diff options
Diffstat (limited to 'biology/ruby-bio')
| -rw-r--r-- | biology/ruby-bio/Makefile | 4 | ||||
| -rw-r--r-- | biology/ruby-bio/distinfo | 2 | ||||
| -rw-r--r-- | biology/ruby-bio/pkg-plist | 10 |
3 files changed, 13 insertions, 3 deletions
diff --git a/biology/ruby-bio/Makefile b/biology/ruby-bio/Makefile index a874105c9c21..5e8c73271a83 100644 --- a/biology/ruby-bio/Makefile +++ b/biology/ruby-bio/Makefile @@ -6,7 +6,7 @@ # PORTNAME= bio -PORTVERSION= 0.3.3 +PORTVERSION= 0.3.5 CATEGORIES= biology ruby MASTER_SITES= ftp://ftp.bioruby.org/bioruby/src/ MASTER_SITE_SUBDIR= knu @@ -28,7 +28,7 @@ do-install: ${MKDIR} ${RUBY_EXAMPLESDIR}/${PORTNAME} ${CP} -R ${WRKSRC}/sample/ ${RUBY_EXAMPLESDIR}/${PORTNAME}/ ${MKDIR} ${RUBY_DOCDIR}/${PORTNAME}/ja - ${CP} -R ${WRKSRC}/README ${RUBY_DOCDIR}/${PORTNAME}/ + ${INSTALL_DATA} ${WRKSRC}/ChangeLog ${WRKSRC}/README ${RUBY_DOCDIR}/${PORTNAME}/ ${INSTALL_DATA} ${WRKSRC}/doc/*.ja ${RUBY_DOCDIR}/${PORTNAME}/ja/ .endif diff --git a/biology/ruby-bio/distinfo b/biology/ruby-bio/distinfo index 75f7b5305395..713016267be8 100644 --- a/biology/ruby-bio/distinfo +++ b/biology/ruby-bio/distinfo @@ -1 +1 @@ -MD5 (ruby/bioruby-0.3.3.tgz) = 47e96795361c1f0299d07ea678b15bd0 +MD5 (ruby/bioruby-0.3.5.tgz) = 75e3a72a00051e32086200090a3e3a21 diff --git a/biology/ruby-bio/pkg-plist b/biology/ruby-bio/pkg-plist index 0601cc40ffa6..5b2b13b51ef3 100644 --- a/biology/ruby-bio/pkg-plist +++ b/biology/ruby-bio/pkg-plist @@ -1,3 +1,4 @@ +bin/biofetch bin/dbget %%RUBY_SITELIBDIR%%/bio.rb %%RUBY_SITELIBDIR%%/bio/appl/blast.rb @@ -28,9 +29,15 @@ bin/dbget %%RUBY_SITELIBDIR%%/bio/db/swissprot.rb %%RUBY_SITELIBDIR%%/bio/db/transfac.rb %%RUBY_SITELIBDIR%%/bio/db/trembl.rb +%%RUBY_SITELIBDIR%%/bio/feature.rb +%%RUBY_SITELIBDIR%%/bio/id.rb +%%RUBY_SITELIBDIR%%/bio/io/brdb.rb %%RUBY_SITELIBDIR%%/bio/io/dbget.rb +%%RUBY_SITELIBDIR%%/bio/io/fetch.rb %%RUBY_SITELIBDIR%%/bio/io/flatfile.rb %%RUBY_SITELIBDIR%%/bio/io/pubmed.rb +%%RUBY_SITELIBDIR%%/bio/io/registry.rb +%%RUBY_SITELIBDIR%%/bio/io/sql.rb %%RUBY_SITELIBDIR%%/bio/location.rb %%RUBY_SITELIBDIR%%/bio/matrix.rb %%RUBY_SITELIBDIR%%/bio/pathway.rb @@ -45,6 +52,7 @@ bin/dbget @dirrm %%RUBY_SITELIBDIR%%/bio/io @dirrm %%RUBY_SITELIBDIR%%/bio/util @dirrm %%RUBY_SITELIBDIR%%/bio +%%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/biofetch.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/fasta2tab.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/fsplit.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/gb2fasta.rb @@ -52,12 +60,14 @@ bin/dbget %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/genes2nuc.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/genes2pep.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/genes2tab.rb +%%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/genome2rb.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/genome2tab.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/gt2fasta.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/ssearch2tab.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/tfastx2tab.rb %%PORTDOCS%%%%RUBY_EXAMPLESDIR%%/bio/vs-genes.rb %%PORTDOCS%%@dirrm %%RUBY_EXAMPLESDIR%%/bio +%%PORTDOCS%%%%RUBY_DOCDIR%%/bio/ChangeLog %%PORTDOCS%%%%RUBY_DOCDIR%%/bio/README %%PORTDOCS%%%%RUBY_DOCDIR%%/bio/ja/BioRuby.rd.ja %%PORTDOCS%%%%RUBY_DOCDIR%%/bio/ja/Design.rd.ja |