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* Add OPTIONS_DEFINE=DOCS for ports with %%PORTDOCS%% in the plist.Adam Weinberger2014-07-151-0/+2
| | | | | | | | | | Where possible, correct a few instances where PORTDOCS was being used to flag stuff in EXAMPLESDIR. For some ports, mostly those owned by ruby@, PORTDOCS is applied to pretty much everything whether it's documentation or example. Notes: svn path=/head/; revision=362014
* biology/seqtools: 4.26 -> 4.27Kurt Jaeger2014-07-122-4/+3
| | | | Notes: svn path=/head/; revision=361635
* - Chase database/sqlite3 slib bumpMartin Wilke2014-06-271-0/+1
| | | | | | | Approved by: portmgr (myself) Notes: svn path=/head/; revision=359586
* Remove all space characters from Makefile assignments.Jimmy Olgeni2014-06-081-1/+1
| | | | | | | | | | No functional changes included. CR: D193 (except math/sedumi) Approved by: portmgr (bapt) Notes: svn path=/head/; revision=357070
* biology/seqtools: 4.25 -> 4.26, fix broken distinfo by upgradingKurt Jaeger2014-05-022-4/+5
| | | | | | | | Submitted by: pi (myself) Approved by: jadawin (mentor) Notes: svn path=/head/; revision=352838
* biology/seqtools: 4.24 -> 4.25Kurt Jaeger2014-05-012-5/+4
| | | | | | | | | PR: ports/186299 Submitted by: pi (myself) Approved by: jadawin (mentor) Notes: svn path=/head/; revision=352761
* Fix old makeplist bug.Mathieu Arnold2014-02-122-1/+2
| | | | | | | | Pointy hat to: people who blindly use makeplist Sponsored by: Absolight Notes: svn path=/head/; revision=343923
* biology/seqtools: update to 4.24William Grzybowski2013-12-242-3/+3
| | | | | | | | PR: ports/185162 Submitted by: maintainer Notes: svn path=/head/; revision=337375
* biology/seqtools: update to 4.23William Grzybowski2013-11-142-4/+4
| | | | | | | | PR: ports/183960 Submitted by: maintainer Notes: svn path=/head/; revision=333786
* biology/seqtools: Tools for visualising sequence alignmentsWilliam Grzybowski2013-11-104-0/+60
Blixem is an interactive browser of pairwise alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment. Belvu is a multiple sequence alignment viewer and phylogenetic tool. Dotter is a graphical dot-matrix program for detailed comparison of two sequences. WWW: http://www.sanger.ac.uk/resources/software/seqtools/ PR: ports/183801 Submitted by: Kurt Jaeger <fbsd-ports opsec.eu> Notes: svn path=/head/; revision=333374