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-rw-r--r--biology/pymol/Makefile8
-rw-r--r--biology/pymol/distinfo4
-rw-r--r--biology/pymol/pkg-plist37
3 files changed, 41 insertions, 8 deletions
diff --git a/biology/pymol/Makefile b/biology/pymol/Makefile
index 665e0d1dde2b..dd1f70fa088a 100644
--- a/biology/pymol/Makefile
+++ b/biology/pymol/Makefile
@@ -18,12 +18,12 @@ RUN_DEPENDS= ${PYNUMERIC} \
LIB_DEPENDS= png.6:${PORTSDIR}/graphics/png \
freetype.9:${PORTSDIR}/print/freetype2
-VERSION= 1.3r1
-SVNREVISION= 3913
+VERSION= 1.4.1
+SVNREVISION= 3946
USE_BZIP2= yes
WRKSRC= ${WRKDIR}/pymol-${PORTVERSION}
-USE_GL= glut
+USE_GL= glut glew
USE_GMAKE= yes
USE_PYTHON= yes
PLIST_SUB= PYTHON_VER=${PYTHON_VER}
@@ -44,7 +44,7 @@ do-fetch-svn:
#svn ls https://pymol.svn.sourceforge.net/svnroot/pymol/tags
#http://pymol.svn.sourceforge.net/viewvc/pymol/trunk/
${RM} -rf pymol-${VERSION}.${SVNREVISION}
- svn -r ${SVNREVISION} export https://pymol.svn.sourceforge.net/svnroot/pymol/trunk/pymol pymol-${VERSION}.${SVNREVISION}
+ svn -r ${SVNREVISION} export http://pymol.svn.sourceforge.net/svnroot/pymol/trunk/pymol pymol-${VERSION}.${SVNREVISION}
tar cvfj pymol-${VERSION}.${SVNREVISION}.tar.bz2 pymol-${VERSION}.${SVNREVISION}
scp pymol-${VERSION}.${SVNREVISION}.tar.bz2 freefall.freebsd.org:public_distfiles/pymol/
diff --git a/biology/pymol/distinfo b/biology/pymol/distinfo
index 85c487d610d5..8472777d7006 100644
--- a/biology/pymol/distinfo
+++ b/biology/pymol/distinfo
@@ -1,2 +1,2 @@
-SHA256 (pymol-1.3r1.3913.tar.bz2) = 32b1995d6c87d35b71fe5025e81e9b68b0d96d60825d8aac33685e70d73e8d87
-SIZE (pymol-1.3r1.3913.tar.bz2) = 6967557
+SHA256 (pymol-1.4.1.3946.tar.bz2) = 0b505ed6275fa1aeec6036830d28c8ee5feedfd67bcac7def873f0481f2cb558
+SIZE (pymol-1.4.1.3946.tar.bz2) = 9038319
diff --git a/biology/pymol/pkg-plist b/biology/pymol/pkg-plist
index 8d8509e8bf8c..4c01bb24eb22 100644
--- a/biology/pymol/pkg-plist
+++ b/biology/pymol/pkg-plist
@@ -68,6 +68,8 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/chempy/models.pyc
%%PYTHON_SITELIBDIR%%/chempy/mol.py
%%PYTHON_SITELIBDIR%%/chempy/mol.pyc
+%%PYTHON_SITELIBDIR%%/chempy/mol2.py
+%%PYTHON_SITELIBDIR%%/chempy/mol2.pyc
%%PYTHON_SITELIBDIR%%/chempy/neighbor.py
%%PYTHON_SITELIBDIR%%/chempy/neighbor.pyc
%%PYTHON_SITELIBDIR%%/chempy/pdb.py
@@ -122,8 +124,20 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pmg_tk/skins/__init__.pyc
%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/__init__.py
%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/__init__.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/SimpleColorChooser.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/SimpleColorChooser.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ColorMap.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ColorMap.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ColorRampModel.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ColorRampModel.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ModalWindow.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/ModalWindow.pyc
%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/builder.py
%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/builder.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/hist.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/volume.py
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/hist.pyc
+%%PYTHON_SITELIBDIR%%/pmg_tk/skins/normal/volume.pyc
