From 57b28bc623516900aeba72a8e43e0a45059f398c Mon Sep 17 00:00:00 2001 From: Kevin Lo Date: Tue, 13 Mar 2001 14:50:13 +0000 Subject: - Upgrade to version 1.70 - Update WWW PR: 25772 Submitted by: maintainer --- biology/p5-AcePerl/Makefile | 30 +++++++++++++++--------------- biology/p5-AcePerl/distinfo | 2 +- biology/p5-AcePerl/pkg-comment | 2 +- biology/p5-AcePerl/pkg-descr | 2 +- biology/p5-AcePerl/pkg-plist | 23 +++++++++++++++++++++++ 5 files changed, 41 insertions(+), 18 deletions(-) (limited to 'biology/p5-AcePerl') diff --git a/biology/p5-AcePerl/Makefile b/biology/p5-AcePerl/Makefile index ba2a39bd3152..1e9512a8b60c 100644 --- a/biology/p5-AcePerl/Makefile +++ b/biology/p5-AcePerl/Makefile @@ -6,28 +6,28 @@ # PORTNAME= AcePerl -PORTVERSION= 1.67 +PORTVERSION= 1.70 CATEGORIES= biology databases perl5 -MASTER_SITES= http://stein.cshl.org/AcePerl/archive/ \ - ${MASTER_SITE_PERL_CPAN} +MASTER_SITES= ${MASTER_SITE_PERL_CPAN} MASTER_SITE_SUBDIR=Ace PKGNAMEPREFIX= p5- MAINTAINER= bio@freebsd.net -PERL_CONFIGURE= YES - -MAN3= Ace::Sequence::Feature.3 \ - Ace::Sequence.3 \ - Ace.3 \ - Ace::Sequence::FeatureList.3 \ - Ace::Sequence::Multi.3 \ - Ace::Sequence::Homol.3 \ - Ace::Object.3 \ - Ace::Local.3 \ - Ace::Iterator.3 \ - Ace::Model.3 +PERL_CONFIGURE= yes +MAN3= Ace.3 Ace::Browser::AceSubs.3 Ace::Graphics::Fk.3 \ + Ace::Graphics::Glyph.3 Ace::Graphics::Glyph::anchored_arrow.3 \ + Ace::Graphics::Glyph::arrow.3 Ace::Graphics::Glyph::group.3 \ + Ace::Graphics::Glyph::line.3 Ace::Graphics::Glyph::primers.3 \ + Ace::Graphics::Glyph::segments.3 \ + Ace::Graphics::Glyph::transcript.3 \ + Ace::Graphics::GlyphFactory.3 Ace::Graphics::Panel.3 \ + Ace::Graphics::Track.3 Ace::Iterator.3 Ace::Local.3 \ + Ace::Model.3 Ace::Object.3 Ace::Sequence.3 \ + Ace::Sequence::Feature.3 Ace::Sequence::FeatureList.3 \ + Ace::Sequence::GappedAlignment.3 Ace::Sequence::Homol.3 \ + Ace::Sequence::Multi.3 Ace::Sequence::Transcript.3 MANPREFIX= ${PREFIX}/lib/perl5/${PERL_VERSION} post-patch: diff --git a/biology/p5-AcePerl/distinfo b/biology/p5-AcePerl/distinfo index 9576df0586fd..1878c8c7ce91 100644 --- a/biology/p5-AcePerl/distinfo +++ b/biology/p5-AcePerl/distinfo @@ -1 +1 @@ -MD5 (AcePerl-1.67.tar.gz) = 46c9bc547f4c8e73480ddac7cbf79d95 +MD5 (AcePerl-1.70.tar.gz) = f2ab51ce6c4aa7abc0136abd55f486b6 diff --git a/biology/p5-AcePerl/pkg-comment b/biology/p5-AcePerl/pkg-comment index ff9627c37254..a93e81fd7380 100644 --- a/biology/p5-AcePerl/pkg-comment +++ b/biology/p5-AcePerl/pkg-comment @@ -1 +1 @@ -Perl interface to the ACEDB genome database system +Perl5 interface to the ACEDB genome database system diff --git a/biology/p5-AcePerl/pkg-descr b/biology/p5-AcePerl/pkg-descr index 766e14953e2a..ae6708977e75 100644 --- a/biology/p5-AcePerl/pkg-descr +++ b/biology/p5-AcePerl/pkg-descr @@ -3,7 +3,7 @@ system. It provides functionality for connecting to remote ACEDB databases, performing queries, fetching ACE objects, and updating databases. Author: Lincoln D. Stein -WWW: http://stein.cshl.org/AcePerl/ +WWW: http://stein.cshl.org/AcePerl/ Port maintained by the FreeBSD bio-porters mailing list. diff --git a/biology/p5-AcePerl/pkg-plist b/biology/p5-AcePerl/pkg-plist index 52e905370a94..723b0fcbdec5 100644 --- a/biology/p5-AcePerl/pkg-plist +++ b/biology/p5-AcePerl/pkg-plist @@ -1,15 +1,34 @@ lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Browser/AceSubs.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Browser/SearchSubs.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Browser/SiteDefs.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Browser/TreeSubs.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Freesubs.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Fk.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/anchored_arrow.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/arrow.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/group.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/line.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/primers.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/segments.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph/transcript.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/GlyphFactory.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Panel.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Track.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Iterator.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Local.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Model.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Object.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Object/Wormbase.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/RPC.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/Feature.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/FeatureList.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/GappedAlignment.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/Homol.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/Multi.pm +lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence/Transcript.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/SocketServer.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/GFF/Filehandle.pm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/auto/Ace/.packlist @@ -83,4 +102,8 @@ lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/auto/Ace/timestamps.al @dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/auto/Ace @dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/GFF @dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Sequence +@dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Object +@dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics/Glyph +@dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Graphics +@dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace/Browser @dirrm lib/perl5/site_perl/%%PERL_VER%%/%%PERL_ARCH%%/Ace -- cgit v1.2.3