aboutsummaryrefslogtreecommitdiff
path: root/biology/p5-Bio-Das
Commit message (Collapse)AuthorAgeFilesLines
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
|
* Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, exceptDag-Erling Smørgrav2018-10-061-2/+2
| | | | | | | | | | for where it resulted in a change in output from build-depends-list or run-depends-list. Approved by: portmgr (adamw) Notes: svn path=/head/; revision=481365
* Update WWWSunpoet Po-Chuan Hsieh2018-05-271-1/+1
| | | | | | | | | | search.cpan.org is shutting down. It will redirect to metacpan.org after June 25, 2018. With hat: perl Notes: svn path=/head/; revision=470993
* Fix license information for portgs that use "the same license as Perl".Mathieu Arnold2017-09-151-1/+1
| | | | | | | Sponsored by: Absolight Notes: svn path=/head/; revision=449893
* - Add LICENSESunpoet Po-Chuan Hsieh2016-12-181-4/+8
| | | | | | | | | - Add NO_ARCH - Sort *_DEPENDS - Bump PORTREVISION for biology/p5-bioperl renaming Notes: svn path=/head/; revision=428870
* Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.Mathieu Arnold2016-04-011-3/+3
| | | | | | | | With hat: portmgr Sponsored by: Absolight Notes: svn path=/head/; revision=412344
* Change the way Perl modules are installed, update the default Perl to 5.18.Mathieu Arnold2014-11-262-2/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Before, we had: site_perl : lib/perl5/site_perl/5.18 site_perl/perl_arch : lib/perl5/site_perl/5.18/mach perl_man3 : lib/perl5/5.18/man/man3 Now we have: site_perl : lib/perl5/site_perl site_arch : lib/perl5/site_perl/mach/5.18 perl_man3 : lib/perl5/site_perl/man/man3 Modules without any .so will be installed at the same place regardless of the Perl version, minimizing the upgrade when the major Perl version is changed. It uses a version dependent directory for modules with compiled bits. As PERL_ARCH is no longer needed in plists, it has been removed from PLIST_SUB. The USE_PERL5=fixpacklist keyword is removed, the .packlist file is now always removed, as is perllocal.pod. The old site_perl and site_perl/arch directories have been kept in the default Perl @INC for all Perl ports, and will be phased out as these old Perl versions expire. PR: 194969 Differential Revision: https://reviews.freebsd.org/D1019 Exp-run by: antoine Reviewed by: perl@ Approved by: portmgr Notes: svn path=/head/; revision=373448
* Cleanup plistBaptiste Daroussin2014-10-201-7/+0
| | | | Notes: svn path=/head/; revision=371237
* - support stageAndrej Zverev2014-01-052-13/+25
| | | | Notes: svn path=/head/; revision=338751
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵Baptiste Daroussin2013-09-201-0/+1
| | | | | | | biology) Notes: svn path=/head/; revision=327709
* - Convert to new perl frameworkMathieu Arnold2013-08-021-6/+3
| | | | | | | | - Trim Makefile header - Remove MAKE_JOBS_SAFE=yes, it's the default. Notes: svn path=/head/; revision=324174
* Cleanup supporting perl version 5.8 and 5.10,Andrej Zverev2012-12-171-7/+1
| | | | | | | lang/perl5.8 and lang/5.10 will be removed from ports tree soon. Notes: svn path=/head/; revision=309105
* - Convert all remaining instances of BUILD_DEPENDS=${RUN_DEPENDS} orSteve Wills2012-06-101-1/+1
| | | | | | | | | | | RUN_DEPENDS=${BUILD_DEPENDS} to use := which portlint has warned about for a while. PR: ports/168208 Approved by: portmgr (miwi) Notes: svn path=/head/; revision=298970
* - update png to 1.5.10Dirk Meyer2012-06-011-1/+1
| | | | Notes: svn path=/head/; revision=297915
* - Revert ports/165605 as requested by portmgr@Philip M. Gollucci2012-03-131-1/+7
| | | | | | | | | | | | Note: devel/p5-B-Size and devel/p5-Devel-Arena where intentionally not restored. PR: ports/165605 Approved by: portmgr (bapt) Feature safe: yes (I sure hope so) Notes: svn path=/head/; revision=293247
* - Remove ports that only work with < perl 5.12 (devel/p5-B-Size, ↵Philip M. Gollucci2012-03-081-7/+1
| | | | | | | | | | | | | | | | | | devel/p5-Devel-Arena) - Remove conditionals for PERL_LEVEL < 501200 - Remove regression-test targets b/c this will be centralized in Mk/bsd.perl.mk - Other minor cleanups RUN_DEPENDS = ${BUILD_DEPENDS} -> RUN_DEPENDS:= ${BUILD_DEPENDS} PR: ports/165605 Submitted by: pgollucci (myself) Approved by: portmgr (linimon) Exp Run by: linimon Tested by: make index Notes: svn path=/head/; revision=292977
* - remove maintainer tags from pkg-descrEitan Adler2011-10-221-2/+0
