aboutsummaryrefslogtreecommitdiff
path: root/science
Commit message (Collapse)AuthorAgeFilesLines
* Purge the last vestiges of the (really) old autotools world order.Ade Lovett2006-02-261-1/+0
| | | | | | | | | Since all these items were commented out, this is a null-op commit. Approved by: portmgr (implicit) Notes: svn path=/head/; revision=156828
* Fix `make extract' on FreeBSD-5.4 by using archivers/bsdtar.Thierry Thomas2006-02-251-0/+5
| | | | | | | | Reported by: Courtney Thomas <cc.thomas (at) earthlink.net> Approved by: portmgr (marcus) Notes: svn path=/head/; revision=156809
* Fix MASTER_SITES and make fetchable again.Tom McLaughlin2006-02-252-2/+4
| | | | | | | Approved by: portmgr (marcus) Notes: svn path=/head/; revision=156795
* Chase another silent update.Thierry Thomas2006-02-242-5/+5
| | | | | | | | | | Diff available at <http://pompo.net/ports/cdf31-dist_060216-030224.diff>: minor fixes for Linux Intel's Fortran compiler and cdfcvt. Approved by: portmgr (krion) Notes: svn path=/head/; revision=156781
* Conversion to a single libtool environment.Ade Lovett2006-02-2333-54/+282
| | | | | | | Approved by: portmgr (kris) Notes: svn path=/head/; revision=156749
* Update to 1.2.6. [1]Sam Lawrance2006-02-174-8/+31
| | | | | | | | | | Add a patch to unbreak compilation with mpich. [2] PR: ports/92909 [1], ports/93176 [2] Submitted by: Kay Lehmann <kay_lehmann@web.de> (maintainer) Notes: svn path=/head/; revision=156211
* Chase another silent update. Since this seems usual, define a DIST_SUBDIR.Thierry Thomas2006-02-162-4/+5
| | | | | | | | | | Full diff at <http://pompo.net/ports/cdf31-dist_060209_060216.diff> (fixes into cdfcvt). Reported by: pointyhat via Kris Notes: svn path=/head/; revision=156196
* Correct the author information in pkg-descr for science/buddy as requested byEmanuel Haupt2006-02-151-1/+2
| | | | | | | | | | the author. PR: 93372 Submitted by: Li-Lun Wang (Leland Wang) <llwang@infor.org> (maintainer) Notes: svn path=/head/; revision=156104
* Change `NOT_FOR_ARCHS' with `if ARCH then BROKEN'Vasil Dimov2006-02-131-3/+6
| | | | | | | | Noticed by: danfe Approved by: garga (mentor) Notes: svn path=/head/; revision=155919
* MINC (Medical Imaging NetCDF) is a medical imaging data format and anThierry Thomas2006-02-1211-0/+335
| | | | | | | | | | | | | associated set of tools and libraries. MINC was created in 1993 by Peter Neelin at the McConnell Brain Imaging Centre of the Montreal Neurological Institute. Many others have contributed to the design and implementation MINC over the years. PR: ports/91918 Submitted by: Jason W. Bacon <bacon (at) smithers.neuro.mcw.edu> Notes: svn path=/head/; revision=155836
* Re-add patch-Makefile to respect CFLAGS / FFLAGS / CC & co.Thierry Thomas2006-02-121-0/+26
| | | | Notes: svn path=/head/; revision=155824
* Chase a silent update and make fetchable again.Thierry Thomas2006-02-115-108/+5
| | | | | | | | | | | | | | - our patches to support FreeBSD have been included; - support of Intel C++ and Fortran compilers for Linux has been added. Full diff available at <http://pompo.net/ports/cdf31-dist_060130_060209.diff>. Reported by: Ion-Mihai Tetcu on #bsdports Notes: svn path=/head/; revision=155791
* Remove empty patch file.Eric Anholt2006-02-111-0/+0
| | | | | | | Reported by: thierry Notes: svn path=/head/; revision=155789
* Mark NOT_FOR_ARCHS=sparc64, maintainer did not fix the build for 7 daysVasil Dimov2006-02-091-0/+3
| | | | | | | | | after kris' mail Approved by: garga (mentor) Notes: svn path=/head/; revision=155603
* Remove expired port science/glensVasil Dimov2006-02-087-115/+0
