aboutsummaryrefslogtreecommitdiff
path: root/biology/ncbi-toolkit
Commit message (Collapse)AuthorAgeFilesLines
* Fix build with open-motif-2.3.3Max Brazhnikov2011-05-023-7/+72
| | | | | | | | | PR: ports/154044 Submitted by: Mikhail Tsatsenko <m.tsatsenko at gmail.com> Exp-runs by: pav Notes: svn path=/head/; revision=273474
* - Get Rid MD5 supportMartin Wilke2011-03-191-1/+0
| | | | Notes: svn path=/head/; revision=271305
* - use $SUB_FILES to dynamically adjust pkg-messagePhilip M. Gollucci2010-01-311-2/+1
| | | | | | | | | PR: ports/142408 Submitted by: Sevan Janiyan <venture37@geeklan.co.uk> Approved by: fernan@iib.unsam.edu.ar (maintainer) Notes: svn path=/head/; revision=248917
* - Update to 2009.03.01Martin Wilke2009-03-283-30/+93
| | | | | | | | | PR: 133099 Submitted by: Fernan Aguero <fernan.aguero@gmail.com> Approved by: maintainer Notes: svn path=/head/; revision=231202
* - Remove unneeded dependency from gtk12/gtk20 [1]Martin Wilke2008-04-191-1/+1
| | | | | | | | | | | | | | | | | | - Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG - Remove X11BASE support in favor of LOCALBASE or PREFIX - Use USE_LDCONFIG instead of INSTALLS_SHLIB - Remove unneeded USE_GCC 3.4+ Thanks to all Helpers: Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr, ehaupt, nox, itetcu, flz, pav PR: 116263 Tested on: pointyhat Approved by: portmgr (pav) Notes: svn path=/head/; revision=211584
* - Welcome X.org 7.2 \o/.Florent Thoumie2007-05-191-0/+1
| | | | | | | | - Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}. - Bump PORTREVISION for ports intalling files in ${X11BASE}. Notes: svn path=/head/; revision=191544
* - Respect X11BASERong-En Fan2006-12-091-0/+5
| | | | | | | Approved by: portmgr (linimon) Notes: svn path=/head/; revision=179256
* Update biology/ncbi-toolkit to the latest release.Ion-Mihai Tetcu2006-06-063-5/+11
| | | | | | | | | | | | | | | Quoting from www.ncbi.nlm.nih.gov/blast/blast_whatsnew.shtml Major changes include: blastall now uses the new engine by default, resulting in significant performance improvements and enabling query concatenation for all program types. PR: ports/98570 Submitted by: maintainer Approved by: lawrance (mentor, implict) Notes: svn path=/head/; revision=164601
* Replace ugly "@unexec rmdir %D... 2>/dev/null || true" with @dirrmtryEdwin Groothuis2006-01-221-1/+1
| | | | | | | | Approved by: krion@ PR: ports/88711 (related) Notes: svn path=/head/; revision=154109
* - Update to 2005.12.06Pav Lucistnik2006-01-144-44/+60
| | | | | | | | PR: ports/91714 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=153494
* - Update to 20050605Sergey Matveychuk2005-10-115-20/+36
| | | | | | | | PR: ports/87266 Submitted by: maintainer Notes: svn path=/head/; revision=145033
* Don't strip static libraries on installation ;)Volker Stolz2005-09-141-1/+2
| | | | | | | (Unbreaks e.g. biology/nclever) Notes: svn path=/head/; revision=142695
* - Fix man page damage I did last nightPav Lucistnik2005-03-201-7/+9
| | | | | | | Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) Notes: svn path=/head/; revision=131713
* - Update to 2.2.10 from 20041020Pav Lucistnik2005-03-196-196/+161
| | | | | | | | | | | | - Transfer maintainership PR: ports/67735 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer) Approved by: old maintainer indirectly in http://lists.freebsd.org/pipermail/freebsd-ports-bugs/2004-June/035351.html Notes: svn path=/head/; revision=131662
* - Update to 2004.06.16Pav Lucistnik2004-11-014-167/+276
| | | | | | | | Inspired by: ports/72726 Approved by: maintainer timeout (2 weeks) Notes: svn path=/head/; revision=120614
