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* biology/igv: Update 2.4.15 -> 2.4.16Yuri Victorovich2018-11-182-6/+6
* biology/molden: update to 5.8.2Johannes M Dieterich2018-11-133-10/+45
* biology/seqan-apps: fix build with GCC-based architecturesSteve Wills2018-11-091-2/+4
* biology/molden: Unbreak: fix the problem that it can't find libgcc_s.so from gccYuri Victorovich2018-11-071-1/+2
* Fix build failure with base GCC because of double typedefs.Mark Linimon2018-11-051-0/+48
* Remove the incorrect typedefs to fix build on tier-2.Mark Linimon2018-11-052-0/+29
* Remove the inccorrect typedefs to fix build on tier-2.Mark Linimon2018-11-051-4/+0
* biology/igv: Update 2.4.10 -> 2.4.15Yuri Victorovich2018-11-043-24/+21
* biology/canu: Upgrade to 1.8, add experimental SLURM integrationJason W. Bacon2018-11-045-31/+102
* biology/bowtie: Patch for gcc8 and clean upJason W. Bacon2018-11-032-6/+17
* biology/bowtie: Revert previous commit with missing log messageJason W. Bacon2018-11-032-17/+5
* biology/bowtie: PatchJason W. Bacon2018-11-032-5/+17
* biology/py-loompy: Update 2.0.15 -> 2.0.16Yuri Victorovich2018-10-302-4/+4
* biology/iqtree: Update to version 1.6.8Joseph Mingrone2018-10-282-4/+4
* Fix build with tier-2 arches.Mark Linimon2018-10-281-1/+7
* biology/py-pyfaidx: Update 0.5.5.1 -> 0.5.5.2Yuri Victorovich2018-10-282-4/+4
* biology/p5-transdecoder: Upgrade to 5.4.0Jason W. Bacon2018-10-234-30/+44
* biology/hyphy: Update to version 2.3.14.16Joseph Mingrone2018-10-203-5/+11
* biology/py-loompy: Update 2.0.14 -> 2.0.15Yuri Victorovich2018-10-192-4/+4
* New port: biology/py-gffutils: Work with GFF and GTF files in a flexible data...Yuri Victorovich2018-10-194-0/+36
* New port: biology/py-pyfaidx: Efficient pythonic random access to fasta subse...Yuri Victorovich2018-10-194-0/+38
* New port: biology/py-gtfparse: Parsing tools for GTF (gene transfer format) f...Yuri Victorovich2018-10-194-0/+32
* biology/ngs-sdk: Update 2.9.2 -> 2.9.3Yuri Victorovich2018-10-183-5/+5
* biology/py-orange3-single-cell: Update 0.8.1 -> 0.8.2Yuri Victorovich2018-10-172-4/+4
* biology/iqtree: Update to version 1.6.7.1Joseph Mingrone2018-10-162-4/+4
* biology/py-orange3-single-cell: Update 0.8.0 -> 0.8.1Yuri Victorovich2018-10-142-6/+11
* biology/py-orange3-bioinformatics: Update 3.2.0 -> 3.2.2Yuri Victorovich2018-10-142-4/+4
* Deprecate most glib12 consumersAntoine Brodin2018-10-121-0/+3
* Update devel/tbb to version 2019.1 and bump dependent ports' revisionsGanael LAPLANCHE2018-10-111-1/+1
* Update to 1.73Sunpoet Po-Chuan Hsieh2018-10-102-6/+10
* New port: biology/ncbi-cxx-toolkit: NCBI C++ ToolkitYuri Victorovich2018-10-085-0/+70
* biology/ncbi-toolkit: Update 2012.06.20 -> 2017.01.06Yuri Victorovich2018-10-076-175/+87
* biology/tinker: Update 7.1.3 -> 8.4.4; Move to science/Yuri Victorovich2018-10-0713-1004/+0
* biology/py-biom-format: Update to version 2.1.7Joseph Mingrone2018-10-062-16/+14
* Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, exceptDag-Erling Smørgrav2018-10-0615-30/+30
* Update devel/tbb to version 2019 and bump dependent port's revisionsGanael LAPLANCHE2018-10-041-0/+1
* - Update to 1-14-10Danilo Egea Gondolfo2018-09-284-8/+9
* - Unbreak by adding missing pkg-plistWen Heping2018-09-282-2/+136
* Allow building on powerpc64.Mark Linimon2018-09-271-1/+1
* Update Objective-C LLVM version to 6.0.Brooks Davis2018-09-261-1/+1
* Change 4 ports from net/mpich2 to net/mpichYuri Victorovich2018-09-221-3/+5
* - Update to 1.63Wen Heping2018-09-222-4/+4
* Fix build on gcc-based archs by updating USES.Mark Linimon2018-09-221-1/+1
* Update to 1.5.2Sunpoet Po-Chuan Hsieh2018-09-212-6/+7
* New port: biology/py-loompy: Work with .loom files for single-cell RNA-seq dataYuri Victorovich2018-09-214-0/+44
* biology/py-cutadapt: Upgrade to 1.18Jason W. Bacon2018-09-203-50/+9
* biology/ngs-sdk: Update 2.9.1 -> 2.9.2Yuri Victorovich2018-09-193-5/+5
* Upgrade these ports to USES=compiler:c++11-lang to fix build on gcc-basedMark Linimon2018-09-181-1/+1
* More precisely specify USES=compiler to fix build on gcc-basedMark Linimon2018-09-183-3/+3
* biology/py-pysam: Update 0.15.0 -> 0.15.1Yuri Victorovich2018-09-172-4/+4
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