| | | | | | | Approved by: garga (mentor) Notes: svn path=/head/; revision=155503
* - The official download site is down, add a mirror.Thierry Thomas2006-02-032-3/+13
| | | | | | | | | - Try to fix on sparc64. Reported by: pointyhat via Kris Notes: svn path=/head/; revision=155159
* Fix another silent update.Thierry Thomas2006-01-311-3/+3
| | | | | | | | | Don't bump PORTREVISION, the only diff is in Release.notes. Reported by: pointyhat via Kris Notes: svn path=/head/; revision=154871
* Repocopy math/netcdf to science/netcdf, along with cdf, hdf and hdf5.Thierry Thomas2006-01-306-5/+6
| | | | | | | | | PR: 92497 Submitted by: /me Repocopied by: marcus Notes: svn path=/head/; revision=154853
* Changes to the port:Vasil Dimov2006-01-302-20/+20
| | | | | | | | | | | | | Author fixed the problem with filename versioning by placing filenames without version in their name in a subdirectory on the web server. Changes to the software itself: -DPIC -fPIC used only for amd64 and ia64, suggested by kris Approved by: garga (mentor) Notes: svn path=/head/; revision=154785
* Oops... I mixed 3.0 and 3.1 pkg-plist and forgot to take maintainership.Thierry Thomas2006-01-292-1/+6
| | | | | | | Reported by: pointyhat via Kris Notes: svn path=/head/; revision=154745
* Common Data Format (CDF) is a conceptual data abstraction for storingThierry Thomas2006-01-2810-0/+286
| | | | | | | | | | | | | | | | multi-dimensional data sets. The basic component of CDF is a software programming interface that is a device independent view of the CDF data model. The application developer is insulated from the actual physical file format for reasons of conceptual simplicity, device independence, and future expandability. CDF files created on any given platform can be transported to any other platform on to which CDF is ported and used with any CDF tools or layered applications. A comparison between CDF, netCDF, HDF and HDF5 is available at <http://cdf.gsfc.nasa.gov/html/FAQ.html>. Notes: svn path=/head/; revision=154665
* Update Makefile.FreeBSD_PORT's checksum.Vasil Dimov2006-01-261-3/+3
| | | | | | | | | | -DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it compile on amd64. Approved by: garga (mentor) Notes: svn path=/head/; revision=154496
* Add new port science/afniVasil Dimov2006-01-256-0/+739
| | | | | | | | | | | | | | | | AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing 3 dimensional images, especially functional MRI images used in brain mapping research. WWW: http://afni.nimh.nih.gov/ PR: ports/90752 Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu> Reviewed by: garga (mentor) Approved by: garga (mentor) Notes: svn path=/head/; revision=154438
* SHA256ifyEdwin Groothuis2006-01-241-1/+2
| | | | | | | Approved by: krion@ Notes: svn path=/head/; revision=154318
* SHA256ifyEdwin Groothuis2006-01-2428-0/+39
| | | | | | | Approved by: krion@ Notes: svn path=/head/; revision=154303
* The OpenFOAM (Open Field Operation and Manipulation) CFD Toolbox can simulateThierry Thomas2006-01-2241-0/+9979
| | | | | | | | | | | | | | anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics, electromagnetics and the pricing of financial options. WWW: http://www.opencfd.co.uk/openfoam/index.html PR: ports/91886 Submitted by: thierry Notes: svn path=/head/; revision=154148
* Update to 4.6.5Maho Nakata2006-01-222-3/+4
| | | | | | | Notified by: fenner, kris, and edwin Notes: svn path=/head/; revision=154118
* Replace ugly "@unexec rmdir %D... 2>/dev/null || true" with @dirrmtryEdwin Groothuis2006-01-227-74/+74
| | | | | | | | Approved by: krion@ PR: ports/88711 (related) Notes: svn path=/head/; revision=154116
