diff options
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/boinc-simap/Makefile | 20 | ||||
| -rw-r--r-- | biology/boinc-simap/distinfo | 6 | ||||
| -rw-r--r-- | biology/boinc-simap/files/app_info.xml.in | 21 | ||||
| -rw-r--r-- | biology/boinc-simap/pkg-plist | 1 |
4 files changed, 38 insertions, 10 deletions
diff --git a/biology/boinc-simap/Makefile b/biology/boinc-simap/Makefile index a7bd479be2d2..b765a9f23046 100644 --- a/biology/boinc-simap/Makefile +++ b/biology/boinc-simap/Makefile @@ -5,10 +5,10 @@ # PORTNAME= boinc-simap -PORTVERSION= 5.10 +PORTVERSION= ${SIMAP_VERSION}.${HMMER_VERSION} CATEGORIES= biology MASTER_SITES= http://boinc.bio.wzw.tum.de/boincsimap/download/ -DISTNAME= simap_${PORTVERSION}_${MACH}-pc-freebsd +DISTNAME= ${SIMAP_BINARY} ${HMMER_BINARY} EXTRACT_SUFX= # MAINTAINER= pav@FreeBSD.org @@ -27,9 +27,12 @@ BOINC_HOME?= /var/db/boinc SIMAP_SITE= boinc.bio.wzw.tum.de_boincsimap SIMAP_URL= boinc.bio.wzw.tum.de/boincsimap -SIMAP_BINARY= ${DISTNAME} +SIMAP_BINARY= simap_${SIMAP_VERSION}_${MACH}-pc-freebsd +SIMAP_VERSION= 5.10 +HMMER_BINARY= hmmer_${HMMER_VERSION}_${MACH}-pc-freebsd +HMMER_VERSION= 5.09 -PLIST_SUB= SIMAP_BINARY=${SIMAP_BINARY} SIMAP_SITE=${SIMAP_SITE} \ +PLIST_SUB= SIMAP_BINARY=${SIMAP_BINARY} HMMER_BINARY=${HMMER_BINARY} SIMAP_SITE=${SIMAP_SITE} \ BOINC_HOME=${BOINC_HOME} ONLY_FOR_ARCHS= i386 amd64 @@ -51,7 +54,7 @@ AMD64= "@comment " .endif SUB_FILES= app_info.xml pkg-message -SUB_LIST= DISTNAME=${DISTNAME} APPVERSION=${PORTVERSION:S/.//} AMD64=${AMD64} +SUB_LIST= SIMAP_BINARY=${SIMAP_BINARY} HMMER_BINARY=${HMMER_BINARY} SIMAP_APPVERSION=${SIMAP_VERSION:S/.//} HMMER_APPVERSION=${HMMER_VERSION:S/.//} AMD64=${AMD64} .if ${OSVERSION} < 600000 IGNORE= only supports FreeBSD 6.X and newer @@ -59,13 +62,16 @@ IGNORE= only supports FreeBSD 6.X and newer do-extract: @${MKDIR} ${WRKDIR} - @${CP} ${DISTDIR}/${DISTNAME} ${WRKDIR} + @${CP} ${DISTDIR}/${SIMAP_BINARY} ${WRKDIR} + @(cd ${WRKDIR} && ${EXTRACT_CMD} ${EXTRACT_BEFORE_ARGS} ${DISTDIR}/${HMMER_BINARY} ${EXTRACT_AFTER_ARGS}) do-install: ${INSTALL} -d -o ${BOINC_USER} -g ${BOINC_GROUP} ${BOINC_HOME}/projects ${INSTALL} -d -o ${BOINC_USER} -g ${BOINC_GROUP} ${BOINC_HOME}/projects/${SIMAP_SITE} ${INSTALL_DATA} -o ${BOINC_USER} -g ${BOINC_GROUP} ${WRKDIR}/app_info.xml ${BOINC_HOME}/projects/${SIMAP_SITE} - ${INSTALL_PROGRAM} -o ${BOINC_USER} -g ${BOINC_GROUP} ${WRKDIR}/${SIMAP_BINARY} ${BOINC_HOME}/projects/${SIMAP_SITE} +.for