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* The bedtools utilities are a suite of tools for performing a wide range ofWen Heping2016-01-196-0/+135
* biology/molden: 5.0.7 -> 5.4Kurt Jaeger2016-01-185-192/+799
* mark ports that don't work with Ruby 2.3Steve Wills2016-01-171-0/+1
* Convert LICENSE= "GPLxx # or later" to "GPLxx+"Dmitry Marakasov2016-01-124-4/+4
* Add Public Domain support to ports license framework. You can now useDmitry Marakasov2016-01-121-3/+1
* Remove deprecated PLIST_DIRSTRY and also no longer needed PLIST_DIRSPawel Pekala2016-01-091-2/+0
* biology/crux is not jobs safeJohn Marino2015-12-301-0/+2
* biology/htslib: Replace FreeBSD-specific fix with a generic oneJohn Marino2015-12-291-5/+4
* Cleanup GH_* and variables order.Mathieu Arnold2015-12-293-3/+1
* biology/consed: undeprecate, it presumably builds fine but it is restricted.Rene Ladan2015-12-261-5/+1
* - Update to 7.266Wen Heping2015-12-255-42/+133
* biology/{bcftools,htslib,samtools}: update 1.2.x -> 1.3Jason Unovitch2015-12-2527-173/+930
* mark some of the ports that don't build on powerpc64 for meSteve Wills2015-12-134-0/+7
* - Update maintainer mail addressMartin Wilke2015-12-1112-23/+22
* - Update to 1.32Wen Heping2015-12-113-6/+8
* biology/seqtools: 4.39.2 -> 4.39.3Kurt Jaeger2015-12-052-3/+3
* biology/seqtools: 4.39.1 -> 4.39.2Kurt Jaeger2015-12-012-3/+3
* - Mark BROKEN: checksum mismatch:Dmitry Marakasov2015-11-291-0/+2
* Remove expired ports:Rene Ladan2015-11-2815-933/+0
* biology/platon: fix fetchingRuslan Makhmatkhanov2015-11-193-6/+4
* - Switch to options helpersDmitry Marakasov2015-11-191-1/+1
* biology/seqtools: Fix distinfo, WWWKurt Jaeger2015-11-182-3/+3
* biology/seqtools: 4.39.0 -> 4.39.1Kurt Jaeger2015-11-132-3/+3
* - Update to 1.14.6Danilo Egea Gondolfo2015-11-093-4/+4
* Mark a few ports BROKEN: unfetchableAntoine Brodin2015-11-091-0/+2
* biology/seqtools: 4.36 -> 4.39.0Kurt Jaeger2015-11-082-3/+3
* - Update to 1.14.5Danilo Egea Gondolfo2015-11-063-4/+4
* Fix ports that confused the meaning of WRKDIR and WRKSRC.Mathieu Arnold2015-11-051-5/+5
* biology/seaview: Broken, Does not fetch (checksum mismatch)John Marino2015-11-021-0/+2
* - Update to 2015.09.21Guido Falsi2015-10-275-25/+60
* Deprecate ports broken for more than 6 monthsAntoine Brodin2015-10-254-0/+8
* biology/seaview: Update version 4.5.4.7=>4.5.4.8Muhammad Moinur Rahman2015-10-202-3/+3
* - Update to 36.3.8Danilo Egea Gondolfo2015-10-162-4/+4
* - Add LICENSE_FILEDmitry Marakasov2015-10-141-1/+2
* - Pet portlintDmitry Marakasov2015-10-141-4/+5
* - Fix typoSunpoet Po-Chuan Hsieh2015-10-101-1/+1
* - Update to 1.14.4Danilo Egea Gondolfo2015-10-073-4/+4
* - Update to 1.14.3Danilo Egea Gondolfo2015-10-013-4/+4
* biology/seaview: Update version 4.5.4.6=>4.5.4.7Muhammad Moinur Rahman2015-10-012-4/+3
* biology/grappa: define license (GPLv2)Ruslan Makhmatkhanov2015-09-251-0/+2
* BWA is a program for aligning sequencing reads against a large referenceRuslan Makhmatkhanov2015-09-258-0/+84
* Fast indexing and retrieval of FASTA records from flat file data bases.Ruslan Makhmatkhanov2015-09-255-0/+85
* Simple and quick FastQ and FastA tool for file reading and conversion.Ruslan Makhmatkhanov2015-09-254-0/+39
* FastTree infers approximately-maximum-likelihood phylogenetic trees fromRuslan Makhmatkhanov2015-09-254-0/+41
* The FASTX-Toolkit is a collection of command line tools for Short-ReadsRuslan Makhmatkhanov2015-09-255-0/+57
* Gordon's text utilities.Ruslan Makhmatkhanov2015-09-255-0/+50
* Typos, whitespace and capitalization fixes (A-F).Jimmy Olgeni2015-09-201-1/+1
* - Use compiler:openmp instead of gccWen Heping2015-09-191-4/+1
* CD-HIT is a very widely used program for clustering and comparing protein orWen Heping2015-09-195-0/+81
* Make all GNUstep ports install into the System domain so that the Local domai...David Chisnall2015-09-192-66/+66
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