| Commit message (Collapse) | Author | Age | Files | Lines |
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in the ports tree (via Mk/bsd.default-versions.mk and lang/gcc) which
has now moved from GCC 6 to GCC 7 by default.
This includes ports
- featuring USE_GCC=yes or USE_GCC=any,
- featuring USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and those
- with USES=compiler specifying one of openmp, nestedfct, c11, c++0x,
c++11-lib, c++11-lang, c++14-lang, c++17-lang, or gcc-c++11-lib.
PR: 222542
Notes:
svn path=/head/; revision=475857
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The upstream keeps changing the URL.
Notes:
svn path=/head/; revision=475001
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Reported by: pkg-fallout
Notes:
svn path=/head/; revision=474994
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Notes:
svn path=/head/; revision=474570
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Reported by: pkg-fallout
MFH: 2018Q3
Notes:
svn path=/head/; revision=474562
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Reviewed by: zeising (mentor)
Approved by: zeising (mentor)
Differential Revision: https://reviews.freebsd.org/D15333
Notes:
svn path=/head/; revision=470488
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Reported by: pkg-fallout
MFH: 2018Q2
Notes:
svn path=/head/; revision=469265
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version 1.1.0 (via revision 464079).
Notes:
svn path=/head/; revision=464084
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Reviewed by: swills (mentor), mat
Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D12829
Notes:
svn path=/head/; revision=453261
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Reviewed by: swills (mentor)
Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D12521
Notes:
svn path=/head/; revision=450799
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(via Mk/bsd.default-versions.mk and lang/gcc) which has moved from
GCC 5.4 to GCC 6.4 under most circumstances.
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using Mk/bsd.octave.mk which in turn features USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++11-lang,
c++14-lang, c++0x, c11, or gcc-c++11-lib.
PR: 219275
Notes:
svn path=/head/; revision=449591
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to host a distfile copy.
Reviewed by: swills (mentor)
Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D11586
Notes:
svn path=/head/; revision=445717
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distribution.
Reviewed by: swills (mentor)
Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D11338
Notes:
svn path=/head/; revision=445570
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=> Attempting to fetch ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.7.tar.gz
fetch: ftp://ftp.cmbi.ru.nl/pub/molgraph/molden/molden5.7.tar.gz: size mismatch: expected 5339411, actual 5339467
=> Couldn't fetch it - please try to retrieve this
Sponsored by: Absolight
Notes:
svn path=/head/; revision=444104
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Reported by: xmj
Notes:
svn path=/head/; revision=442480
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Reviewed by: swills (mentor)
Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D10864
Notes:
svn path=/head/; revision=441560
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Approved by: swills (mentor)
Differential Revision: https://reviews.freebsd.org/D10845
Notes:
svn path=/head/; revision=441503
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Reported by: pkg-fallout
Notes:
svn path=/head/; revision=441258
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lang/gcc which have moved from GCC 4.9.4 to GCC 5.4 (at least under some
circumstances such as versions of FreeBSD or platforms).
This includes ports
- with USE_GCC=yes or USE_GCC=any,
- with USES=fortran,
- using using Mk/bsd.octave.mk which in turn has USES=fortran, and
- with USES=compiler specifying openmp, nestedfct, c++11-lib, c++14-lang,
c++11-lang, c++0x, c11, or gcc-c++11-lib.
PR: 216707
Notes:
svn path=/head/; revision=437439
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Reviewed by: swills (mentor), pi (former maintainer)
Approved by: swills (mentor), pi (former maintainer)
Differential Revision: https://reviews.freebsd.org/D9501
Notes:
svn path=/head/; revision=433832
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Approved by: portmgr blanket
Notes:
svn path=/head/; revision=433554
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lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some
circumstances such as versions of FreeBSD or platforms), part II.
The first part covered ports with USE_GCC=yes, USE_GCC=any, or one of
gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang,
c++11-lang, c++0x, c11 requested via USES=compiler.
This adds ports with USES=fortran and ports using Mk/bsd.octave.mk
which in turn has USES=fortran.
PR: 214965
Reported by: thierry
Notes:
svn path=/head/; revision=428057
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Notes:
svn path=/head/; revision=427627
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Reported by: pkg-fallout
Notes:
svn path=/head/; revision=425830
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Submitted by: marino
Reported by: Eduardo Lemos de Sa <eduardo.lemosdesa@gmail.com>
MFH: 2016Q4
Notes:
svn path=/head/; revision=425806
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Reported by: pkg-fallout
Notes:
svn path=/head/; revision=423039
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- Adds editable text fields that are longer than the visible string
and introduces a new way of selecting a range of amino acids.
- introduces interfaces to the open source packages openbabel and pharmer.
Openbabel is used to create 2D images of the molecules in a .sdf
file. It is also used to do 2D fingerprint searching.
Pharmer is used to pharmacophore (3D) searching against indexed
databases of .sdf files.
