diff options
Diffstat (limited to 'science/afni/Makefile')
| -rw-r--r-- | science/afni/Makefile | 138 |
1 files changed, 61 insertions, 77 deletions
diff --git a/science/afni/Makefile b/science/afni/Makefile index 6953e9cd25ba..8a918e89ba4e 100644 --- a/science/afni/Makefile +++ b/science/afni/Makefile @@ -16,14 +16,14 @@ # Makefile.BSD, which is included in the source distribution. PORTNAME= afni -PORTVERSION= 2006.06.30.1332 +PORTVERSION= 2007.04.18.1830 CATEGORIES= science biology graphics MASTER_SITES= http://www.neuro.mcw.edu/~bacon/Ports/distfiles/AFNI/${PORTVERSION}/ \ http://afni.nimh.nih.gov/pub/dist/tgz/ -DISTFILES= afni_src.tgz afni_doc.tgz afni.1 \ +DISTFILES= afni_src.tgz afni.1 \ TTatlas+tlrc.BRIK.gz TTatlas+tlrc.HEAD CA_EZ_v1.3c-May0806.tgz DIST_SUBDIR= AFNI-${PORTVERSION} -EXTRACT_ONLY= afni_src.tgz afni_doc.tgz CA_EZ_v1.3c-May0806.tgz +EXTRACT_ONLY= afni_src.tgz CA_EZ_v1.3c-May0806.tgz MAINTAINER= bacon@smithers.neuro.mcw.edu COMMENT= Advanced Functional Neuro Imaging @@ -31,12 +31,13 @@ COMMENT= Advanced Functional Neuro Imaging RUN_DEPENDS= cjpeg:${PORTSDIR}/graphics/jpeg \ mpeg_encode:${PORTSDIR}/multimedia/mpeg_encode \ whirlgif:${PORTSDIR}/graphics/whirlgif \ - ppmtogif:${PORTSDIR}/graphics/netpbm + ppmtogif:${PORTSDIR}/graphics/netpbm \ + endian:${PORTSDIR}/sysutils/endian .include <bsd.port.pre.mk> .if ${ARCH} == "sparc64" -BROKEN= Does not compile on sparc64: "undefined reference to `_mcount'" +BROKEN= Does not compile on sparc64: "undefined reference to '_mcount'" .endif USE_GETTEXT= yes @@ -54,89 +55,72 @@ ALL_TARGET= vastness suma MAN1= afni.1 -# these need not to be stripped -SCRIPTS=\ - @2dwarper \ - @4Daverage \ - @AfniOrient2RAImap \ - @AfniOrientSign \ - @Align_Centers \ - @Center_Distance \ - @CheckForAfniDset \ - @CommandGlobb \ - @DoPerRoi.py \ - @DTI_studio_reposition \ - @FromRAI \ - @GetAfniOrient \ - @GetAfniPrefix \ - @GetAfniView \ - @IsoMasks \ - @NoExt \ - @Purify_1D \ - @RenamePanga \ - @SUMA_AlignToExperiment \ - @SUMA_Make_Spec_Caret \ - @SUMA_Make_Spec_FS \ - @SUMA_Make_Spec_SF \ - @ToRAI \ - @UpdateAfni \ - @VolCenter \ - @align_partial_oblique \ - @auto_align \ - @auto_tlrc \ - @clip_volume \ - @fix_FSsphere \ - @make_stim_file \ - @np \ - @parse_afni_name \ - @parse_name \ - afni_base.py \ - 3dMax \ - suma_change_spec - -PLIST_FILES+= ${SCRIPTS:S|^|bin/|} - INSTALL_WRKSRC= ${WRKSRC}/BSD -INSTALL_TEMP= ${WRKSRC}/Backup.BSD +STAGE= ${WRKSRC}/stage + +X11R6_FILES= coxplot/Makefile \ + coxplot/Makefile.f2c \ + 3DEdge/src/Makefile \ + SUMA/SUMA_Makefile \ + edt_blur.c \ + suma_datasets.c \ + SUMA/SUMA_Load_Surface_Object.c \ + SUMA/SUMA_MiscFunc.c \ + SUMA/SUMA_ParseCommands.c \ + SUMA/SUMA_StripPath.c \ + SUMA/GLUT/libglut/glut_event.c \ + SUMA/SUMA_Surface_IO.c post-extract: - ${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC} - ${CP} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${WRKDIR} - ${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${WRKDIR}/afni.1 - @${REINPLACE_CMD} -e 's|/usr/X11R6|${X11BASE}|g' ${WRKSRC}/Makefile.FreeBSD_PORT + @${CP} -f ${FILESDIR}/Makefile.FreeBSD_PORT ${WRKSRC} +.for f in ${X11R6_FILES} + @${REINPLACE_CMD} -e 's|/usr/X11R6|$${X11BASE}|g' ${WRKSRC}/${f} +.endfor -do-install: - ${MKDIR} ${DATADIR} ${INSTALL_TEMP} \ - ${PREFIX}/lib/afni ${PREFIX}/include/afni - @${MV} ${INSTALL_WRKSRC}/libf2c.a ${INSTALL_TEMP} - ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.so ${INSTALL_WRKSRC}/*.a \ - ${PREFIX}/lib/afni - ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.h \ - ${PREFIX}/include/afni - ${INSTALL_DATA} ${INSTALL_WRKSRC}/*.jpg ${INSTALL_WRKSRC}/*.txt \ - ${DATADIR} - @${MV} ${INSTALL_WRKSRC}/*.so \ - ${INSTALL_WRKSRC}/*.a \ - ${INSTALL_WRKSRC}/*.h \ - ${INSTALL_WRKSRC}/*.jpg \ - ${INSTALL_WRKSRC}/*.txt \ - ${INSTALL_WRKSRC}/cjpeg \ +post-build: + ${MKDIR} ${STAGE}/bin \ + ${STAGE}/scripts \ + ${STAGE}/lib \ + ${STAGE}/include \ + ${STAGE}/trash \ + ${STAGE}/doc \ + ${STAGE}/share + ${MV} ${INSTALL_WRKSRC}/libf2c.a \ + ${INSTALL_WRKSRC}/cjpeg \ ${INSTALL_WRKSRC}/djpeg \ ${INSTALL_WRKSRC}/mpeg_encode \ ${INSTALL_WRKSRC}/whirlgif \ - ${INSTALL_TEMP} -.for f in ${SCRIPTS} - ${INSTALL_SCRIPT} ${INSTALL_WRKSRC}/${f} ${PREFIX}/bin - @${MV} ${INSTALL_WRKSRC}/${f} ${INSTALL_TEMP} -.endfor - ${INSTALL_PROGRAM} ${INSTALL_WRKSRC}/* ${PREFIX}/bin + ${STAGE}/trash + ${MV} ${INSTALL_WRKSRC}/*.a \ + ${INSTALL_WRKSRC}/*.so \ + ${STAGE}/lib + ${MV} ${INSTALL_WRKSRC}/*.jpg \ + ${INSTALL_WRKSRC}/*.txt \ + ${INSTALL_WRKSRC}/AFNI.*rc \ + ${STAGE}/share + ${MV} ${INSTALL_WRKSRC}/*.h \ + ${STAGE}/include + ${MV} ${INSTALL_WRKSRC}/README* \ + ${STAGE}/doc + for binary in `${FILE} ${INSTALL_WRKSRC}/* | fgrep 'ELF' | ${AWK} -F ':' ' { print $$1 }'` ; do \ + ${MV} $${binary} ${STAGE}/bin ; \ + done + ${MV} ${INSTALL_WRKSRC}/* \ + ${STAGE}/scripts + +do-install: + ${MKDIR} ${DATADIR} ${PREFIX}/lib/afni ${PREFIX}/include/afni + ${INSTALL_DATA} ${STAGE}/lib/* ${PREFIX}/lib/afni + ${INSTALL_DATA} ${STAGE}/include/* ${PREFIX}/include/afni + ${INSTALL_DATA} ${STAGE}/share/* ${DATADIR} + ${INSTALL_PROGRAM} ${STAGE}/bin/* ${PREFIX}/bin + ${INSTALL_SCRIPT} ${STAGE}/scripts/* ${PREFIX}/bin ${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/TTatlas* ${DATADIR} ${INSTALL_DATA} ${WRKDIR}/CA_EZ_v1.3c-May0806/* ${DATADIR} - ${INSTALL_MAN} ${WRKDIR}/afni.1 ${PREFIX}/man/man1 - @${MV} ${INSTALL_TEMP}/* ${INSTALL_WRKSRC} + ${INSTALL_MAN} ${DISTDIR}/${DIST_SUBDIR}/afni.1 ${PREFIX}/man/man1 .if !defined(NOPORTDOCS) ${MKDIR} ${DOCSDIR} - ${INSTALL_DATA} ${WRKDIR}/afni_doc/* ${DOCSDIR} + ${INSTALL_DATA} ${STAGE}/doc/* ${DOCSDIR} .endif post-install: |