@ -1,7 +1,7 @@
--FFLAGS = -O -bytereclen
-+FFLAGS = %%FFLAGS%%
-
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F77%%
-
- krak = ../Kraken
- misc = ../misc
---- KrakenZ/Makefile.orig       Mon Apr 27 17:36:59 1998
-+++ KrakenZ/Makefile    Fri Jan 12 17:30:41 2007
-@@ -1,8 +1,8 @@
--#FFLAGS= -C -trapuv -check_bounds -g -old_rl
-+FFLAGS = %%FFLAGS%%
- #FFLAGS = +E1   # for HP machines
- #FFLAGS = -O -trapuv -old_rl -mips2 # old_rl forces SGI to use RECL in bytes
-
--#FC = f90
-+FC = %%FC%%
- krak = ../Kraken
- misc = ../misc
-
---- Scooter/Makefile.orig       Thu Feb 26 14:42:22 1998
-+++ Scooter/Makefile    Fri Jan 12 17:31:01 2007
-@@ -1,7 +1,7 @@
--FFLAGS= -O -bytereclen
-+FFLAGS = %%FFLAGS%%
-
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F90%%
-
- misc = ../misc
- tslib = ../tslib
-
---- tslib/Makefile.orig Thu Feb 26 14:42:25 1998
-+++ tslib/Makefile      Fri Jan 12 17:31:39 2007
-@@ -1,7 +1,7 @@
--FFLAGS = -O
-+FFLAGS = %%FFLAGS%%
-
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F77%%
-
- misc = ../misc
-
---- misc/Makefile.orig	Thu Feb 26 14:42:31 1998
-+++ misc/Makefile	Fri Jan 12 17:37:31 2007
-@@ -1,7 +1,7 @@
--FFLAGS = -O -bytereclen
-+FFLAGS = %%FFLAGS%%
- 
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F77%%
- 
- install:	misc
- 
---- global/Makefile.orig	Thu Feb 26 14:42:23 1998
-+++ global/Makefile	Fri Jan 12 17:42:48 2007
-@@ -1,7 +1,7 @@
--FFLAGS = -O -bytereclen
-+FFLAGS = %%FFLAGS%%
- 
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F77%%
- 
- misc = ../misc
- 
---- bb/Makefile.old	Fri Jan 12 17:44:43 2007
-+++ bb/Makefile	Fri Jan 12 17:45:01 2007
-@@ -1,13 +1,13 @@
--FFLAGS = -O
-+FFLAGS = %%FFLAGS%%
- 
--#FC  = f90
--#F77 = f90
-+FC  = %%FC%%
-+F77 = %%F77%%
- 
- krak = ../Kraken
- misc = ../misc
- tslib = ../tslib
- 
--CFLAGS = -O -cckr
-+CFLAGS = %%CFLAGS%%
- 
- install:	others stack.out makets.out fft.out raw.out
- 	@echo "Broadband tools built"
diff --git a/science/at/pkg-descr b/science/at/pkg-descr
deleted file mode 100644
index 4cac6f69ed84..000000000000
--- a/science/at/pkg-descr
+++ /dev/null
@@ -1,19 +0,0 @@
-The Acoustic ToolBox includes four acoustic models:
-
-   BELLHOP: A beam/ray trace code
-
-   KRAKEN:  A normal mode code
-
-   SCOOTER: A finite element FFP code
-
-   SPARC:   A time domain FFP code
-
-A common input structure has been used throughout so that only minor
-modifications are needed to switch from one program to another.
-
-All the models produce shade files which can be processed
-using a common set of plotting routines to plot transmission loss
-vs. range or vs. range and depth.  These plotting routines
-are contained in the GLOBAL directory.
