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-rw-r--r--astro/gnuastro/Makefile2
-rw-r--r--astro/siril/Makefile2
-rw-r--r--audio/p5-Audio/Makefile2
-rw-r--r--audio/snd/Makefile2
-rw-r--r--benchmarks/flowgrind/Makefile2
-rw-r--r--biology/bcftools/Makefile1
-rw-r--r--biology/gemma/Makefile4
-rw-r--r--biology/viennarna/Makefile2
-rw-r--r--comms/gnuradio/Makefile2
-rw-r--r--editors/calligra/Makefile2
-rw-r--r--graphics/enblend/Makefile2
-rw-r--r--graphics/inkscape/Makefile2
-rw-r--r--graphics/krita/Makefile2
-rw-r--r--graphics/luminance-qt5/Makefile2
-rw-r--r--graphics/mandelbulber/Makefile2
-rw-r--r--graphics/nip2/Makefile2
-rw-r--r--graphics/pfstools/Makefile2
-rw-r--r--graphics/qgis-ltr/Makefile2
-rw-r--r--graphics/qgis/Makefile1
-rw-r--r--graphics/xaos/Makefile2
-rw-r--r--lang/algol68g/Makefile2
-rw-r--r--mail/bogofilter-kc/Makefile2
-rw-r--r--mail/bogofilter-lmdb/Makefile2
-rw-r--r--mail/bogofilter-sqlite/Makefile2
-rw-r--r--mail/bogofilter-tc/Makefile2
-rw-r--r--mail/bogofilter/Makefile2
-rw-r--r--math/asymptote/Makefile2
-rw-r--r--math/deal.ii/Makefile2
-rw-r--r--math/dieharder/Makefile2
-rw-r--r--math/fflas-ffpack/Makefile2
-rw-r--r--math/giacxcas/Makefile1
-rw-r--r--math/gsl/Makefile3
-rw-r--r--math/gsl/distinfo6
-rw-r--r--math/gsl/pkg-plist22
-rw-r--r--math/labplot/Makefile1
-rw-r--r--math/mandelbulber2/Makefile2
-rw-r--r--math/mathgl/Makefile1
-rw-r--r--math/mcsim/Makefile1
-rw-r--r--math/ocamlgsl/Makefile2
-rw-r--r--math/octave-forge-gsl/Makefile2
-rw-r--r--math/orpie/Makefile2
-rw-r--r--math/p5-Algorithm-KMeans/Makefile1
-rw-r--r--math/p5-Math-GSL/Makefile3
-rw-r--r--math/pspp/Makefile2
-rw-r--r--math/py-cvxopt/Makefile2
-rw-r--r--math/py-pygsl/Makefile2
-rw-r--r--math/py-pygslodeiv2/Makefile2
-rw-r--r--math/rubygem-rb-gsl/Makefile2
-rw-r--r--misc/visp/Makefile2
-rw-r--r--science/afni/Makefile2
-rw-r--r--science/antioch/Makefile2
-rw-r--r--science/coot/Makefile2
-rw-r--r--science/erkale/Makefile2
-rw-r--r--science/fisicalab/Makefile2
-rw-r--r--science/getdp/Makefile2
-rw-r--r--science/gnudatalanguage/Makefile2
-rw-r--r--science/jdftx/Makefile1
-rw-r--r--science/kst2/Makefile2
-rw-r--r--science/meep/Makefile2
-rw-r--r--science/nest/Makefile2
-rw-r--r--science/octopus/Makefile2
-rw-r--r--science/py-mlpy/Makefile2
-rw-r--r--science/scidavis/Makefile2
-rw-r--r--science/step/Makefile1
64 files changed, 89 insertions, 58 deletions
diff --git a/astro/gnuastro/Makefile b/astro/gnuastro/Makefile
index 307e3aebdd04..4cc1fba6c614 100644
--- a/astro/gnuastro/Makefile
+++ b/astro/gnuastro/Makefile
@@ -3,7 +3,7 @@
PORTNAME= gnuastro
PORTVERSION= 0.10
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= astro
MASTER_SITES= GNU
diff --git a/astro/siril/Makefile b/astro/siril/Makefile
index 314b5f88b268..f63bbdbbab48 100644
--- a/astro/siril/Makefile
+++ b/astro/siril/Makefile
@@ -2,7 +2,7 @@
PORTNAME= siril
DISTVERSION= 0.9.10
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= astro graphics
MASTER_SITES= https://free-astro.org/download/
diff --git a/audio/p5-Audio/Makefile b/audio/p5-Audio/Makefile
index fecaffdd097e..64255bcab33c 100644
