aboutsummaryrefslogtreecommitdiff
path: root/biology
Commit message (Collapse)AuthorAgeFilesLines
* - fix build under gcc 3.3Pete Fritchman2003-05-191-1/+8
| | | | | | | | | | - respect CC/CFLAGS PR: 52013 Submitted by: maintainer Notes: svn path=/head/; revision=81325
* Back out previous commit, the port was fixed a few days ago.Kris Kennaway2003-05-181-7/+1
| | | | Notes: svn path=/head/; revision=81284
* BROKEN on 5.1: bad C++Kris Kennaway2003-05-182-2/+14
| | | | Notes: svn path=/head/; revision=81207
* - Update to latest release.Michael Landin2003-05-145-62/+3
| | | | | | | | | | | | - Better autoconf/automake so patches no longer needed - Changed dependency. (now wxgtk-devel) PR: 51741 Submitted by: maintainer Approved by: roberto(mentor) Notes: svn path=/head/; revision=80976
* BROKEN: Broken pkg-plistKris Kennaway2003-05-061-0/+2
| | | | Notes: svn path=/head/; revision=80298
* Update to 2003.04.21Tilman Keskinoz2003-05-058-79/+59
| | | | | | | | PR: 51709 Submitted by: Tony Maher <tonymaher@optushome.com.au> Notes: svn path=/head/; revision=80172
* - unbreak on 4.x: add dependency on gdkpixbuf, fix Makefiles to compile withPete Fritchman2003-05-033-44/+30
| | | | | | | | | | | the correct libraries - add a WITH_OPTIMIZED_CFLAGS knob PR: 51614 Submitted by: maintainer Notes: svn path=/head/; revision=80062
* Updated to 0.8.6.Maho Nakata2003-05-035-362/+283
| | | | | | | | Submitted by: M. L. Dodson <bdodson@scms.utmb.EDU> Pkg-plist by: maho Notes: svn path=/head/; revision=80032
* Update to 20030425 snapshotMario Sergio Fujikawa Ferreira2003-04-253-6/+6
| | | | Notes: svn path=/head/; revision=79643
* Remove USE_GNOMENG.Joe Marcus Clarke2003-04-183-3/+0
| | | | Notes: svn path=/head/; revision=79180
* Update the biology/tinker Makefile so it builds on -currentEdwin Groothuis2003-03-301-1/+6
| | | | | | | | PR: ports/50371 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov> Notes: svn path=/head/; revision=77737
* * Fix build with GCC3 (-CURRENT).Christian Weisgerber2003-03-255-24/+89
| | | | | | | | | | * Honor CXX/CXXFLAGS. * Use predefined DOCSDIR and EXAMPLESDIR variables. Approved by: maintainer timeout Notes: svn path=/head/; revision=77447
* Clear moonlight beckons.Ade Lovett2003-03-0728-14/+14
| | | | | | | | | | Requiem mors pacem pkg-comment, And be calm ports tree. E Nomini Patri, E Fili, E Spiritu Sancti. Notes: svn path=/head/; revision=77045
* Retire comment file.Trevor Johnson2003-03-012-1/+1
| | | | Notes: svn path=/head/; revision=76700
* Update to 20030227 snapshotMario Sergio Fujikawa Ferreira2003-02-282-2/+2
| | | | Notes: svn path=/head/; revision=76600
* De-pkg-commentMario Sergio Fujikawa Ferreira2003-02-232-1/+1
| | | | Notes: svn path=/head/; revision=76311
* De-pkg-comment.Akinori MUSHA2003-02-2172-36/+36
| | | | Notes: svn path=/head/; revision=76030
* De-pkg-comment.Akinori MUSHA2003-02-208-4/+4
| | | | Notes: svn path=/head/; revision=75951
* Fix install and packaging list.Christian Weisgerber2003-02-183-59/+67
| | | | | | | Reported by: kris Notes: svn path=/head/; revision=75806
* De-pkg-comment.Akinori MUSHA2003-02-182-1/+1
| | | | Notes: svn path=/head/; revision=75771
* Update to 1.83.Christian Weisgerber2003-02-1513-182/+179
| | | | | | | | PR: 48264 Submitted by: David A. Bader <dbader@eece.unm.edu> Notes: svn path=/head/; revision=75592
* * Update to 3.13.Christian Weisgerber2003-02-145-20/+7
| | | | | | | | | | PR: 48255 Submitted by: David A. Bader <dbader@eece.unm.edu> * Also honor CC/CFLAGS. Notes: svn path=/head/; revision=75540
* Add dependency on security/p5-Digest-MD5Edwin Groothuis2003-02-131-0/+3
| | | | | | | Noticed on: bento Notes: svn path=/head/; revision=75433
* Update to version 0.5.1.Christian Weisgerber2003-02-118-68/+4
| | | | | | | | PR: 48047 Submitted by: Ports Fury Notes: svn path=/head/; revision=75308
* Remove gaussian98Kris Kennaway2003-02-051-1/+0
| | | | | | | Pointy hat to: maho Notes: svn path=/head/; revision=74811
* Delete biology/gaussian98. Maintain is too hard andMaho Nakata2003-01-3111-820/+0
| | | | | | | gray in license Notes: svn path=/head/; revision=74389
* Update to 0.4.0.Akinori MUSHA2003-01-293-14/+26
