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* Extend expiration of ports broken with -fno-commonNiclas Zeising2020-08-301-3/+3
| | | | | | | | | | | | | | | | | Extend the expiration of unmaintained leaf ports that are broken with -fno-common and previously had a short expiration date. The new date is set to 2021-04-01, meaning the ports will be in the 2021Q2 branch, giving people until 2021-06-30 (10 months from now) to fix issues. Improve the wording of the deprecation message, mentioning both llvm 11 and -fno-common. Bump portrevision to force reinstall. This way the warning message about deprecation will be displayed to users installing or reinstalling the software. MFH: 2020Q3 (maybe) Notes: svn path=/head/; revision=547044
* biology/: Fix build with clang11 and deprecate ports@ portsTobias C. Berner2020-08-291-0/+5
| | | | Notes: svn path=/head/; revision=546885
* Convert to UCL & cleanup pkg-message (categories a-c)Mathieu Arnold2019-08-131-4/+6
| | | | Notes: svn path=/head/; revision=508834
* - Fix trailing whitespace in pkg-messagesDmitry Marakasov2016-05-191-2/+2
| | | | | | | Approved by: portmgr blanket Notes: svn path=/head/; revision=415503
* Prevent collision with getline(3)Baptiste Daroussin2016-05-114-6/+27
| | | | | | | While here regen patches Notes: svn path=/head/; revision=415036
* Remove deprecated PLIST_DIRSTRY and also no longer needed PLIST_DIRSPawel Pekala2016-01-091-2/+0
| | | | Notes: svn path=/head/; revision=405652
* - Fix shebangsDmitry Marakasov2015-06-111-1/+3
| | | | | | | MFH: 2015Q2 Notes: svn path=/head/; revision=389186
* - Fix buildPhilippe Audeoud2013-11-272-10/+42
| | | | | | | | | | - Support STAGEDIR PR: ports/184238 Submitted by: KATO Tsuguru <tkato432@yahoo.com> Notes: svn path=/head/; revision=335011
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵Baptiste Daroussin2013-09-201-0/+1
| | | | | | | biology) Notes: svn path=/head/; revision=327709
* - Convert to new perl frameworkMathieu Arnold2013-08-031-1/+2
| | | | | | | - Remove MAKE_JOBS_SAFE=yes, it's the default. Notes: svn path=/head/; revision=324191
* - Update to version 2.0Wen Heping2012-11-156-80/+60
| | | | | | | | | | | | - Update pkg-descr PR: 172497 Submitted by: KATO Tsuguru <tkato432@yahoo.com> Feature safe: yes Notes: svn path=/head/; revision=307436
* - Reassign to the heap at maintainer's requestThomas Abthorpe2012-10-011-6/+2
| | | | Notes: svn path=/head/; revision=305130
* - Get Rid MD5 supportMartin Wilke2011-03-191-1/+0
| | | | Notes: svn path=/head/; revision=271305
* - Unbreak build: CPP is now part of MAKE_ENVPav Lucistnik2010-11-081-1/+1
| | | | | | | Reported by: pointyhat Notes: svn path=/head/; revision=264247
* - Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default ↵Pav Lucistnik2008-07-251-1/+2
| | | | | | | MAKE_ENV Notes: svn path=/head/; revision=217468
* Add lagan 1.2, efficient tools for large-scale multiple alignments ofRenato Botelho2006-03-165-0/+135
genomic DNA. PR: ports/93058 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> Notes: svn path=/head/; revision=157464
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