--- a/audio/p5-Audio/Makefile
+++ b/audio/p5-Audio/Makefile
@@ -3,7 +3,7 @@
PORTNAME= Audio
PORTVERSION= 1.029
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= audio perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/audio/snd/Makefile b/audio/snd/Makefile
index 913d0ba158a1..e8316e1516cc 100644
--- a/audio/snd/Makefile
+++ b/audio/snd/Makefile
@@ -3,7 +3,7 @@
PORTNAME= snd
PORTVERSION= 15.7
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= audio
MASTER_SITES= ftp://ccrma-ftp.stanford.edu/pub/Lisp/ \
SF
diff --git a/benchmarks/flowgrind/Makefile b/benchmarks/flowgrind/Makefile
index 35c58eeb0b03..8e9b91c206c9 100644
--- a/benchmarks/flowgrind/Makefile
+++ b/benchmarks/flowgrind/Makefile
@@ -4,7 +4,7 @@
PORTNAME= flowgrind
PORTVERSION= 0.8.0
DISTVERSIONPREFIX= ${PORTNAME}-
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= benchmarks
MAINTAINER= dbaio@FreeBSD.org
diff --git a/biology/bcftools/Makefile b/biology/bcftools/Makefile
index c9cac440562f..0ae73933e5d2 100644
--- a/biology/bcftools/Makefile
+++ b/biology/bcftools/Makefile
@@ -3,6 +3,7 @@
PORTNAME= bcftools
PORTVERSION= 1.9
+PORTREVISION= 1
CATEGORIES= biology
MAINTAINER= cartwright@asu.edu
diff --git a/biology/gemma/Makefile b/biology/gemma/Makefile
index 72634c0e3506..ada67a32f052 100644
--- a/biology/gemma/Makefile
+++ b/biology/gemma/Makefile
@@ -2,7 +2,7 @@
PORTNAME= gemma
DISTVERSION= 0.98.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
@@ -26,6 +26,8 @@ LDFLAGS+= -lopenblas
OPTIONS_DEFINE= EXAMPLES
+BROKEN= Conflict between math/gsl and math/cblas constant redeclarations
+
pre-configure:
@${REINPLACE_CMD} -e 's|../bin/gemma|../gemma|' ${WRKSRC}/test/*.sh
diff --git a/biology/viennarna/Makefile b/biology/viennarna/Makefile
index e59497145a19..c0d295bb852c 100644
--- a/biology/viennarna/Makefile
+++ b/biology/viennarna/Makefile
@@ -2,7 +2,7 @@
PORTNAME= viennarna
DISTVERSION= 2.4.13
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_4_x/
DISTNAME= ViennaRNA-${DISTVERSION}
diff --git a/comms/gnuradio/Makefile b/comms/gnuradio/Makefile
index d0b15dd9cc93..e8b07bc5688e 100644
--- a/comms/gnuradio/Makefile
+++ b/comms/gnuradio/Makefile
@@ -2,7 +2,7 @@
PORTNAME= gnuradio
PORTVERSION= 3.8.0.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= comms astro hamradio
MASTER_SITES= http://gnuradio.org/releases/gnuradio/
diff --git a/editors/calligra/Makefile b/editors/calligra/Makefile
index 16dd25fbaf3b..701b7037368c 100644
--- a/editors/calligra/Makefile
+++ b/editors/calligra/Makefile
@@ -2,7 +2,7 @@
PORTNAME= calligra
DISTVERSION= 3.1.0
-PORTREVISION= 25
+PORTREVISION= 26
CATEGORIES= editors kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}
diff --git a/graphics/enblend/Makefile b/graphics/enblend/Makefile
index 766e0516f888..62f5f8dc3c99 100644
--- a/graphics/enblend/Makefile
+++ b/graphics/enblend/Makefile
@@ -3,7 +3,7 @@
PORTNAME= enblend
PORTVERSION= 4.2
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= graphics
MASTER_SITES= SF/enblend/enblend-enfuse/enblend-enfuse-${PORTVERSION}
DISTNAME= enblend-enfuse-${PORTVERSION}