| | | | Notes: svn path=/head/; revision=74202
* add '-f' argument to rm so that the script always work even if aMario Sergio Fujikawa Ferreira2003-01-231-1/+1
| | | | | | | | | file is not there Submitted by: Frerich Raabe <frerich.raabe@gmx.de> Notes: svn path=/head/; revision=73876
* New Port: biology/actEdwin Groothuis2003-01-166-0/+1031
| | | | | | | | PR: ports/35753 Submitted by: Camson Huynh <chuynh@biolateral.com.au> Notes: svn path=/head/; revision=73258
* Add missing fileKris Kennaway2003-01-141-0/+1
| | | | Notes: svn path=/head/; revision=73104
* Add some missing filesKris Kennaway2003-01-141-0/+4
| | | | Notes: svn path=/head/; revision=73078
* Update to 3.8Tilman Keskinoz2003-01-083-22/+6
| | | | | | | Approved by: rmiya@cc.hirosaki-u.ac.jp (maintainer) Notes: svn path=/head/; revision=72740
* update biology/babel to properly output mm3 files.Edwin Groothuis2003-01-032-1/+93
| | | | | | | | PR: ports/42425 Submitted by: Glenn Johnson <glennpj@charter.net> Notes: svn path=/head/; revision=72369
* upgrade to 3.7Ying-Chieh Liao2003-01-025-193/+255
| | | | | | | | PR: 44957 Submitted by: maintainer Notes: svn path=/head/; revision=72130
* add missing includeYing-Chieh Liao2002-12-291-0/+10
| | | | | | | | PR: 46584 Submitted by: Ports Fury Notes: svn path=/head/; revision=71967
* fix build on -currentYing-Chieh Liao2002-12-225-0/+53
| | | | | | | | PR: 46459 Submitted by: Ports Fury Notes: svn path=/head/; revision=71779
* Fix typo: distribfold.org -> distributedfolding.orgMario Sergio Fujikawa Ferreira2002-12-192-2/+2
| | | | | | | Submitted by: Matt Mills <alpha@vanity.com> Notes: svn path=/head/; revision=71729
* o Update to 20021105 snapshotMario Sergio Fujikawa Ferreira2002-12-192-4/+9
| | | | | | | | | | | | | o Depend on compat4x on OSVERSION >= 500000 since these are 4.5-RELEASE binaries o House a copy under MASTER_SITE_LOCAL: the local copy will be versioned, developer has yet to be convinced of the advantages of distributing versioned files Approved by: portmgr (knu) Notes: svn path=/head/; revision=71722
* Mark BROKEN due to "Unknown problem"Mario Sergio Fujikawa Ferreira2002-11-251-0/+2
| | | | | | | Submitted by: maintainer Notes: svn path=/head/; revision=71069
* unbroke by upgrade to 20021018Ying-Chieh Liao2002-11-208-30/+72
| | | | | | | | | | drop maintainership PR: 45466 Submitted by: old maintainer Notes: svn path=/head/; revision=70600
* add treepuzzle 5.1Ying-Chieh Liao2002-11-206-0/+41
| | | | | | | | | | Maximum likelihood phylogeny reconstruction using quartets PR: 45241 Submitted by: Jan Lentfer <lentferj@neslonek.bio.tu-darmstadt.de> Notes: svn path=/head/; revision=70552
* 1. add a missing dependency on png and unbreak.Maho Nakata2002-11-191-2/+3
| | | | | | | 2. change e-mail address of maho. Notes: svn path=/head/; revision=70527
* o Rollback PORTCOMMENT modifications while this feature's implementationMario Sergio Fujikawa Ferreira2002-11-106-6/+3
| | | | | | | | | | | is better studied o Turn PORTCOMMENT variable in Makefile back into pkg-comment files Approved by: kris (portmgr hat), portmgr, re (silence) Notes: svn path=/head/; revision=69808
* Update WWWTilman Keskinoz2002-11-071-1/+1
| | | | Notes: svn path=/head/; revision=69697
* Updated to fix problems as stated in PR ports/42915Edwin Groothuis2002-11-073-2/+42
| | | | | | | | PR: ports/42915 Submitted by: Tony Maher <tonym@biolateral.com.au> Notes: svn path=/head/; revision=69663
* Fix PORTCOMMENTs that were killing INDEX builds.Adam Weinberger2002-11-072-2/+1
| | | | | | | | 105 pointy hats to: me Approved by: pat Notes: svn path=/head/; revision=69625
* Use PORTCOMMENT in the Makefile, and whack the pkg-comment.Adam Weinberger2002-11-068-4/+8
| | | | | | | Approved by: pat Notes: svn path=/head/; revision=69612
* Modify replace RE to match syntax of sed now ("\)" -> ")"Edwin Groothuis2002-11-051-8/+8
| | | | | | | Noticed by: bento Notes: svn path=/head/; revision=69489
* PERL -> REINPLACEEdwin Groothuis2002-11-044-10/+15
| | | | | | | And some ports have USE_PERL5=yes now. Notes: svn path=/head/; revision=69436
* PERL -> REINPLACEEdwin Groothuis2002-11-041-1/+2
| | | | | | | Noticed on: bento Notes: svn path=/head/; revision=69424