* Use the FIND and XARGS macros introduced in bsd.port.mk 1.391.Trevor Johnson2003-11-131-1/+1
| | | | Notes: svn path=/head/; revision=93890
* Cosmetic fix: use %%DOCSDIR%% macro.Sergey A. Osokin2003-10-221-51/+51
| | | | | | | | | | No functionally changes. Submitted by: Oleg Karachevtsev <ok@etrust.ru> A part of PR: 57992 Notes: svn path=/head/; revision=91882
* Update to 2003.04.21Tilman Keskinoz2003-05-058-79/+59
| | | | | | | | PR: 51709 Submitted by: Tony Maher <tonymaher@optushome.com.au> Notes: svn path=/head/; revision=80172
* De-pkg-comment.Akinori MUSHA2003-02-212-1/+1
| | | | Notes: svn path=/head/; revision=76030
* add forgotten "USE_REINPLACE=yes"Ying-Chieh Liao2002-09-211-0/+1
| | | | | | | Submitted by: maintainer Notes: svn path=/head/; revision=67009
* upgrade to 20020426Ying-Chieh Liao2002-09-216-22/+16
| | | | | | | | PR: 39357 Submitted by: maintainer Notes: svn path=/head/; revision=66997
* Correct MASTER_SITES.Pete Fritchman2002-06-081-1/+1
| | | | | | | | PR: 39016 Submitted by: maintainer Notes: svn path=/head/; revision=60819
* Update to 2001.12.20Patrick Li2002-02-226-18/+88
| | | | | | | | PR: 35203 Submitted by: maintainer Notes: svn path=/head/; revision=55075
* - Add installation of include filesJohann Visagie2001-09-194-134/+445
| | | | | | | | | | - Bump PORTREVISION PR: 30660 Submitted by: Tony Maher <tonym@biolateral.com.au> (MAINTAINER) Notes: svn path=/head/; revision=47987
* Update maintainer's email address.Johann Visagie2001-08-061-1/+1
| | | | | | | Approved by: MAINTAINER Notes: svn path=/head/; revision=45865
* Update Tony Maher's email address.Bill Fenner2001-07-101-1/+1
| | | | Notes: svn path=/head/; revision=45012
* Update to version 2001.04.03; add installation of some documentation.Johann Visagie2001-06-205-30/+86
| | | | | | | Approved by: MAINTAINER Notes: svn path=/head/; revision=44254
* Remove trailing period and package name from the pkg-comment.Dmitry Sivachenko2000-12-181-1/+1
| | | | Notes: svn path=/head/; revision=36071
* They made changes to the "blast" program.James E. Housley2000-11-152-2/+3
| | | | | | | Submitted by: MAINTAINER Notes: svn path=/head/; revision=35154
* Change motif to a normal dependency. REQUIRES_MOTIF is now calledSatoshi Asami2000-11-071-1/+1
| | | | | | | | | | | | | | | | | USE_MOTIF and generates a LIB_DEPENDS to x11-toolkits/open-motif. As before, it implies USE_XPM (and therefore USE_XLIB). Motif-dummy is removed from PKG_IGNORE_DEPENDS, whose sole resident is now XFree86-3. Most of the simple ".if defined(HAVE_MOTIF)"s are removed to always have USE_MOTIF. ftp/moxftp will define USE_MOTIF unless WANT_ATHENA_VERSION (new variable) is defined. I merged the X cases in cad/mars, so USE_MOTIF is used iff WITHOUT_X11 is not defined. I will remove x11-toolkits/Motif-dummy (which has been repo copied to open-motif) in a few days. Notes: svn path=/head/; revision=34892
* Yes. They did re-roll this version, it is legit.James E. Housley2000-11-032-2/+2
| | | | | | | | | | | They donot version the dist, but store them in versioned dir. Update Makefile to handle that. Update CHECKSUM Submitted by: bento Notes: svn path=/head/; revision=34732
* Updated to new version. That is the pits, the day after it becomesJames E. Housley2000-11-024-4/+3
| | | | | | | | | | a port they release a new version. This is a new version, w/o a number. PR: 22522 Submitted by: Tony Maher <tonym@dt.home> MAINTAINER Notes: svn path=/head/; revision=34626
* New Port: biology/ncbi-toolkitJames E. Housley2000-10-2910-0/+375
National Center for Biotechnology Information (NCBI) Development Toolkit. PR: 22388 Submitted by: Tony Maher <tony.maher@ebioinformatics.com> Notes: svn path=/head/; revision=34402