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* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
| | | | Reported by: lwhsu
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-1/+0
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* biology/vsearch: Update to 2.16.0Jason W. Bacon2021-03-242-4/+4
| | | | | | | | | | Add "orient" subcommand A few other fixes and enhancements Reported by: portscout Notes: svn path=/head/; revision=569151
* biology/vsearch: Update to 2.15.2Jason W. Bacon2021-01-303-10/+11
| | | | | | | | | Code clean up and modernization Reported by: portscout Notes: svn path=/head/; revision=563418
* biology/vsearch: enable on powerpc64lePiotr Kubaj2021-01-161-1/+1
| | | | Notes: svn path=/head/; revision=561748
* biology/vsearch: Update to 2.15.0Jason W. Bacon2020-06-202-4/+4
| | | | | | | Numerous minor enhancements Notes: svn path=/head/; revision=539742
* biology/vsearch: Upgrade to 2.14.2Jason W. Bacon2020-02-192-5/+5
| | | | | | | | | Numerous small bug fixes and enhancements Reported by: portscout Notes: svn path=/head/; revision=526534
* biology/vsearch: Update to 2.13.4Jason W. Bacon2019-05-114-91/+4
| | | | | | | | | FreeBSD patches incorporated into new upstream release Reported by: portscout Notes: svn path=/head/; revision=501259
* biology/vsearch: Remove powerpc64 supportJason W. Bacon2019-05-091-1/+1
| | | | | | | Requires little endian mode and FreeBSD currently does not support it Notes: svn path=/head/; revision=501148
* biology/vsearch: Versatile open-source tool for metagenomicsJason W. Bacon2019-05-097-0/+162
VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, rereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering, conversion and merging of paired-end reads. The aim of this project is to create an alternative to the USEARCH tool developed by Robert C. Edgar (2010). Notes: svn path=/head/; revision=501147