diff --git a/graphics/inkscape/Makefile b/graphics/inkscape/Makefile
index 9b095231a53d..82d127867c9e 100644
--- a/graphics/inkscape/Makefile
+++ b/graphics/inkscape/Makefile
@@ -3,7 +3,7 @@
PORTNAME= inkscape
PORTVERSION= 0.92.4
-PORTREVISION= 9
+PORTREVISION= 10
CATEGORIES= graphics gnome
MASTER_SITES= https://media.inkscape.org/dl/resources/file/
diff --git a/graphics/krita/Makefile b/graphics/krita/Makefile
index 65b5ef83aa50..5c8083b7f6b2 100644
--- a/graphics/krita/Makefile
+++ b/graphics/krita/Makefile
@@ -2,7 +2,7 @@
PORTNAME= krita
DISTVERSION= 4.2.6
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics kde
MASTER_SITES= KDE/stable/${PORTNAME}/${DISTVERSION}
DIST_SUBDIR= KDE/${PORTNAME}
diff --git a/graphics/luminance-qt5/Makefile b/graphics/luminance-qt5/Makefile
index b1eb98e093a3..6d949534b343 100644
--- a/graphics/luminance-qt5/Makefile
+++ b/graphics/luminance-qt5/Makefile
@@ -3,7 +3,7 @@
PORTNAME= luminance-hdr
DISTVERSION= 2.5.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= graphics
MASTER_SITES= SF/qtpfsgui/luminance/${DISTVERSION}
PKGNAMESUFFIX= -qt5
diff --git a/graphics/mandelbulber/Makefile b/graphics/mandelbulber/Makefile
index 3962e456162e..5b3398fcf5f7 100644
--- a/graphics/mandelbulber/Makefile
+++ b/graphics/mandelbulber/Makefile
@@ -3,7 +3,7 @@
PORTNAME= mandelbulber
DISTVERSION= 2.19
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics
MAINTAINER= amdmi3@FreeBSD.org
diff --git a/graphics/nip2/Makefile b/graphics/nip2/Makefile
index 66b641e75c6e..a4bd1d74a42b 100644
--- a/graphics/nip2/Makefile
+++ b/graphics/nip2/Makefile
@@ -3,7 +3,7 @@
PORTNAME= nip2
PORTVERSION= 8.7.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics
MASTER_SITES= https://github.com/libvips/${PORTNAME}/releases/download/v${PORTVERSION}/
diff --git a/graphics/pfstools/Makefile b/graphics/pfstools/Makefile
index 094329f85ce1..68b6e374d236 100644
--- a/graphics/pfstools/Makefile
+++ b/graphics/pfstools/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pfstools
DISTVERSION= 2.1.0
-PORTREVISION= 5
+PORTREVISION= 6
CATEGORIES= graphics
MASTER_SITES= SF
diff --git a/graphics/qgis-ltr/Makefile b/graphics/qgis-ltr/Makefile
index f160c554c4dd..bd69543791d9 100644
--- a/graphics/qgis-ltr/Makefile
+++ b/graphics/qgis-ltr/Makefile
@@ -4,7 +4,7 @@
PORTNAME= qgis
DISTVERSIONPREFIX= final-
DISTVERSION= 3_4_11
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= graphics geography
PKGNAMESUFFIX= -ltr
diff --git a/graphics/qgis/Makefile b/graphics/qgis/Makefile
index 971f3290c353..fe9f6b30a8c7 100644
--- a/graphics/qgis/Makefile
+++ b/graphics/qgis/Makefile
@@ -4,6 +4,7 @@
PORTNAME= qgis
DISTVERSIONPREFIX= final-
DISTVERSION= 3_8_2
+PORTREVISION= 1
CATEGORIES= graphics geography
MAINTAINER= rhurlin@gwdg.de
diff --git a/graphics/xaos/Makefile b/graphics/xaos/Makefile
index 420f2142f817..f7a8e6a47e58 100644
--- a/graphics/xaos/Makefile
+++ b/graphics/xaos/Makefile
@@ -3,7 +3,7 @@
PORTNAME= xaos
PORTVERSION= 3.6
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= graphics math
MASTER_SITES= SF/${PORTNAME}/XaoS/${PORTVERSION}
diff --git a/lang/algol68g/Makefile b/lang/algol68g/Makefile
