From 47dea29df882c392eb6d643610e85f81303c8683 Mon Sep 17 00:00:00 2001 From: Wen Heping Date: Tue, 29 Dec 2009 13:39:14 +0000 Subject: python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees) reader for python. WWW: http://simon.net.nz/articles/python-nexus --- biology/python-nexus/Makefile | 19 +++++++++++++++++++ biology/python-nexus/distinfo | 3 +++ biology/python-nexus/pkg-descr | 4 ++++ biology/python-nexus/pkg-plist | 8 ++++++++ 4 files changed, 34 insertions(+) create mode 100644 biology/python-nexus/Makefile create mode 100644 biology/python-nexus/distinfo create mode 100644 biology/python-nexus/pkg-descr create mode 100644 biology/python-nexus/pkg-plist (limited to 'biology/python-nexus') diff --git a/biology/python-nexus/Makefile b/biology/python-nexus/Makefile new file mode 100644 index 000000000000..dc7b19c63936 --- /dev/null +++ b/biology/python-nexus/Makefile @@ -0,0 +1,19 @@ +# Ports collection makefile for: python-nexus +# Date created: 29 Dec, 2009 +# Whom: Wen Heping +# +# $FreeBSD$ +# + +PORTNAME= python-nexus +PORTVERSION= 0.6d +CATEGORIES= biology python +MASTER_SITES= CHEESESHOP + +MAINTAINER= wen@FreeBSD.org +COMMENT= A generic nexus file format reader for python + +USE_PYTHON= yes +USE_PYDISTUTILS= easy_install + +.include diff --git a/biology/python-nexus/distinfo b/biology/python-nexus/distinfo new file mode 100644 index 000000000000..ac019c537935 --- /dev/null +++ b/biology/python-nexus/distinfo @@ -0,0 +1,3 @@ +MD5 (python-nexus-0.6d.tar.gz) = 79b804e6165823c9b09651c9c318eb30 +SHA256 (python-nexus-0.6d.tar.gz) = 2290c35a02879c8f91047638274dd659dc08c694eca2dbdbd7d1907c891c2718 +SIZE (python-nexus-0.6d.tar.gz) = 22899 diff --git a/biology/python-nexus/pkg-descr b/biology/python-nexus/pkg-descr new file mode 100644 index 000000000000..dfb734c054ac --- /dev/null +++ b/biology/python-nexus/pkg-descr @@ -0,0 +1,4 @@ +python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees) +reader for python. + +WWW: http://simon.net.nz/articles/python-nexus diff --git a/biology/python-nexus/pkg-plist b/biology/python-nexus/pkg-plist new file mode 100644 index 000000000000..423f2df09b1e --- /dev/null +++ b/biology/python-nexus/pkg-plist @@ -0,0 +1,8 @@ +bin/nexus_randomise.py +bin/nexus_calc_missings.py +bin/nexus_remove_uniquechars.py +bin/nexus_deinterleave.py +bin/nexus_detranslate.py +bin/nexus_remove_constantchars.py +bin/nexus_combine_nexus.py +%%PYTHON_SITELIBDIR%%/%%PYEASYINSTALL_EGG%% -- cgit v1.3