-
-WWW: http://hlsresearch.com/oalib/Modes/AcousticsToolbox/
diff --git a/science/at/pkg-plist b/science/at/pkg-plist
deleted file mode 100644
index 1bfccb9ebb00..000000000000
--- a/science/at/pkg-plist
+++ /dev/null
@@ -1,227 +0,0 @@
-libexec/at/bellhop.out
-libexec/at/angles.out
-libexec/at/beam3d.out
-libexec/at/plotray.out
-libexec/at/tabssp.out
-libexec/at/kraken.out
-libexec/at/krakenc.out
-libexec/at/bounce.out
-libexec/at/field.out
-libexec/at/field3d.out
-libexec/at/plotssp.out
-libexec/at/plotmode.out
-libexec/at/plotgrn.out
-libexec/at/plotirc.out
-libexec/at/plotxy.out
-libexec/at/plottri.out
-libexec/at/plottlr.out
-libexec/at/plottld.out
-libexec/at/plotrth.out
-libexec/at/plotgrp.out
-libexec/at/fieldmo.out
-libexec/at/modasc.out
-libexec/at/modbin.out
-libexec/at/covar.out
-libexec/at/scooter.out
-libexec/at/sparc.out
-libexec/at/fields.out
-libexec/at/plotts.out
-libexec/at/stack.out
-libexec/at/makets.out
-libexec/at/fft.out
-libexec/at/raw.out
-libexec/at/toasc.out
-libexec/at/tobin.out
-libexec/at/tosac.out
-libexec/at/tonrl.out
-libexec/at/pod.out
-libexec/at/plotslic.out
-libexec/at/radius.out
-libexec/at/bart.out
-libexec/at/capon.out
-libexec/at/switchsr.out
-libexec/at/planewav.out
-libexec/at/outback.out
-libexec/at/filter.out
-libexec/at/iso.out
-@dirrm libexec/at
-bin/bart
-bin/bbrun
-bin/bellhop
-bin/bellhopb
-bin/bounce
-bin/capon
-bin/covar
-bin/field
-bin/field3d
-bin/fieldmo
-bin/fields
-bin/filter
-bin/kraken
-bin/krakenb
-bin/krakenc
-bin/krakencb
-bin/makets
-bin/modasc
-bin/modbin
-bin/outback
-bin/plotfield
-bin/plotgrn
-bin/plotgrp
-bin/plotirc
-bin/plotmode
-bin/plotray
-bin/plotrth
-bin/plotslic
-bin/plotssp
-bin/plottld
-bin/plottlr
-bin/plottri
-bin/plotts
-bin/plotxy
-bin/pod
-bin/radius
-bin/scooter
-bin/scooterb
-bin/sparc
-bin/stack
-bin/switchsr
-bin/tabssp
-bin/toasc
-bin/tobin
-bin/tonrl
-bin/tosac
-%%PORTDOCS%%share/doc/at/bart.hlp
-%%PORTDOCS%%share/doc/at/bellhop.hlp
-%%PORTDOCS%%share/doc/at/bounce.hlp
-%%PORTDOCS%%share/doc/at/field.hlp
-%%PORTDOCS%%share/doc/at/field3d.hlp
-%%PORTDOCS%%share/doc/at/fields.hlp
-%%PORTDOCS%%share/doc/at/kraken.hlp
-%%PORTDOCS%%share/doc/at/notes.hlp
-%%PORTDOCS%%share/doc/at/plotfield.hlp
-%%PORTDOCS%%share/doc/at/plotgrn.hlp
-%%PORTDOCS%%share/doc/at/plotmode.hlp
-%%PORTDOCS%%share/doc/at/plotray.hlp
-%%PORTDOCS%%share/doc/at/plotrth.hlp
-%%PORTDOCS%%share/doc/at/plotslice.hlp
-%%PORTDOCS%%share/doc/at/plotssp.hlp
-%%PORTDOCS%%share/doc/at/plottld.hlp
-%%PORTDOCS%%share/doc/at/plottlr.hlp
-%%PORTDOCS%%share/doc/at/plottri.hlp
-%%PORTDOCS%%share/doc/at/plotts.hlp
-%%PORTDOCS%%share/doc/at/scooter.hlp
-%%PORTDOCS%%share/doc/at/sparc.hlp
-%%PORTDOCS%%@dirrm share/doc/at
-share/examples/at/sgiprt/twerskys.prt
-share/examples/at/sgiprt/attenr.prt
-share/examples/at/sgiprt/attens.prt
-share/examples/at/sgiprt/doublec.prt
-share/examples/at/sgiprt/doubler.prt
-share/examples/at/sgiprt/doubles.prt
-share/examples/at/sgiprt/elsedc.prt
-share/examples/at/sgiprt/elsedr.prt
-share/examples/at/sgiprt/elseds.prt
-share/examples/at/sgiprt/flusedc.prt