index 77c04fefb539..be89cfd41c75 100644
--- a/lang/algol68g/Makefile
+++ b/lang/algol68g/Makefile
@@ -2,7 +2,7 @@
PORTNAME= algol68g
PORTVERSION= 2.8.4
-PORTREVISION= 7
+PORTREVISION= 8
CATEGORIES= lang
MASTER_SITES= http://jmvdveer.home.xs4all.nl/
diff --git a/mail/bogofilter-kc/Makefile b/mail/bogofilter-kc/Makefile
index ccb996740319..8b20dfb0368e 100644
--- a/mail/bogofilter-kc/Makefile
+++ b/mail/bogofilter-kc/Makefile
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -kc
diff --git a/mail/bogofilter-lmdb/Makefile b/mail/bogofilter-lmdb/Makefile
index 82105fd495b8..8e3f2f7baea4 100644
--- a/mail/bogofilter-lmdb/Makefile
+++ b/mail/bogofilter-lmdb/Makefile
@@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -lmdb
diff --git a/mail/bogofilter-sqlite/Makefile b/mail/bogofilter-sqlite/Makefile
index b2b9b64873cc..b7ab6dd50997 100644
--- a/mail/bogofilter-sqlite/Makefile
+++ b/mail/bogofilter-sqlite/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -sqlite
diff --git a/mail/bogofilter-tc/Makefile b/mail/bogofilter-tc/Makefile
index 6780f0c5f907..b1e9e626c2d9 100644
--- a/mail/bogofilter-tc/Makefile
+++ b/mail/bogofilter-tc/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= bogofilter
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= mail
PKGNAMESUFFIX= -tc
diff --git a/mail/bogofilter/Makefile b/mail/bogofilter/Makefile
index 60e165451c26..fd9754f1174e 100644
--- a/mail/bogofilter/Makefile
+++ b/mail/bogofilter/Makefile
@@ -3,7 +3,7 @@
PORTNAME= bogofilter
DISTVERSION= 1.2.5
-PORTREVISION?= 0
+PORTREVISION?= 1
CATEGORIES?= mail
MASTER_SITES= SF/bogofilter/bogofilter-stable/
diff --git a/math/asymptote/Makefile b/math/asymptote/Makefile
index 5eb8c5d991b7..9e1cf5782ac8 100644
--- a/math/asymptote/Makefile
+++ b/math/asymptote/Makefile
@@ -3,7 +3,7 @@
PORTNAME= asymptote
PORTVERSION= 2.56
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= SF/${PORTNAME}/${PORTVERSION}
DISTNAME= ${PORTNAME}-${PORTVERSION}.src
diff --git a/math/deal.ii/Makefile b/math/deal.ii/Makefile
index 512f5e98061d..3c4c9c669e06 100644
--- a/math/deal.ii/Makefile
+++ b/math/deal.ii/Makefile
@@ -3,7 +3,7 @@
PORTNAME= deal.II
DISTVERSIONPREFIX= v
DISTVERSION= 9.1.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
diff --git a/math/dieharder/Makefile b/math/dieharder/Makefile
index 5305a88bfdc0..b41f4077ed7c 100644
--- a/math/dieharder/Makefile
+++ b/math/dieharder/Makefile
@@ -3,7 +3,7 @@
PORTNAME= dieharder
PORTVERSION= 3.31.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MASTER_SITES= http://www.phy.duke.edu/~rgb/General/dieharder/ LOCAL/bf
diff --git a/math/fflas-ffpack/Makefile b/math/fflas-ffpack/Makefile
index 4c25ed7a377a..668c936ea5e1 100644
--- a/math/fflas-ffpack/Makefile
+++ b/math/fflas-ffpack/Makefile
@@ -3,7 +3,7 @@
PORTNAME= fflas-ffpack
PORTVERSION= 1.4.3
-PORTREVISION= 16
+PORTREVISION= 17
CATEGORIES= math
MASTER_SITES= http://linalg.org/ LOCAL/bf
diff --git a/math/giacxcas/Makefile b/math/giacxcas/Makefile
index 9ba520146426..66cb48d6faa4 100644
--- a/math/giacxcas/Makefile
+++ b/math/giacxcas/Makefile
@@ -3,6 +3,7 @@
