| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | One more small cleanup, forgotten yesterday. | Mathieu Arnold | 2021-04-07 | 1 | -1/+0 |
| | | | | | Reported by: lwhsu | ||||
| * | Remove # $FreeBSD$ from Makefiles. | Mathieu Arnold | 2021-04-06 | 1 | -1/+0 |
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| * | biology/subread: Update to 2.0.2 | Jason W. Bacon | 2021-03-30 | 4 | -19/+20 |
| | | | | | | | | | | Minor bug fixes and enhancements Reported by: portscout Notes: svn path=/head/; revision=569561 | ||||
| * | biology/subread: Add -fcommon for clang 11 | Jason W. Bacon | 2020-09-18 | 1 | -0/+1 |
| | | | | | | | | Reported by: pkg-fallout Notes: svn path=/head/; revision=548871 | ||||
| * | biology/subread: Read alignment, quantification and mutation discovery | Jason W. Bacon | 2020-06-05 | 17 | -0/+366 |
| The Subread package comprises a suite of software programs for processing next-gen sequencing read data including: Subread: a general-purpose read aligner Subjunc: a read aligner developed for aligning RNA-seq reads featureCounts: a software program developed for counting reads to genomic features such as genes, exons, promoters and genomic bins. Sublong: a long-read aligner that is designed based on seed-and-vote. exactSNP: discovers SNPs by testing signals against local background noise. Notes: svn path=/head/; revision=537982 | |||||
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