-share/examples/at/sgiprt/flusedr.prt
-share/examples/at/sgiprt/fluseds.prt
-share/examples/at/sgiprt/icec.prt
-share/examples/at/sgiprt/icer.prt
-share/examples/at/sgiprt/ices.prt
-share/examples/at/sgiprt/kuperbc.prt
-share/examples/at/sgiprt/kuperbr.prt
-share/examples/at/sgiprt/kuperbs.prt
-share/examples/at/sgiprt/kupermc.prt
-share/examples/at/sgiprt/kupermr.prt
-share/examples/at/sgiprt/kuperms.prt
-share/examples/at/sgiprt/kupertc.prt
-share/examples/at/sgiprt/kupertr.prt
-share/examples/at/sgiprt/kuperts.prt
-share/examples/at/sgiprt/normalc.prt
-share/examples/at/sgiprt/normalr.prt
-share/examples/at/sgiprt/normals.prt
-share/examples/at/sgiprt/pekerisc.prt
-share/examples/at/sgiprt/pekerisr.prt
-share/examples/at/sgiprt/pekeriss.prt
-share/examples/at/sgiprt/scholtec.prt
-share/examples/at/sgiprt/scholter.prt
-share/examples/at/sgiprt/scholtes.prt
-share/examples/at/sgiprt/twerskyc.prt
-share/examples/at/sgiprt/twerskyr.prt
-share/examples/at/sgiprt/attenc.prt
-share/examples/at/wedge/wedge150.ps
-share/examples/at/wedge/field.flp
-share/examples/at/wedge/interp.f
-share/examples/at/wedge/krakenall
-share/examples/at/wedge/plotshd.m
-share/examples/at/wedge/plotslice.par
-share/examples/at/wedge/plottlr.plp
-share/examples/at/wedge/rd150.plp
-share/examples/at/wedge/rd30.plp
-share/examples/at/wedge/sedslope
-share/examples/at/wedge/sweep
-share/examples/at/wedge/tl.plp
-share/examples/at/wedge/wedge.env
-share/examples/at/wedge/field
-share/examples/at/twersky.env
-share/examples/at/scholte.plp
-share/examples/at/scholte.env
-share/examples/at/runplots
-share/examples/at/refl.env
-share/examples/at/plotts.plp
-share/examples/at/plottri.plp
-share/examples/at/plottri.par
-share/examples/at/plottlr.plp
-share/examples/at/plottlr.par
-share/examples/at/plottld.plp
-share/examples/at/plottld.par
-share/examples/at/plotssp.plp
-share/examples/at/plotssp.par
-share/examples/at/plotslic.par
-share/examples/at/plotrth.plp
-share/examples/at/plotrth.par
-share/examples/at/plotray.plp
-share/examples/at/plotray.par
-share/examples/at/plotmode.plp
-share/examples/at/plotirc.plp
-share/examples/at/plotgrn.plp
-share/examples/at/plotgrn.par
-share/examples/at/pekeris.plp
-share/examples/at/pekeris.env
-share/examples/at/normal.plp
-share/examples/at/normal.env
-share/examples/at/munkB.env
-share/examples/at/med.flp
-share/examples/at/kupert.plp
-share/examples/at/kupert.env
-share/examples/at/kuperm.plp
-share/examples/at/kuperm.env
-share/examples/at/kuperb.plp
-share/examples/at/kuperb.env
-share/examples/at/kcs
-share/examples/at/iso.env
-share/examples/at/ice.plp
-share/examples/at/ice.env
-share/examples/at/framiv.plp
-share/examples/at/framiv.env
-share/examples/at/foo.env
-share/examples/at/flused.plp
-share/examples/at/flused.env
-share/examples/at/fields.flp
-share/examples/at/fieldbat.flp
-share/examples/at/fieldarc.flp
-share/examples/at/bat
-share/examples/at/field.flp
-share/examples/at/elsed.plp
-share/examples/at/elsed.env
-share/examples/at/double.plp
-share/examples/at/double.env
-share/examples/at/calibB.env
