diff options
Diffstat (limited to 'science/py-DendroPy')
| -rw-r--r-- | science/py-DendroPy/Makefile | 2 | ||||
| -rw-r--r-- | science/py-DendroPy/distinfo | 6 | ||||
| -rw-r--r-- | science/py-DendroPy/files/patch-setup.py | 21 | ||||
| -rw-r--r-- | science/py-DendroPy/pkg-plist | 314 |
4 files changed, 16 insertions, 327 deletions
diff --git a/science/py-DendroPy/Makefile b/science/py-DendroPy/Makefile index 1e135426a9f1..03f6d5428cd1 100644 --- a/science/py-DendroPy/Makefile +++ b/science/py-DendroPy/Makefile @@ -6,7 +6,7 @@ # PORTNAME= DendroPy -PORTVERSION= 3.0.2 +PORTVERSION= 3.0.5 CATEGORIES= science python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} diff --git a/science/py-DendroPy/distinfo b/science/py-DendroPy/distinfo index 18f87fab87eb..0ab1bc517195 100644 --- a/science/py-DendroPy/distinfo +++ b/science/py-DendroPy/distinfo @@ -1,3 +1,3 @@ -MD5 (DendroPy-3.0.2.tar.gz) = d1e44937e5171fe864864f6cb8e629c1 -SHA256 (DendroPy-3.0.2.tar.gz) = 99304b4611f38da96370ca6470847e20a0ff01f78320438a872fdcebdb41f621 -SIZE (DendroPy-3.0.2.tar.gz) = 2233110 +MD5 (DendroPy-3.0.5.tar.gz) = 01d088b5184bdced992499fc0a6fbd12 +SHA256 (DendroPy-3.0.5.tar.gz) = 4688c28e771e448633354da31211f9078fed48701c991baa04b69cc04c39eed1 +SIZE (DendroPy-3.0.5.tar.gz) = 2238712 diff --git a/science/py-DendroPy/files/patch-setup.py b/science/py-DendroPy/files/patch-setup.py index 455b04d52f80..4107230f620b 100644 --- a/science/py-DendroPy/files/patch-setup.py +++ b/science/py-DendroPy/files/patch-setup.py @@ -1,15 +1,16 @@ ---- setup.py.orig 2010-01-09 13:22:53.000000000 +0800 -+++ setup.py 2010-01-09 13:23:15.000000000 +0800 -@@ -28,9 +28,9 @@ - import os +--- setup.py.orig 2010-01-15 12:55:37.000000000 +0800 ++++ setup.py 2010-01-15 12:55:53.000000000 +0800 +@@ -31,13 +31,6 @@ + # setuptools/distutils/etc. import and configuration try: - import ez_setup -- sys.stderr.write("using ez_setup ('%s')\n" % os.path.abspath(ez_setup.__file__)) +- try: +- ez_setup_path = " ('" + os.path.abspath(ez_setup.__file__) + "')" +- except OSError: +- ez_setup_path = "" +- sys.stderr.write("using ez_setup%s\n" % ez_setup_path) - ez_setup.use_setuptools() -+# import ez_setup -+# sys.stderr.write("using ez_setup ('%s')\n" % os.path.abspath(ez_setup.__file__)) -+# ez_setup.use_setuptools() import setuptools - sys.stderr.write("using setuptools ('%s')\n" % os.path.abspath(setuptools.__file__)) - from setuptools import setup, find_packages + try: + setuptools_path = " ('" + os.path.abspath(setuptools.__file__) + "')" diff --git a/science/py-DendroPy/pkg-plist b/science/py-DendroPy/pkg-plist index d36cf1d5b021..db97df2e3274 100644 --- a/science/py-DendroPy/pkg-plist +++ b/science/py-DendroPy/pkg-plist @@ -2,316 +2,4 @@ bin/cattrees.py bin/long_branch_symmdiff.py bin/strict_consensus_merge.py bin/sumtrees.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/PKG-INFO -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/SOURCES.txt -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/dependency_links.txt -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/not-zip-safe -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/requires.txt -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/scripts/cattrees.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/scripts/long_branch_symmdiff.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/scripts/strict_consensus_merge.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/scripts/sumtrees.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/EGG-INFO/top_level.txt -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/__init__.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/__init__.pyc -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/__init__.pyo -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/coalescent.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/coalescent.pyc -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/coalescent.pyo -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/continuous.py -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/continuous.pyc -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/continuous.pyo -%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%%/dendropy/dataio/__init__.py 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