diff options
| author | Gabor Pali <pgj@FreeBSD.org> | 2010-07-30 09:14:14 +0000 |
|---|---|---|
| committer | Gabor Pali <pgj@FreeBSD.org> | 2010-07-30 09:14:14 +0000 |
| commit | 342016568ae900e83fad3ebbc6297aa5daea0ff2 (patch) | |
| tree | 21ce1c3ce16d943ad50fb72bc63c85df3720d931 /science | |
| parent | e66dd8ac0c3f9d0f09f31e4f6ee7ef122037c5b2 (diff) | |
| download | ports-342016568ae900e83fad3ebbc6297aa5daea0ff2.tar.gz ports-342016568ae900e83fad3ebbc6297aa5daea0ff2.zip | |
Notes
Diffstat (limited to 'science')
| -rw-r--r-- | science/hs-bio/Makefile | 3 | ||||
| -rw-r--r-- | science/hs-bio/distinfo | 6 | ||||
| -rw-r--r-- | science/hs-bio/files/patch-bio.cabal | 11 | ||||
| -rw-r--r-- | science/hs-bio/pkg-plist | 4 |
4 files changed, 19 insertions, 5 deletions
diff --git a/science/hs-bio/Makefile b/science/hs-bio/Makefile index ecdd536ff81d..3990bd79a6ab 100644 --- a/science/hs-bio/Makefile +++ b/science/hs-bio/Makefile @@ -6,8 +6,7 @@ # PORTNAME= bio -PORTVERSION= 0.4 -PORTREVISION= 1 +PORTVERSION= 0.4.6 CATEGORIES= science haskell MAINTAINER= haskell@FreeBSD.org diff --git a/science/hs-bio/distinfo b/science/hs-bio/distinfo index 3239c462b91d..b5bc11bd839b 100644 --- a/science/hs-bio/distinfo +++ b/science/hs-bio/distinfo @@ -1,3 +1,3 @@ -MD5 (bio-0.4.tar.gz) = 339b6d5a14a04a4049c99e08892d8d25 -SHA256 (bio-0.4.tar.gz) = fb53411637cab2150880e6ea0319984e5e45ee90275fc2dd629cb86fc4f048d9 -SIZE (bio-0.4.tar.gz) = 79415 +MD5 (bio-0.4.6.tar.gz) = 1235cbc3a35ff34c91580e37b8dce878 +SHA256 (bio-0.4.6.tar.gz) = 8cec219365412bb2932218fc20a623449ca5ec4a44257bb93d6072547f21122c +SIZE (bio-0.4.6.tar.gz) = 86798 diff --git a/science/hs-bio/files/patch-bio.cabal b/science/hs-bio/files/patch-bio.cabal new file mode 100644 index 000000000000..daca1e34cb76 --- /dev/null +++ b/science/hs-bio/files/patch-bio.cabal @@ -0,0 +1,11 @@ +--- ./bio.cabal.orig 2010-07-20 16:19:58.000000000 +0200 ++++ ./bio.cabal 2010-07-29 13:06:19.000000000 +0200 +@@ -26,7 +26,7 @@ + + Tested-With: GHC==6.12.1 + Build-Type: Simple +-Build-Depends: base>=4 && <5, QuickCheck>=2, binary >=0.4 && <0.5, tagsoup>=0.4 && <0.8, bytestring >= 0.9.1, ++Build-Depends: base>=4 && <5, QuickCheck>=2, binary, tagsoup>=0.4, bytestring >= 0.9.1, + containers, array, parallel, parsec, random, old-time, mtl + + Data-Files: README diff --git a/science/hs-bio/pkg-plist b/science/hs-bio/pkg-plist index 3e810e6286e0..e1d283862995 100644 --- a/science/hs-bio/pkg-plist +++ b/science/hs-bio/pkg-plist @@ -2,6 +2,7 @@ %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/AAlign.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/ACE.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/AlignData.hi +%%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/BED.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/Blast.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/BlastData.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/BlastFlat.hi @@ -10,6 +11,7 @@ %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/Matrices.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/Multiple.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/QAlign.hi +%%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/PSL.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/SAlign.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Alignment/Soap.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Clustering.hi @@ -27,6 +29,7 @@ %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Location/SeqLocation.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Location/Strand.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence.hi +%%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/AminoProperties.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/Entropy.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/FastQ.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/Fasta.hi @@ -36,6 +39,7 @@ %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/KEGG.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/Phd.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/SFF.hi +%%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/SFF_filters.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/SFF_name.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/SeqData.hi %%LIBDIR_REL%%/ghc-%%GHC_VERSION%%/Bio/Sequence/TwoBit.hi |