-share/examples/at/atten.plp
-share/examples/at/atten.env
-share/examples/at/Makefile
-share/examples/at/twersky.plp
-share/examples/at/at_init
-@dirrm share/examples/at/sgiprt
-@dirrm share/examples/at/wedge
-@dirrm share/examples/at
diff --git a/science/pyvox/Makefile b/science/pyvox/Makefile
deleted file mode 100644
index 8e940556cb39..000000000000
--- a/science/pyvox/Makefile
+++ /dev/null
@@ -1,69 +0,0 @@
-# ex:ts=8
-# Ports collection Makefile for:	bblimage
-# Date created:			Jul 22, 2002
-# Whom:				ijliao
-#
-# $FreeBSD$
-#
-
-PORTNAME=	pyvox
-PORTVERSION=	0.72
-CATEGORIES=	science
-MASTER_SITES=	http://www.med.upenn.edu/bbl/downloads/pyvox/
-EXTRACT_SUFX=	.src.tgz
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	A set of software tools for medical image processing
-
-DEPRECATED=	No more public distfiles
-EXPIRATION_DATE=	2011-09-01
-
-LICENSE=	MIT
-
-LIB_DEPENDS=	lapack.4:${PORTSDIR}/math/lapack
-
-GNU_CONFIGURE=		yes
-LAPACK?=		-llapack -lblas
-CONFIGURE_ARGS =	--with-lapack="${LAPACK}" --with-python="${PYTHON_CMD}"
-CONFIGURE_ENV=		ac_cv_header_tgmath_h=no
-USE_GMAKE=		yes
-USE_LDCONFIG=		yes
-USE_PYTHON=		2.5+
-
-.if defined(WITHOUT_X11)
-CONFIGURE_ARGS+=--without-x
-PLIST_SUB+=	X11="@comment "
-.else
-CONFIGURE_ARGS+=--with-x
-BUILD_DEPENDS+=	${PYTHON_SITELIBDIR}/Pmw/__init__.py:${PORTSDIR}/x11-toolkits/py-Pmw
-RUN_DEPENDS+=	${PYTHON_SITELIBDIR}/Pmw/__init__.py:${PORTSDIR}/x11-toolkits/py-Pmw
-USE_MOTIF=	yes
-USE_TK =	82+
-CFLAGS+=	-DUSE_COMPOSITELESS_PHOTO_PUT_BLOCK -I${LOCALBASE}/include \
-		-I${TCL_INCLUDEDIR} -I${TK_INCLUDEDIR}
-PLIST_SUB+=	X11=""
-.endif
-
-MAN1=	affreg.1 anonavw.1 bredit.1 decomment.1 dumpavw.1 editavw.1 makeavw.1 pyvox.1 \
-	reged.1 regedit.1 qdv.1
-MAN5=	cdata.5 param.5
-
-.include <bsd.port.pre.mk>
-
-post-patch:
-.if defined(WITHOUT_X11)
-	@${REINPLACE_CMD} -e '\|pmw=yes|s|yes|no|' -e '\|tkinter=yes|s|yes|no|' \
-		${WRKSRC}/configure
-	@${REINPLACE_CMD} -e '\|#include "tk.h"|d' ${WRKSRC}/include/pyvox.h
-.else
-	@${REINPLACE_CMD} -e 's|-ltk|&${USE_TK}|' \
-		${WRKSRC}/Makefile.in
-.endif
-
-.if defined(MAINTAINER_MODE)
-check regress regression-test test: build
-	 @(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} ${GMAKE} ${MAKE_FLAGS} \
-	 ${MAKEFILE} ${_MAKE_JOBS} ${MAKE_ARGS} regress)
-.endif
-
-.include <bsd.port.post.mk>
diff --git a/science/pyvox/distinfo b/science/pyvox/distinfo
deleted file mode 100644
index 62547d6b3ece..000000000000
--- a/science/pyvox/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (pyvox-0.72.src.tgz) = d7a733faa323d8cdca51e8244e9c50c91bccbb77543e546125f7b251a3c75a61
-SIZE (pyvox-0.72.src.tgz) = 1501027
diff --git a/science/pyvox/files/patch-src__parray.c b/science/pyvox/files/patch-src__parray.c
deleted file mode 100644
index a84acca50fdd..000000000000
--- a/science/pyvox/files/patch-src__parray.c
+++ /dev/null
@@ -1,76 +0,0 @@
---- ./src/parray.c.orig	2006-02-24 12:18:51.000000000 -0500
-+++ ./src/parray.c	2011-07-01 02:32:12.000000000 -0400
-@@ -991,7 +991,7 @@
-     if (DEBUG_ALLOC) {
- 	fprintf(stderr, "parray create:  %p\n", self);