* [1] Update to 2.4.2Eric Anholt2006-01-213-4/+78
| | | | | | | | | | | | | [2] Install shared libraries and some cmake files so ports depending on paraview can build. Not very tested, because it crashes my X Server (oops), though I suspect the previous version would have as well if I'd pre-tested. PR: [2] 91885 Submitted by: [2] Thierry Notes: svn path=/head/; revision=154043
* BROKEN on ia64: gcc internal error during buildKris Kennaway2006-01-191-1/+7
| | | | Notes: svn path=/head/; revision=153927
* - Update to 0.6.4Pav Lucistnik2006-01-192-4/+4
| | | | Notes: svn path=/head/; revision=153888
* - Update to 0.6.2Pav Lucistnik2006-01-173-4/+16
| | | | | | | | | - Fix install [1] Reported by: krismail [1] Notes: svn path=/head/; revision=153725
* - Update graphics/libglut to 6.4.1.Sergey Matveychuk2006-01-126-6/+9
| | | | | | | | | | | | | | - Shared lib version and PORTREVISION bumb for all affected ports. While I'm here: - Remove USE_MESA knob where it was (35 ports). It marked as depricated for 2 years. PR: ports/90247 Submitted by: Ermal Lu?i <eri--@albabsd.org> Notes: svn path=/head/; revision=153347
* - Update to 0.6.3Pav Lucistnik2006-01-093-4/+5
| | | | Notes: svn path=/head/; revision=153129
* Update to 2.0.9Edwin Groothuis2006-01-063-9/+27
| | | | | | | Submitted by: Stefan 'Steve' Tell <stefan.tell@crashmail.de> Notes: svn path=/head/; revision=152860
* - Update to 0.4.8Pav Lucistnik2006-01-053-7/+13
| | | | Notes: svn path=/head/; revision=152840
* From: chkversion <kris@FreeBSD.org>Edwin Groothuis2006-01-051-1/+1
| | | | | | | | | | Subject: Ports with version numbers going backwards: graphics/kimdaba, science/gerris... Looks like an issue with Tools/scripts/bumpportrevision, I'll check it in a second. Notes: svn path=/head/; revision=152787
* Chase libversion bumb to libMagick.so.9Edwin Groothuis2006-01-053-3/+4
| | | | | | | PR: ports/91270 Notes: svn path=/head/; revision=152778
* - Update to 2.81Pav Lucistnik2006-01-013-4/+6
| | | | | | | | PR: ports/91169 Submitted by: Rong-En Fan <rafan@infor.org> (maintainer) Notes: svn path=/head/; revision=152536
* Update to 2.4.1.Eric Anholt2005-12-234-307/+310
| | | | Notes: svn path=/head/; revision=151904
* Update to 2.0.0.Sam Lawrance2005-12-183-62/+165
| | | | | | | | PR: ports/90558 Submitted by: Ports Fury Notes: svn path=/head/; revision=151475
* Add V_Sim, a program to visualize atomic structures such as crystals, grainThierry Thomas2005-12-105-0/+202
| | | | | | | boundaries and so on. Notes: svn path=/head/; revision=150833
* Upgrade to 1.1.2.Thierry Thomas2005-12-102-4/+4
| | | | Notes: svn path=/head/; revision=150782
* Bump PORTREVISION and change dependencies to reflect update in graphics/gtsMarcus Alves Grando2005-11-301-2/+2
| | | | Notes: svn path=/head/; revision=150041
* Fix the group and MASTER_SITE_SUBDIR usage.Bill Fenner2005-11-261-4/+5
| | | | | | | Approved by: Oliver Dunkl <odunkl@gmx.net> (MAINTAINER) Notes: svn path=/head/; revision=149581
* Chase some URLs per distfile survey.Mark Linimon2005-11-263-3/+3
| | | | Notes: svn path=/head/; revision=149541
* Mark as deprecated: per distfile survey, mastersite is long gone.Mark Linimon2005-11-261-1/+4
| | | | Notes: svn path=/head/; revision=149539
* Update mastersite to fix fetch, per distfile survey.Mark Linimon2005-11-262-1/+3
| | | | Notes: svn path=/head/; revision=149537
* - Add SHA256Pav Lucistnik2005-11-2523-0/+26
| | | | Notes: svn path=/head/; revision=149449
* - Add SHA256Pav Lucistnik2005-11-253-0/+3
| | | | Notes: svn path=/head/; revision=149432