%%PYTHON_SITELIBDIR%%/pmg_tk/startup/__init__.py
%%PYTHON_SITELIBDIR%%/pmg_tk/startup/__init__.pyc
%%PYTHON_SITELIBDIR%%/pmg_tk/startup/apbs_tools.py
@@ -132,7 +146,7 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pmg_tk/startup/remote_pdb_load.pyc
%%PYTHON_SITELIBDIR%%/pmg_wx/__init__.py
%%PYTHON_SITELIBDIR%%/pmg_wx/__init__.pyc
-%%PYTHON_SITELIBDIR%%/pymol-1.2.0-py%%PYTHON_VER%%.egg-info
+%%PYTHON_SITELIBDIR%%/pymol-1.4.0-py%%PYTHON_VER%%.egg-info
%%PYTHON_SITELIBDIR%%/pymol/__init__.py
%%PYTHON_SITELIBDIR%%/pymol/__init__.pyc
%%PYTHON_SITELIBDIR%%/pymol/_cmd.so
@@ -146,6 +160,8 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pymol/checking.pyc
%%PYTHON_SITELIBDIR%%/pymol/cmd.py
%%PYTHON_SITELIBDIR%%/pymol/cmd.pyc
+%%PYTHON_SITELIBDIR%%/pymol/colorramping.py
+%%PYTHON_SITELIBDIR%%/pymol/colorramping.pyc
%%PYTHON_SITELIBDIR%%/pymol/commanding.py
%%PYTHON_SITELIBDIR%%/pymol/commanding.pyc
%%PYTHON_SITELIBDIR%%/pymol/completing.py
@@ -178,6 +194,8 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pymol/gui.pyc
%%PYTHON_SITELIBDIR%%/pymol/helping.py
%%PYTHON_SITELIBDIR%%/pymol/helping.pyc
+%%PYTHON_SITELIBDIR%%/pymol/headering.py
+%%PYTHON_SITELIBDIR%%/pymol/headering.pyc
%%PYTHON_SITELIBDIR%%/pymol/importing.py
%%PYTHON_SITELIBDIR%%/pymol/importing.pyc
%%PYTHON_SITELIBDIR%%/pymol/internal.py
@@ -389,7 +407,11 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/cmyk.png
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/matrices/BLOSUM62
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/splash.old.png
-%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/splash.png
+%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/hsv.ppm
+%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/shaders/default.fs
+%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/shaders/default.vs
+%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/shaders/volume.fs
+%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/shaders/volume.vs
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/tut/1hpv.pdb
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/chempy/generate_amber.py
%%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/chempy/generate_mmff.py
@@ -749,6 +771,16 @@ bin/pymol
%%PYTHON_SITELIBDIR%%/pymol/xray.pyc
%%PYTHON_SITELIBDIR%%/pymol/xwin.py
%%PYTHON_SITELIBDIR%%/pymol/xwin.pyc
+%%PYTHON_SITELIBDIR%%/web/__init__.py
+%%PYTHON_SITELIBDIR%%/web/__init__.pyc
+%%PYTHON_SITELIBDIR%%/web/pymolhttpd.py
+%%PYTHON_SITELIBDIR%%/web/pymolhttpd.pyc
+%%PYTHON_SITELIBDIR%%/web/examples/__init__.py
+%%PYTHON_SITELIBDIR%%/web/examples/__init__.pyc
+%%PYTHON_SITELIBDIR%%/web/examples/justhttpd.py
+%%PYTHON_SITELIBDIR%%/web/examples/justhttpd.pyc
+@dirrm %%PYTHON_SITELIBDIR%%/web/examples
+@dirrm %%PYTHON_SITELIBDIR%%/web
@dirrm %%PYTHON_SITELIBDIR%%/pymol/wizard
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/test/ref
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/test/inp
@@ -764,6 +796,7 @@ bin/pymol
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples/chempy
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/examples
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/tut
+@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/shaders
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol/matrices
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pymol
@dirrm %%PYTHON_SITELIBDIR%%/pymol/pymol_path/data/pmg_tk/bitmaps/builder
generated by cgit v1.2.3 (git 2.25.1) at 2024-11-19 18:47:55 +0000