- 	if (0) 
--	    fprintf(stderr, "...reference count = %d\n",
-+	    fprintf(stderr, "...reference count = %zd\n",
- 		    ((PyObject *)self)->ob_refcnt); 
-     }
- 
-@@ -1171,7 +1171,7 @@
-     if (DEBUG_ALLOC) {
- 	fprintf(stderr, "parray alloc:   %p\n", self);
- 	if (0) 
--	    fprintf(stderr, "...reference count = %d\n",
-+	    fprintf(stderr, "...reference count = %zd\n",
- 		    ((PyObject *)self)->ob_refcnt); 
-     }
- 
-@@ -2074,7 +2074,7 @@
- 
- static PyMappingMethods
- parray_as_mapping = {
--    (inquiry)       parray_length,    /* mp_length:        len(x)   */
-+    (lenfunc)       parray_length,    /* mp_length:        len(x)   */
-     (binaryfunc)    parray_getitem,   /* mp_subscript:     x[y]     */
-     (objobjargproc) parray_setitem,   /* mp_ass_subscript: x[y] = v */
- };
-@@ -2204,13 +2204,13 @@
- 
- static PySequenceMethods 
- parray_as_sequence = {
--    (inquiry)          0,                  /* sq_length:     len(x)     */
-+    (lenfunc)          0,                  /* sq_length:     len(x)     */
-     (binaryfunc)       0,                  /* sq_concat:     x + y      */
--    (intargfunc)       0,                  /* sq_repeat:     n * x      */
--    (intargfunc)       0,                  /* sq_item:       x[i]       */
--    (intintargfunc)    parray_getslice,    /* sq_slice:      x[i:j]     */
--    (intobjargproc)    0,                  /* sq_ass_item:   x[i] = v   */
--    (intintobjargproc) parray_setslice,    /* sq_ass_slice:  x[i:j] = v */
-+    (ssizeargfunc)       0,                  /* sq_repeat:     n * x      */
-+    (ssizeargfunc)       0,                  /* sq_item:       x[i]       */
-+    (ssizessizeargfunc)    parray_getslice,    /* sq_slice:      x[i:j]     */
-+    (ssizeobjargproc)    0,                  /* sq_ass_item:   x[i] = v   */
-+    (ssizessizeobjargproc) parray_setslice,    /* sq_ass_slice:  x[i:j] = v */
- };
- 
- 
-@@ -7386,7 +7386,7 @@
- 
-     /* DEBUG: Print ref counts of arguments */
-     if (0) {
--      printf("Refcnts 1: %d, %d\n", self->ob_refcnt, filename->ob_refcnt);
-+      printf("Refcnts 1: %zd, %zd\n", self->ob_refcnt, filename->ob_refcnt);
-     }
- 
-     /* Paste self onto front of argument tuple.  FIXME: This is really
-@@ -7400,7 +7400,7 @@
- 
-     /* DEBUG: Print ref counts of arguments */
-     if (0) {
--      printf("Refcnts 2: %d, %d, %d\n", self->ob_refcnt, filename->ob_refcnt,
-+      printf("Refcnts 2: %zd, %zd, %zd\n", self->ob_refcnt, filename->ob_refcnt,
- 	     newargs->ob_refcnt);
-     }
- 
-@@ -7418,7 +7418,7 @@
- 
-     /* DEBUG: Print ref counts of arguments */
-     if (0) {
--      printf("Refcnts 3: %d, %d, %d\n", self->ob_refcnt, filename->ob_refcnt,
-+      printf("Refcnts 3: %zd, %zd, %zd\n", self->ob_refcnt, filename->ob_refcnt,
- 	     newargs->ob_refcnt);
-     }
- 
diff --git a/science/pyvox/files/patch-src__pyvox.c b/science/pyvox/files/patch-src__pyvox.c
deleted file mode 100644
index 07f056943e7d..000000000000
--- a/science/pyvox/files/patch-src__pyvox.c
+++ /dev/null
@@ -1,20 +0,0 @@