PORTNAME= giacxcas
DISTVERSION= 1.5.0-67
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= http://www-fourier.ujf-grenoble.fr/~parisse/debian/dists/stable/main/source/:giac \
http://www-fourier.ujf-grenoble.fr/~parisse/giac/freebsd/
diff --git a/math/gsl/Makefile b/math/gsl/Makefile
index 7cc00fab520b..558da29aee96 100644
--- a/math/gsl/Makefile
+++ b/math/gsl/Makefile
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= gsl
-PORTVERSION= 2.5
-PORTREVISION= 1
+PORTVERSION= 2.6
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/gsl/distinfo b/math/gsl/distinfo
index 51580cef2e74..bbf53b1b2661 100644
--- a/math/gsl/distinfo
+++ b/math/gsl/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1529158403
-SHA256 (gsl-2.5.tar.gz) = 0460ad7c2542caaddc6729762952d345374784100223995eb14d614861f2258d
-SIZE (gsl-2.5.tar.gz) = 7303881
+TIMESTAMP = 1566551853
+SHA256 (gsl-2.6.tar.gz) = b782339fc7a38fe17689cb39966c4d821236c28018b6593ddb6fd59ee40786a8
+SIZE (gsl-2.6.tar.gz) = 7398548
diff --git a/math/gsl/pkg-plist b/math/gsl/pkg-plist
index de5c97ccdbce..507c6fd2ee47 100644
--- a/math/gsl/pkg-plist
+++ b/math/gsl/pkg-plist
@@ -19,6 +19,10 @@ include/gsl/gsl_block_uint.h
include/gsl/gsl_block_ulong.h
include/gsl/gsl_block_ushort.h
include/gsl/gsl_bspline.h
+include/gsl/gsl_bst.h
+include/gsl/gsl_bst_avl.h
+include/gsl/gsl_bst_rb.h
+include/gsl/gsl_bst_types.h
include/gsl/gsl_cblas.h
include/gsl/gsl_cdf.h
include/gsl/gsl_chebyshev.h
@@ -213,6 +217,20 @@ include/gsl/gsl_splinalg.h
include/gsl/gsl_spline.h
include/gsl/gsl_spline2d.h
include/gsl/gsl_spmatrix.h
+include/gsl/gsl_spmatrix_char.h
+include/gsl/gsl_spmatrix_complex_double.h
+include/gsl/gsl_spmatrix_complex_float.h
+include/gsl/gsl_spmatrix_complex_long_double.h
+include/gsl/gsl_spmatrix_double.h
+include/gsl/gsl_spmatrix_float.h
+include/gsl/gsl_spmatrix_int.h
+include/gsl/gsl_spmatrix_long.h
+include/gsl/gsl_spmatrix_long_double.h
+include/gsl/gsl_spmatrix_short.h
+include/gsl/gsl_spmatrix_uchar.h
+include/gsl/gsl_spmatrix_uint.h
+include/gsl/gsl_spmatrix_ulong.h
+include/gsl/gsl_spmatrix_ushort.h
include/gsl/gsl_statistics.h
include/gsl/gsl_statistics_char.h
include/gsl/gsl_statistics_double.h
@@ -250,8 +268,8 @@ include/gsl/gsl_wavelet.h
include/gsl/gsl_wavelet2d.h
lib/libgsl.a
lib/libgsl.so
-lib/libgsl.so.23
-lib/libgsl.so.23.1.0
+lib/libgsl.so.25
+lib/libgsl.so.25.0.0
lib/libgslcblas.a
lib/libgslcblas.so
lib/libgslcblas.so.0
diff --git a/math/labplot/Makefile b/math/labplot/Makefile
index 7e9dc9c4b4d3..7ebc4a6f079b 100644
--- a/math/labplot/Makefile
+++ b/math/labplot/Makefile
@@ -3,6 +3,7 @@
PORTNAME= labplot
PORTVERSION= 2.7.0
+PORTREVISION= 1
CATEGORIES= math kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
diff --git a/math/mandelbulber2/Makefile b/math/mandelbulber2/Makefile
index 761a3363677f..811d6e25db76 100644
--- a/math/mandelbulber2/Makefile
+++ b/math/mandelbulber2/Makefile
@@ -2,7 +2,7 @@
PORTNAME= mandelbulber2
DISTVERSION= 2.19
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
diff --git a/math/mathgl/Makefile b/math/mathgl/Makefile
index 8350ddde4c4d..e335ee69ca1b 100644