| | | | | | | | Approved by: portmgr Approved by: bapt (mentor) Notes: svn path=/head/; revision=284139
* - Get Rid MD5 supportMartin Wilke2011-03-191-1/+0
| | | | Notes: svn path=/head/; revision=271305
* Change dependency on old p5-Compress-Zlib, p5-IO-Compress-Base,Martin Matuska2010-09-211-1/+2
| | | | | | | | | p5-IO-Compress-Zlib and p5-IO-Compress-Bzip2 modules to p5-IO-Compress. Explicitly depend on p5-IO-Compress only if PERL_LEVEL < 500903 Bump PORTREVISION Notes: svn path=/head/; revision=261530
* - Update to 1.17Wen Heping2010-06-302-4/+4
| | | | | | | Feature safe: yes Notes: svn path=/head/; revision=257190
* - Update to 1.16Wen Heping2010-06-242-4/+4
| | | | | | | Feature safe: yes Notes: svn path=/head/; revision=256892
* - Update to 1.15Wen Heping2010-06-122-5/+4
| | | | Notes: svn path=/head/; revision=256433
* - update to 1.4.1Dirk Meyer2010-03-281-1/+1
| | | | | | | | Reviewed by: exp8 run on pointyhat Supported by: miwi Notes: svn path=/head/; revision=251605
* - update to jpeg-8Dirk Meyer2010-02-051-0/+1
| | | | Notes: svn path=/head/; revision=249285
* - Update to 1.14Philippe Audeoud2009-09-082-4/+4
| | | | Notes: svn path=/head/; revision=241036
* - Update to 1.12Martin Wilke2009-08-272-5/+4
| | | | | | | | PR: 138230 Submitted by: Wen Heping <wenheping@gmail.com> Notes: svn path=/head/; revision=240427
* - bump all port that indirectly depends on libjpeg and have not yet been ↵Dirk Meyer2009-07-311-0/+1
| | | | | | | | | bumped or updated Requested by: edwin Notes: svn path=/head/; revision=238701
* - lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checksPhilip M. Gollucci2009-07-221-4/+0
| | | | | | | | | PR: ports/135398 Tested by: 2 -exp runs by pav Approved by: portmgr (pav) Notes: svn path=/head/; revision=238202
* - Update to 1.11Philippe Audeoud2009-06-082-4/+4
| | | | Notes: svn path=/head/; revision=235423
* - update to 1.10Yen-Ming Lee2008-12-113-14/+21
| | | | Notes: svn path=/head/; revision=224091
* - Update to 1.09Martin Wilke2008-05-312-4/+4
| | | | Notes: svn path=/head/; revision=214021
* Update to 1.08Mathieu Arnold2008-05-232-4/+4
| | | | Notes: svn path=/head/; revision=213548
* - Include some ports in perl5 category.Marcelo Araujo2008-05-191-1/+1
| | | | | | | | | | PR: ports/123530 Submitted by: Philip M. Gollucci <pgollucci@p6m7g8.com> Reworked by: araujo (myself) Approved by: flz (portmgr) Notes: svn path=/head/; revision=213332
* - Take advantage of CPAN macro from bsd.sites.mk, change ↵Marcelo Araujo2008-04-171-2/+1
| | | | | | | | | | | | ${MASTER_SITE_PERL_CPAN} to CPAN. PR: ports/122674 Submitted by: Philip M. Gollucci <pgollucci@p6m7g8.com> Reworked by: araujo (myself) Approved by: portmgr (pav) Notes: svn path=/head/; revision=211450
* - Update to 1.07Martin Wilke2008-03-122-4/+4
| | | | Notes: svn path=/head/; revision=208888
* - Update to 1.06Martin Wilke2007-09-072-12/+5
| | | | | | | - Remove 4.X cruft Notes: svn path=/head/; revision=199031
* - Welcome X.org 7.2 \o/.Florent Thoumie2007-05-191-0/+1
| | | | | | | | - Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}. - Bump PORTREVISION for ports intalling files in ${X11BASE}. Notes: svn path=/head/; revision=191544
* Reset razi@genet.sickkids.on.ca due to maintainer-timeouts and no response toMark Linimon2007-03-141-1/+1
| | | | | | | | | email. Hat: portmgr Notes: svn path=/head/; revision=187365
* - Update to 1.03Rong-En Fan2006-12-193-105/+42
| | | | | | | | | PR: ports/106300 Submitted by: chinsan Approved by: maintainer timeout (15 days) Notes: svn path=/head/; revision=180115
* Correct path to Compress::Zlib.pm after recent p5-Compress-Zlib update.Dmitry Sivachenko2006-12-031-1/+1
| | | | Notes: svn path=/head/; revision=178677
* SHA256ifyEdwin Groothuis2006-01-221-0/+1
| | | | | | | Approved by: krion@ Notes: svn path=/head/; revision=154141
* - Remove symlinks that belong to mtreePav Lucistnik2006-01-051-2/+0
| | | | | | | Approved by: maintainers Notes: svn path=/head/; revision=152842
* Add the right MASTER_SITE_SUBDIR, so that this port is fetchable fromBill Fenner2005-11-261-0/+1
| | | | | | | 20 sites instead of just 1. Notes: svn path=/head/; revision=149534
* Add p5-Bio-Das 1.02, client-side library for Distributed GenomeRenato Botelho2005-09-014-0/+157
Annotation System. PR: ports/76379 Submitted by: Razi Khaja <razi@genet.sickkids.on.ca> Notes: svn path=/head/; revision=141702