---- ./src/pyvox.c.orig	2006-02-24 16:33:41.000000000 -0500
-+++ ./src/pyvox.c	2011-07-01 02:29:06.000000000 -0400
-@@ -1850,7 +1850,7 @@
-     if (0) {
- 	fprintf(stderr, "Created new kernel object at %p\n", self);
- 	if (0) 
--	    fprintf(stderr, "...reference count = %d\n",
-+	    fprintf(stderr, "...reference count = %zd\n",
- 		    ((PyObject *)self)->ob_refcnt); 
-     }
- 
-@@ -2273,7 +2273,7 @@
- 
- static PyMappingMethods
- kernel_as_mapping = {
--    (inquiry)       kernel_length,    /* mp_length:        len(x)   */
-+    (lenfunc)       kernel_length,    /* mp_length:        len(x)   */
-     (binaryfunc)    kernel_getitem,   /* mp_subscript:     x[y]     */
-     (objobjargproc) kernel_setitem,   /* mp_ass_subscript: x[y] = v */
- };
diff --git a/science/pyvox/files/patch-src__tkphoto.c b/science/pyvox/files/patch-src__tkphoto.c
deleted file mode 100644
index 9be4a5503b5f..000000000000
--- a/science/pyvox/files/patch-src__tkphoto.c
+++ /dev/null
@@ -1,11 +0,0 @@
---- ./src/tkphoto.c.orig	2005-12-29 13:33:15.000000000 -0500
-+++ ./src/tkphoto.c	2011-07-01 02:28:06.000000000 -0400
-@@ -632,7 +632,7 @@
-     if (0) {
- 	fprintf(stderr, "Created new tkphoto object at %p\n", self);
- 	if (0) 
--	    fprintf(stderr, "...reference count = %d\n",
-+	    fprintf(stderr, "...reference count = %zd\n",
- 		    ((PyObject *)pytk)->ob_refcnt); 
-     }
- 
diff --git a/science/pyvox/pkg-descr b/science/pyvox/pkg-descr
deleted file mode 100644
index 02eb66e38c1e..000000000000
--- a/science/pyvox/pkg-descr
+++ /dev/null
@@ -1,12 +0,0 @@
-Pyvox (formerly known as BBLimage) is a set of software tools for medical
-image processing, particularly skull stripping and segmentation of MR brain
-images (tools to support other applications may be added later). These tools
-are intended to support researchers who need to prototype new image analysis
-algorithms or to develop automated image analysis tools for specific image
-analysis applications. The sequence of processing operations is specified
-through the scripting language Python, which can be used interactively or in
-command files.
-
-Pyvox scripts and date files are portable, easily extensible, and suitable
-both for rapid prototyping of new algorithms and analysis protocols, and also
-for efficient, automated processing of the finished analysis protocols.
diff --git a/science/pyvox/pkg-plist b/science/pyvox/pkg-plist
deleted file mode 100644
index 2d3ecb6c87dd..000000000000
--- a/science/pyvox/pkg-plist
+++ /dev/null
@@ -1,26 +0,0 @@
-bin/affreg
-bin/anonavw
-bin/bredit
-bin/decomment
-bin/dumpavw
-bin/editavw
-bin/makeavw
-%%X11%%bin/qdv
-bin/regedit
-include/errm.h
-include/exim.h
-include/memm.h
-include/voxel.h
-lib/libpyvox.so
-lib/libvoxkit.so
-%%PYTHON_SITELIBDIR%%/exim.so
-%%PYTHON_SITELIBDIR%%/optim.py
-%%PYTHON_SITELIBDIR%%/optim.pyc
-%%PYTHON_SITELIBDIR%%/pyvox.py
-%%PYTHON_SITELIBDIR%%/pyvox.pyc
-%%PYTHON_SITELIBDIR%%/pyvoxC.so
-%%PYTHON_SITELIBDIR%%/reged.py
-%%PYTHON_SITELIBDIR%%/reged.pyc
-%%PYTHON_SITELIBDIR%%/regis.py
-%%PYTHON_SITELIBDIR%%/regis.pyc
-%%X11%%%%PYTHON_SITELIBDIR%%/tkphoto.so