--- a/math/mathgl/Makefile
+++ b/math/mathgl/Makefile
@@ -2,6 +2,7 @@
PORTNAME= mathgl
DISTVERSION= 2.4.4
+PORTREVISION= 1
CATEGORIES= math graphics
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION}/
diff --git a/math/mcsim/Makefile b/math/mcsim/Makefile
index 330a9486ecb0..3d2eccca0c51 100644
--- a/math/mcsim/Makefile
+++ b/math/mcsim/Makefile
@@ -3,6 +3,7 @@
PORTNAME= mcsim
PORTVERSION= 6.1.0
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/ocamlgsl/Makefile b/math/ocamlgsl/Makefile
index 1bd447fb90b8..6646945c0f6e 100644
--- a/math/ocamlgsl/Makefile
+++ b/math/ocamlgsl/Makefile
@@ -4,7 +4,7 @@
PORTNAME= ocaml-gsl
DISTVERSIONPREFIX=v
DISTVERSION= 1.19.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= michipili@gmail.com
diff --git a/math/octave-forge-gsl/Makefile b/math/octave-forge-gsl/Makefile
index d56b96856660..7078bebad156 100644
--- a/math/octave-forge-gsl/Makefile
+++ b/math/octave-forge-gsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= octave-forge-gsl
PORTVERSION= 2.1.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/orpie/Makefile b/math/orpie/Makefile
index ac60a9ffa9c9..4440bdeca241 100644
--- a/math/orpie/Makefile
+++ b/math/orpie/Makefile
@@ -3,7 +3,7 @@
PORTNAME= orpie
PORTVERSION= 1.5.2
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES+= math
MASTER_SITES= GENTOO http://pessimization.com/software/orpie/
diff --git a/math/p5-Algorithm-KMeans/Makefile b/math/p5-Algorithm-KMeans/Makefile
index b103d9a37901..bc0ff1c64bac 100644
--- a/math/p5-Algorithm-KMeans/Makefile
+++ b/math/p5-Algorithm-KMeans/Makefile
@@ -2,6 +2,7 @@
PORTNAME= Algorithm-KMeans
PORTVERSION= 2.05
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
MASTER_SITE_SUBDIR= CPAN:AVIKAK
diff --git a/math/p5-Math-GSL/Makefile b/math/p5-Math-GSL/Makefile
index 4bfaec297e2e..ec50f7aa1fab 100644
--- a/math/p5-Math-GSL/Makefile
+++ b/math/p5-Math-GSL/Makefile
@@ -3,6 +3,7 @@
PORTNAME= Math-GSL
PORTVERSION= 0.40
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
@@ -23,6 +24,8 @@ TEST_DEPENDS= p5-Test-Class>=0.12:devel/p5-Test-Class \
USES= perl5
USE_PERL5= modbuild
+BROKEN= Does not work with gsl-2.6
+
post-install:
${FIND} ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/GSL/ -name "*.so" -exec ${STRIP_CMD} {} +
diff --git a/math/pspp/Makefile b/math/pspp/Makefile
index 61c4625a44e3..484d83c25571 100644
--- a/math/pspp/Makefile
+++ b/math/pspp/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pspp
PORTVERSION= 1.2.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/py-cvxopt/Makefile b/math/py-cvxopt/Makefile
index ea31161dfac1..7883a14206cf 100644
--- a/math/py-cvxopt/Makefile
+++ b/math/py-cvxopt/Makefile
@@ -2,7 +2,7 @@
PORTNAME= cvxopt
DISTVERSION= 1.2.3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-pygsl/Makefile b/math/py-pygsl/Makefile
index a3444dc33a81..f6dc7d2f190e 100644
--- a/math/py-pygsl/Makefile
+++ b/math/py-pygsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pygsl
PORTVERSION= 2.3.0
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= math python
