ports - FreeBSD ports tree

	Commit message (Collapse)	Author	Age	Files	Lines
*	Mk/**java.mk: Convert bsd.java.mk to USES	Muhammad Moinur Rahman	2024-12-31	1	-2/+1
\| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \|	The following features have been added or changed: - Instead of USE_JAVA use USES=java. This defaults to USES=java:build,run if NO_BUILD is undefined. Else it defaults to USES=java:run - Instead of USE_ANT=yes use USES=java:ant which also implies USES=java:build - Instead of JAVA_BUILD=yes use USES=java:build. Does not imply run or extract - Instead of JAVA_EXTRACT=yes use USES=java:extract does not imply build or run - Instead of JAVA_RUN=yes use USES=java:run does not imply extract or build - Instead of USE_JAVA=<version> use USES=java and JAVA_VERSION=<version> Approved by: mat (portmgr), glewis Differential Revision: https://reviews.freebsd.org/D48201
*	biology/fastqc: Update to 0.12.1	Jason W. Bacon	2023-03-05	3	-5/+47
\| \| \| \| \| \| \|	Several feature enhancements and a few bug fixes Changes: https://github.com/s-andrews/FastQC/releases Reported by: portscout
*	Remove WWW entries moved into port Makefiles	Stefan Eßer	2022-09-07	1	-2/+0
\| \| \| \| \| \| \| \| \| \|	Commit b7f05445c00f has added WWW entries to port Makefiles based on WWW: lines in pkg-descr files. This commit removes the WWW: lines of moved-over URLs from these pkg-descr files. Approved by: portmgr (tcberner)
*	Add WWW entries to port Makefiles	Stefan Eßer	2022-09-07	1	-0/+1
\| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \| \|	It has been common practice to have one or more URLs at the end of the ports' pkg-descr files, one per line and prefixed with "WWW:". These URLs should point at a project website or other relevant resources. Access to these URLs required processing of the pkg-descr files, and they have often become stale over time. If more than one such URL was present in a pkg-descr file, only the first one was tarnsfered into the port INDEX, but for many ports only the last line did contain the port specific URL to further information. There have been several proposals to make a project URL available as a macro in the ports' Makefiles, over time. This commit implements such a proposal and moves one of the WWW: entries of each pkg-descr file into the respective port's Makefile. A heuristic attempts to identify the most relevant URL in case there is more than one WWW: entry in some pkg-descr file. URLs that are not moved into the Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr files in order to preserve them. There are 1256 ports that had no WWW: entries in pkg-descr files. These ports will not be touched in this commit. The portlint port has been adjusted to expect a WWW entry in each port Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as deprecated. Approved by: portmgr (tcberner)
*	One more small cleanup, forgotten yesterday.	Mathieu Arnold	2021-04-07	1	-1/+0
\| \| \| \|	Reported by: lwhsu
*	Remove # $FreeBSD$ from Makefiles.	Mathieu Arnold	2021-04-06	1	-1/+0
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*	biology/fastqc: Update to 0.11.9	Jason W. Bacon	2021-02-04	2	-4/+4
\| \| \| \| \| \| \|	Minor bug fixes since 0.11.8 Notes: svn path=/head/; revision=564040
*	biology/fastqc: Upgrade to 0.11.8	Jason W. Bacon	2019-09-21	3	-14/+12
\| \| \| \| \| \| \| \| \|	Minor bug fixes and edge case handling. Minor Makefile clean up. Notes: svn path=/head/; revision=512461
*	[new port] biology/fastqc: Quality control tool for high throughput sequence ↵	Jason W. Bacon	2017-11-30	4	-0/+259
	data Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D13304 Notes: svn path=/head/; revision=455236