| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | One more small cleanup, forgotten yesterday. | Mathieu Arnold | 2021-04-07 | 1 | -1/+0 |
| | | | | | Reported by: lwhsu | ||||
| * | Remove # $FreeBSD$ from Makefiles. | Mathieu Arnold | 2021-04-06 | 1 | -1/+0 |
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| * | biology/vcf-split: Split a multi-sample VCF into single-sample VCFs | Jason W. Bacon | 2021-03-21 | 3 | -0/+34 |
| Vcf-split splits a multi-sample VCF into single-sample VCFs, writing thousands of output files simultaneously. Parsing the TOPMed human chromosome 1 BCF with bcftools takes two days, so extracting the 137,977 samples one at a time or using thousands of parallel readers of the same file is impractical. Vcf-split solves this by generating thousands of single-sample outputs during a single sweep through the multi-sample input. Notes: svn path=/head/; revision=568922 | |||||
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