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-${PORTVERSION}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-pygslodeiv2/Makefile b/math/py-pygslodeiv2/Makefile
index 69d6c7d24e55..f2fe13139443 100644
--- a/math/py-pygslodeiv2/Makefile
+++ b/math/py-pygslodeiv2/Makefile
@@ -2,7 +2,7 @@
PORTNAME= pygslodeiv2
DISTVERSION= 0.9.2
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/rubygem-rb-gsl/Makefile b/math/rubygem-rb-gsl/Makefile
index 48cf161b34fb..8dc69f39a637 100644
--- a/math/rubygem-rb-gsl/Makefile
+++ b/math/rubygem-rb-gsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= gsl
PORTVERSION= 2.1.0.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math rubygems
MASTER_SITES= RG
PKGNAMEPREFIX= rubygem-rb-
diff --git a/misc/visp/Makefile b/misc/visp/Makefile
index b86a3b70c70a..6d2ee30aee65 100644
--- a/misc/visp/Makefile
+++ b/misc/visp/Makefile
@@ -2,7 +2,7 @@
PORTNAME= visp
DISTVERSION= 3.2.0
-PORTREVISION= 5
+PORTREVISION= 6
CATEGORIES= misc
MASTER_SITES= http://gforge.inria.fr/frs/download.php/latestfile/475/
diff --git a/science/afni/Makefile b/science/afni/Makefile
index ea801377e0ad..14a61e621178 100644
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@@ -3,7 +3,7 @@
PORTNAME= afni
DISTVERSIONPREFIX= AFNI_
DISTVERSION= 19.1.20
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= science biology graphics perl5 python
MAINTAINER= jwb@FreeBSD.org
diff --git a/science/antioch/Makefile b/science/antioch/Makefile
index 601d754ab8ae..4c5617318d85 100644
--- a/science/antioch/Makefile
+++ b/science/antioch/Makefile
@@ -4,7 +4,7 @@ PORTNAME= antioch
DISTVERSIONPREFIX= v
DISTVERSION= 0.4.0-156
DISTVERSIONSUFFIX= -g90ffa43
-PORTREVISION= 7
+PORTREVISION= 8
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org
diff --git a/science/coot/Makefile b/science/coot/Makefile
index b8345de95a11..8e622a3ccdec 100644
--- a/science/coot/Makefile
+++ b/science/coot/Makefile
@@ -2,7 +2,7 @@
PORTNAME= coot
DISTVERSION= 0.8.9.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MASTER_SITES= https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/source/releases/ \
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/${PORTNAME}/dependencies/:data
diff --git a/science/erkale/Makefile b/science/erkale/Makefile
index ef685d4b723a..3273057bd7b7 100644
--- a/science/erkale/Makefile
+++ b/science/erkale/Makefile
@@ -2,7 +2,7 @@
PORTNAME= erkale
DISTVERSION= g20190812
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org
diff --git a/science/fisicalab/Makefile b/science/fisicalab/Makefile
index 7b063f33a7e9..ca36867032ff 100644
--- a/science/fisicalab/Makefile
+++ b/science/fisicalab/Makefile
@@ -2,7 +2,7 @@
PORTNAME= fisicalab
PORTVERSION= 0.3.3
-PORTREVISION= 10
+PORTREVISION= 11
CATEGORIES= science gnustep
MASTER_SITES= SAVANNAH
diff --git a/science/getdp/Makefile b/science/getdp/Makefile
index 442768767019..cd4f45d0cf12 100644
--- a/science/getdp/Makefile
+++ b/science/getdp/Makefile
@@ -3,7 +3,7 @@
PORTNAME= getdp
PORTVERSION= 3.2.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= science
MASTER_SITES= http://www.geuz.org/getdp/src/
DISTNAME= ${PORTNAME}-${PORTVERSION}-source
