diff options
Diffstat (limited to 'biology/blat/Makefile')
| -rw-r--r-- | biology/blat/Makefile | 57 |
1 files changed, 57 insertions, 0 deletions
diff --git a/biology/blat/Makefile b/biology/blat/Makefile new file mode 100644 index 000000000000..8e96c552e4d9 --- /dev/null +++ b/biology/blat/Makefile @@ -0,0 +1,57 @@ +# ex:ts=8 +# New ports collection makefile for: blat +# Date created: 08 Dec 2005 +# Whom: Fernan Aguero <fernan@iib.unsam.edu.ar> +# +# $FreeBSD$ +# + +PORTNAME= blat +PORTVERSION= 33 +CATEGORIES= biology +MASTER_SITES= http://www.soe.ucsc.edu/~kent/src/ +DISTNAME= ${PORTNAME}Src${PORTVERSION} + +MAINTAINER= fernan@iib.unsam.edu.ar +COMMENT= A fast tool for local sequence similarity searches + +USE_ZIP= yes +USE_GMAKE= yes +USE_GCC= 3.4+ +MAKEFILE= makefile +WRKSRC= ${WRKDIR}/${PORTNAME}Src +MAKE_ENV+= HOME="${WRKSRC}/${BINDIR}" + +SUB_FILES= pkg-message + +EXECUTABLES= blat faToNib faToTwoBit gfClient gfServer nibFrag \ + pslPretty pslReps pslSort twoBitInfo twoBitToFa + +.include <bsd.port.pre.mk> + +post-patch: + @${MKDIR} ${WRKSRC}/bin/${MACHTYPE} + @${MKDIR} ${WRKSRC}/lib/${MACHTYPE} + @${REINPLACE_CMD} -E 's,^(CC|CFLAGS)=,\1 ?=,g' \ + ${WRKSRC}/inc/common.mk +.if ${OSVERSION} <= 500000 + @${REINPLACE_CMD} -e 's,strtof,\(float\) strtod,g' \ + ${WRKSRC}/lib/sqlNum.c +.endif + +do-install: +.for exe in ${EXECUTABLES} + ${INSTALL_PROGRAM} ${WRKSRC}/bin/${MACHTYPE}/${exe} ${PREFIX}/bin +.endfor + ${MKDIR} ${DATADIR}/webBlat + ${INSTALL_PROGRAM} ${WRKSRC}/webBlat/webBlat ${DATADIR}/webBlat + ${INSTALL_DATA} ${WRKSRC}/webBlat/install.txt ${DATADIR}/webBlat +.if !defined(NOPORTDOCS) + ${MKDIR} ${DOCSDIR} + ${INSTALL_DATA} ${WRKSRC}/README ${DOCSDIR} +.endif + +post-install: + @${CAT} ${PKGMESSAGE} + +.include <bsd.port.post.mk> |