Notes:
svn path=/head/; revision=420890
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Approved by: portmgr blanket
Notes:
svn path=/head/; revision=420601
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Approved by: portmgr blanket
Notes:
svn path=/head/; revision=415498
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- upstream distfile is moving target with same version number
Submitted by: antoine
Notes:
svn path=/head/; revision=406795
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Reported by: pkg-fallout
Notes:
svn path=/head/; revision=406791
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Changes:
- Missing hydrogens atoms of HETATM molecules (pdb files) are stored locally.
- Pdb files can now be clipped.
- Fixes missing residues. Introduces an alternative way of generating rotamers,
without using z-matrices. This potentially a faster algorithm.
- Supports Movie making through avconv/ffmpeg.
- calculates the Electron Localization Function (ELF).
- Updated code of ambfor/ambmd to speed up optimisations/MD of proteins
solvated in water (Jan, 2014).
PR: 204341
Notes:
svn path=/head/; revision=406605
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to GCC 4.8.3.
Part II, Bump PORTREVISIONs.
PR: 192025
Tested by: antoine (-exp runs)
Approved by: portmgr (implicit)
Notes:
svn path=/head/; revision=367888
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Submitted by: ak
With hat: portmgr
Notes:
svn path=/head/; revision=352993
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GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.
Part II, Bump PORTREVISIONs.
PR: 182136
Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by: bdrewery (two -exp runs)
Notes:
svn path=/head/; revision=347809
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PR: 185942
Submitted by: ports fury
Notes:
svn path=/head/; revision=346271
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- Add dependency on xproto.
- Fix build with new CFLAGS.
- Staging.
- New WWW.
Notes:
svn path=/head/; revision=337992
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- Switched to automake 1.11.6, see CVE-2012-3386.
- #14669: Fixed extraction of CC from gmp.h.
- Fixed case of intermediate zero real or imaginary part in mpc_fma,
found by hydra with GMP_CHECK_RANDOMIZE=1346362345.
This is on top of the following changes from version 1.0
- Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
invariant sections) for the documentation.
- 100% of all lines are covered by tests
- Renamed functions
. mpc_mul_2exp to mpc_mul_2ui
. mpc_div_2exp to mpc_div_2ui
- 0^0, which returned (NaN,NaN) previously, now returns (1,+0).
- Removed compatibility with K&R compilers, which was untestable due
to lack of such compilers.
- New functions
. mpc_log10
. mpc_mul_2si, mpc_div_2si
- Speed-ups
. mpc_fma
- Bug fixes
. mpc_div and mpc_norm now return a value indicating the effective
rounding direction, as the other functions.
. mpc_mul, mpc_sqr and mpc_norm now return correct results even if
there are over- or underflows during the computation.
. mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has
infinite part and equals output variable is corrected.
. mpc_fr_sub: Wrong return value for imaginary part is corrected.
Convert to the new LIB_DEPENDS standard and remove hard-coded
.so versions from a couple of dependent ports.
Bump PORTREVISIONS of all dependent ports.
PR: 183141
Approved by: portmgr (bdrewery)
Notes:
svn path=/head/; revision=331644
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biology)
Notes:
svn path=/head/; revision=327709
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PR: 178032
Submitted by: Ports Fury
Notes:
svn path=/head/; revision=316578
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Notes:
svn path=/head/; revision=308917
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- Add MAKE_JOBS_UNSAFE
- Convert to optionsng
PR: ports/171970
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by: beat (mentor)
Feature safe: yes
Notes:
svn path=/head/; revision=308042
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Notes:
svn path=/head/; revision=304749
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- Mute MKDIRs, remove trailing dot from RESTRICTED, drop leading indefinite
article from COMMENT where appropriate
Notes:
svn path=/head/; revision=304748
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Notes:
svn path=/head/; revision=304686
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developed in years and has been dropped from the MESA 8.0 distribution.
Freeglut is a rewrite of glut and is actively developed and is used by
many linux distributions instead of libglut.
Bump all ports that directly depend on libglut because of the shlib version
change.
There are some extra items in this patch.
*) Because freeglut doesn't have the same dependancies as libglut, some ports
need extra dependencies added to USE_XORG to make them build.
*) Mark graphics/f90gl broken, f90gl depends on a header that is only shipped
with libglut.
*) Remove option for libglut/freeglut selection in games/cake, only freeglut
remains now.
*) While here fix a png related build issue games/vegastrike.
Thanks to miwi for running the exp-run.
Approved by: portmgr (miwi)
Collaboration with: zeising@
Obtained from: xorg-dev staging area.
Notes:
svn path=/head/; revision=302037
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had both lines:
Author: ...
WWW: ....
So standardize on that, and move them to the end of the file when necessary.
Also fix some more whitespace, and remove more "signature tags" of varying
forms, like -- name, etc.
s/AUTHOR/Author/
A few other various formatting issues
Notes:
svn path=/head/; revision=284239
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Notes:
svn path=/head/; revision=271305
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implies lang/gcc44 up from lang/gcc43.
Approved by: portmgr
Notes:
svn path=/head/; revision=241308
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Submitted by: maintainer
Notes:
svn path=/head/; revision=238784
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