APP in ${DISTNAME} + ${INSTALL_PROGRAM} -o ${BOINC_USER} -g ${BOINC_GROUP} ${WRKDIR}/${APP} ${BOINC_HOME}/projects/${SIMAP_SITE} +.endfor post-install: @${CAT} ${PKGMESSAGE} diff --git a/biology/boinc-simap/distinfo b/biology/boinc-simap/distinfo index 361c19b52249..02f76957e12b 100644 --- a/biology/boinc-simap/distinfo +++ b/biology/boinc-simap/distinfo @@ -4,3 +4,9 @@ SIZE (simap_5.10_i386-pc-freebsd) = 391012 MD5 (simap_5.10_i686-pc-freebsd) = 64a58aa385a0b4f06522caad715c2938 SHA256 (simap_5.10_i686-pc-freebsd) = 360e29dcc7705e16254f3b33a8e2183c57fa54fb539b0a117a6484852b726e30 SIZE (simap_5.10_i686-pc-freebsd) = 349724 +MD5 (hmmer_5.09_i386-pc-freebsd) = 88e169f4465692a3a124086181c4562d +SHA256 (hmmer_5.09_i386-pc-freebsd) = 2cb02e6eafcae3cd8bea74a71c794e715df30112eab5be7e6473a7507ed60288 +SIZE (hmmer_5.09_i386-pc-freebsd) = 581267 +MD5 (hmmer_5.09_i686-pc-freebsd) = bc8dee0dbedb11d347fbcdd730a29aa2 +SHA256 (hmmer_5.09_i686-pc-freebsd) = 90f048c17d0cd944ead4b57a5c6de4b397df76fd39b5976f933a9004b8bcf91e +SIZE (hmmer_5.09_i686-pc-freebsd) = 617590 diff --git a/biology/boinc-simap/files/app_info.xml.in b/biology/boinc-simap/files/app_info.xml.in index 9e9ce6ee58ce..52679280e47e 100644 --- a/biology/boinc-simap/files/app_info.xml.in +++ b/biology/boinc-simap/files/app_info.xml.in @@ -2,15 +2,30 @@ <app> <name>simap</name> </app> + <app> + <name>hmmer</name> + </app> + <file_info> + <name>%%SIMAP_BINARY%%</name> + <executable/> + </file_info> <file_info> - <name>%%DISTNAME%%</name> + <name>%%HMMER_BINARY%%</name> <executable/> </file_info> <app_version> <app_name>simap</app_name> - <version_num>%%APPVERSION%%</version_num> + <version_num>%%SIMAP_APPVERSION%%</version_num> + <file_ref> + <file_name>%%SIMAP_BINARY%%</file_name> + <main_program/> + </file_ref> + </app_version> + <app_version> + <app_name>hmmer</app_name> + <version_num>%%HMMER_APPVERSION%%</version_num> <file_ref> - <file_name>%%DISTNAME%%</file_name> + <file_name>%%HMMER_BINARY%%</file_name> <main_program/> </file_ref> </app_version> diff --git a/biology/boinc-simap/pkg-plist b/biology/boinc-simap/pkg-plist index b2721fbe82f7..ae390ed92135 100644 --- a/biology/boinc-simap/pkg-plist +++ b/biology/boinc-simap/pkg-plist @@ -1,4 +1,5 @@ @cwd %%BOINC_HOME%% projects/%%SIMAP_SITE%%/app_info.xml projects/%%SIMAP_SITE%%/%%SIMAP_BINARY%% +projects/%%SIMAP_SITE%%/%%HMMER_BINARY%% @unexec rmdir %D/projects/%%SIMAP_SITE%% 2>/dev/null || true |