aboutsummaryrefslogtreecommitdiff
path: root/biology
Commit message (Expand)AuthorAgeFilesLines
* - Update to 0.11.1Martin Wilke2017-05-072-4/+4
* - Update to 1.5.1Martin Wilke2017-05-072-6/+4
* bx-python is a python library and associated set of scripts to allow for rapidMartin Wilke2017-05-064-0/+47
* pysam is a lightweight wrapper of the htslib C-API and provides facilities toMartin Wilke2017-05-065-0/+47
* - Update to 1.69Wen Heping2017-05-032-4/+4
* devel/boost-*: update to 1.64.0Jan Beich2017-05-021-1/+1
* Update math/gsl to 2.3Tobias C. Berner2017-05-021-0/+1
* Provide error messages for some ports failing on aarch64, and, in aMark Linimon2017-05-012-0/+5
* 2017-04-30 devel/stormlib-ghost++: Unfetchable for more than six months (goog...Larry Rosenman2017-04-305-79/+0
* biology/py-biom-format: Update to version 2.1.6Joseph Mingrone2017-04-292-4/+5
* - Fix shebangsMartin Wilke2017-04-221-2/+3
* - Fix shebangsMartin Wilke2017-04-221-3/+4
* - Fix shebangsDmitry Marakasov2017-04-211-3/+7
* biology/diamond: Update to version 0.8.38Joseph Mingrone2017-04-212-6/+5
* biology/seaview: Update version 4.6=>4.6.1Muhammad Moinur Rahman2017-04-112-4/+5
* biology/diamond: Update to version 0.8.37Joseph Mingrone2017-04-022-5/+5
* Bump PORTREVISIONs for ports depending on the canonical version of GCC andGerald Pfeifer2017-04-0116-11/+16
* Update devel/tbb to 2017.5Ganael LAPLANCHE2017-03-071-0/+1
* Mark the remaining ports depending on Google Code as DEPRECATED, with anMathieu Arnold2017-03-031-0/+2
* - Update to 1.42Wen Heping2017-03-012-4/+4
* Fix USE_GITHUB's GH_TAGNAME usage.Mathieu Arnold2017-02-282-5/+5
* biology/plinkseq: unbreak with clang 4.0Jan Beich2017-02-272-0/+12
* biology/bowtie2: update to 2.3.0Jan Beich2017-02-274-6/+48
* Mark a few more ports that create large logfiles broken on armv6.Mark Linimon2017-02-261-0/+2
* Mark various ports as broken on armv6: invokes x86 asm.Mark Linimon2017-02-262-0/+2
* - Update to 1.14.9Danilo Egea Gondolfo2017-02-243-6/+12
* Move -fPIC to where Linux puts it so it is limited to a single library.Tijl Coosemans2017-02-132-4/+2
* biology/diamond: Update to version 0.8.36.Joseph Mingrone2017-02-122-4/+4
* biology/molden: Unbreak port, regenerate checksums, increment PORTREVISION.Johannes M Dieterich2017-02-112-7/+5
* Add -fPIC to various ports to enable them to build on armv6.Mark Linimon2017-02-091-8/+3
* - Mark BROKEN: does not fetch, size/checksum mismatchDmitry Marakasov2017-02-071-0/+2
* Update to 1.5.1Sunpoet Po-Chuan Hsieh2017-02-062-9/+8
* biology/diamond: Update to version 0.8.35.Joseph Mingrone2017-02-052-5/+5
* Move devel/rubygem-bio to biology/rubygem-bioSunpoet Po-Chuan Hsieh2017-02-054-0/+36
* Bump PORTREVISION for ports affected by the fix the last commit.Mathieu Arnold2017-01-313-1/+3
* Mark various ports broken on aarch64 and armv6.Mark Linimon2017-01-311-0/+2
* biology/diamond: Update to version 0.8.34.Joseph Mingrone2017-01-232-4/+4
* Update WWW: SF redirects to https://sourceforge.net/projects/<PROJECT_NAME>/Sunpoet Po-Chuan Hsieh2017-01-203-3/+3
* biology/diamond: Update to version 0.8.32.Joseph Mingrone2017-01-162-4/+4
* biology/diamond: Update to version 0.8.31.Joseph Mingrone2017-01-122-4/+4
* - Remove always-true/false conditions after FreeBSD 9, 10.1, 10.2 EOLDmitry Marakasov2017-01-092-15/+3
* devel/boost-*: update to 1.63.0Jan Beich2017-01-061-1/+1
* Never set WRKSRC when using USE_GITHUB.Mathieu Arnold2017-01-032-4/+0
* Assume "pkg-config zlib" works after 9.x reached EOLJan Beich2017-01-031-3/+0
* Remove BROKEN_FreeBSD_9Sunpoet Po-Chuan Hsieh2017-01-012-3/+0
* biology/diamond: Update to version 0.8.30Joseph Mingrone2016-12-302-4/+4
* biology/ncbi-blast+: Add MAKE_JOBS_UNSAFEJoseph Mingrone2016-12-221-0/+2
* - Update to 1.007001Sunpoet Po-Chuan Hsieh2016-12-202-4/+4
* biology/bowtie2: Update to version 2.2.9Joseph Mingrone2016-12-202-14/+18
* biology/cd-hit: Update to bug-fix release 4.6.6Joseph Mingrone2016-12-202-5/+4
generated by cgit v1.2.3 (git 2.25.1) at 2024-11-05 07:57:21 +0000