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* Remove ${PORTSDIR}/ from dependencies, Mk and categories a, b, and c.Mathieu Arnold2016-04-0138-148/+148
* - Update to 1.5.0Dmitry Marakasov2016-03-313-23/+11
* - Use more appropriate BROKEN instead of IGNOREDmitry Marakasov2016-03-291-4/+2
* - Update to 5.12.0Wen Heping2016-03-273-5/+7
* - Clarify LICENSEDmitry Marakasov2016-03-241-4/+3
* Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA.Dmitry Marakasov2016-03-246-0/+146
* New port: biology/bowtie2.Raphael Kubo da Costa2016-03-236-0/+134
* New port: biology/slclust.Raphael Kubo da Costa2016-03-236-0/+85
* Trimmomatic performs a variety of useful trimming tasks for illuminaWen Heping2016-03-175-0/+41
* New port: biology/p5-transdecoderKurt Jaeger2016-03-165-0/+88
* biology/seqtools: 4.40.0 -> 4.41.1Kurt Jaeger2016-03-143-4/+6
* Always set the DEFAULT github DISTFILE with .tar.gz for EXTRACT_SUFX.Mathieu Arnold2016-03-081-2/+2
* New port: biology/bowtie.Raphael Kubo da Costa2016-03-056-0/+194
* New port: biology/vcftools.Raphael Kubo da Costa2016-02-265-0/+59
* - Update to 3.2.0Wen Heping2016-02-263-34/+62
* - Update to 1.14.7Danilo Egea Gondolfo2016-02-202-3/+3
* - Update to 1.34Wen Heping2016-02-122-3/+3
* biology/seqtools: 4.39.3 -> 4.40.0Kurt Jaeger2016-02-062-3/+3
* biology/mapm3: document ncurses rqmt (USES+=ncurses), respect LDFLAGSJohn Marino2016-02-011-0/+2
* biology/samtools: document ncurses requirement (USES+=ncurses)John Marino2016-02-011-1/+1
* biology/molden: updated distfile, take maintainerKurt Jaeger2016-01-202-4/+4
* Mark BROKEN: checksum and size mismatchAntoine Brodin2016-01-201-0/+1
* The bedtools utilities are a suite of tools for performing a wide range ofWen Heping2016-01-196-0/+135
* biology/molden: 5.0.7 -> 5.4Kurt Jaeger2016-01-185-192/+799
* mark ports that don't work with Ruby 2.3Steve Wills2016-01-171-0/+1
* Convert LICENSE= "GPLxx # or later" to "GPLxx+"Dmitry Marakasov2016-01-124-4/+4
* Add Public Domain support to ports license framework. You can now useDmitry Marakasov2016-01-121-3/+1
* Remove deprecated PLIST_DIRSTRY and also no longer needed PLIST_DIRSPawel Pekala2016-01-091-2/+0
* biology/crux is not jobs safeJohn Marino2015-12-301-0/+2
* biology/htslib: Replace FreeBSD-specific fix with a generic oneJohn Marino2015-12-291-5/+4
* Cleanup GH_* and variables order.Mathieu Arnold2015-12-293-3/+1
* biology/consed: undeprecate, it presumably builds fine but it is restricted.Rene Ladan2015-12-261-5/+1
* - Update to 7.266Wen Heping2015-12-255-42/+133
* biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3Jason Unovitch2015-12-2527-173/+930
* mark some of the ports that don't build on powerpc64 for meSteve Wills2015-12-134-0/+7
* - Update maintainer mail addressMartin Wilke2015-12-1112-23/+22
* - Update to 1.32Wen Heping2015-12-113-6/+8
* biology/seqtools: 4.39.2 -> 4.39.3Kurt Jaeger2015-12-052-3/+3
* biology/seqtools: 4.39.1 -> 4.39.2Kurt Jaeger2015-12-012-3/+3
* - Mark BROKEN: checksum mismatch:Dmitry Marakasov2015-11-291-0/+2
* Remove expired ports:Rene Ladan2015-11-2815-933/+0
* biology/platon: fix fetchingRuslan Makhmatkhanov2015-11-193-6/+4
* - Switch to options helpersDmitry Marakasov2015-11-191-1/+1
* biology/seqtools: Fix distinfo, WWWKurt Jaeger2015-11-182-3/+3
* biology/seqtools: 4.39.0 -> 4.39.1Kurt Jaeger2015-11-132-3/+3
* - Update to 1.14.6Danilo Egea Gondolfo2015-11-093-4/+4
* Mark a few ports BROKEN: unfetchableAntoine Brodin2015-11-091-0/+2
* biology/seqtools: 4.36 -> 4.39.0Kurt Jaeger2015-11-082-3/+3
* - Update to 1.14.5Danilo Egea Gondolfo2015-11-063-4/+4
* Fix ports that confused the meaning of WRKDIR and WRKSRC.Mathieu Arnold2015-11-051-5/+5
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