diff --git a/science/gnudatalanguage/Makefile b/science/gnudatalanguage/Makefile
index 3e0d47ea938d..d442b8d94268 100644
--- a/science/gnudatalanguage/Makefile
+++ b/science/gnudatalanguage/Makefile
@@ -4,7 +4,7 @@
PORTNAME= gnudatalanguage
PORTVERSION= 0.9.9
DISTVERSIONPREFIX= v
-PORTREVISION= 10
+PORTREVISION= 11
CATEGORIES= science lang
.if defined(BUILD_PYTHON_MODULE)
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/science/jdftx/Makefile b/science/jdftx/Makefile
index 729aa0ecb6b4..a519e22ed8a7 100644
--- a/science/jdftx/Makefile
+++ b/science/jdftx/Makefile
@@ -3,6 +3,7 @@
PORTNAME= jdftx
DISTVERSIONPREFIX= v
DISTVERSION= 1.5.0
+PORTREVISION= 1
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org
diff --git a/science/kst2/Makefile b/science/kst2/Makefile
index aa02cacdac1b..4db0bfd108b8 100644
--- a/science/kst2/Makefile
+++ b/science/kst2/Makefile
@@ -3,7 +3,7 @@
PORTNAME= kst
DISTVERSION= ${KST_VERSION}.${KST_DATE}
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= makc@FreeBSD.org
diff --git a/science/meep/Makefile b/science/meep/Makefile
index 7403d470e8c2..8c3719ed0351 100644
--- a/science/meep/Makefile
+++ b/science/meep/Makefile
@@ -3,7 +3,7 @@
PORTNAME= meep
PORTVERSION= 1.2.1
-PORTREVISION= 19
+PORTREVISION= 20
CATEGORIES= science
MASTER_SITES= http://ab-initio.mit.edu/meep/
diff --git a/science/nest/Makefile b/science/nest/Makefile
index cf733d929da0..8c2c9b0b0d68 100644
--- a/science/nest/Makefile
+++ b/science/nest/Makefile
@@ -3,7 +3,7 @@
PORTNAME= nest
DISTVERSIONPREFIX= v
DISTVERSION= 2.18.0
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science biology # NEST is used in neuroscience
PATCH_SITES= https://github.com/${GH_ACCOUNT}/${GH_PROJECT}/commit/
diff --git a/science/octopus/Makefile b/science/octopus/Makefile
index 4872b475e3af..ad4024466a3f 100644
--- a/science/octopus/Makefile
+++ b/science/octopus/Makefile
@@ -2,7 +2,7 @@
PORTNAME= octopus
DISTVERSION= 8.4
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MASTER_SITES= http://www.tddft.org/programs/${PORTNAME}/download/${DISTVERSION}/
diff --git a/science/py-mlpy/Makefile b/science/py-mlpy/Makefile
index a31adba4c707..a4aa1bd1294c 100644
--- a/science/py-mlpy/Makefile
+++ b/science/py-mlpy/Makefile
@@ -3,7 +3,7 @@
PORTNAME= mlpy
PORTVERSION= 3.5.0
-PORTREVISION= 8
+PORTREVISION= 9
CATEGORIES= science python
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}%20${PORTVERSION}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/science/scidavis/Makefile b/science/scidavis/Makefile
index 3af83629f40c..ab18ad30d493 100644
--- a/science/scidavis/Makefile
+++ b/science/scidavis/Makefile
@@ -2,7 +2,7 @@
PORTNAME= scidavis
PORTVERSION= 2.0.1
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MAINTAINER= makc@FreeBSD.org
diff --git a/science/step/Makefile b/science/step/Makefile
index ff19c7c95625..a019788e7962 100644
--- a/science/step/Makefile
+++ b/science/step/Makefile
@@ -2,6 +2,7 @@
PORTNAME= step
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
+PORTREVISION= 1
CATEGORIES= science kde kde-applications
MAINTAINER= kde@FreeBSD.org