From a28c9784b3fabcc5d63fdbd2bfeb2f9505f886a3 Mon Sep 17 00:00:00 2001 From: Pawel Pekala Date: Tue, 16 Dec 2014 22:10:23 +0000 Subject: - Upadate biology/mopac to version 1.15 - Bump affected ports - Switch ports to new mastersite, add LICENSE - Reformat ports pkg descriptions PR: 194493 Submitted by: tkato432@yahoo.com --- biology/mopac/Makefile | 24 ++++++++++-------------- biology/mopac/distinfo | 4 ++-- biology/mopac/files/patch-libmopac7.pc.in | 8 -------- biology/mopac/files/patch-src__Makefile.am | 12 ------------ biology/mopac/pkg-descr | 6 +++--- biology/mopac/pkg-plist | 4 ++-- 6 files changed, 17 insertions(+), 41 deletions(-) delete mode 100644 biology/mopac/files/patch-libmopac7.pc.in delete mode 100644 biology/mopac/files/patch-src__Makefile.am (limited to 'biology') diff --git a/biology/mopac/Makefile b/biology/mopac/Makefile index 5353c55c318f..874ec12fb655 100644 --- a/biology/mopac/Makefile +++ b/biology/mopac/Makefile @@ -3,35 +3,32 @@ PORTNAME= mopac PORTVERSION= 7.${MOPAC_SUBVERSION} -PORTREVISION= 4 PORTEPOCH= 1 CATEGORIES= biology -MASTER_SITES= SF/${PORTNAME}7/${PORTNAME}7/${PORTNAME}7-1.00 -DISTNAME= ${PORTNAME}7-${MOPAC_SUBVERSION} +MASTER_SITES= http://bioinformatics.org/ghemical/download/%SUBDIR%/ +MASTER_SITE_SUBDIR= release20111012 current +DISTNAME= mopac7-${MOPAC_SUBVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Semi-empirical (MNDO, etc.) molecular orbital calculation -LIB_DEPENDS= libf2c.so:${PORTSDIR}/lang/f2c +LICENSE= GPLv2 # (or later) -USES= gmake libtool -USE_AUTOTOOLS= aclocal automake autoconf libtoolize -ACLOCAL_ARGS= -I ${LOCALBASE}/share/aclocal -AUTOMAKE_ARGS= --add-missing --copy +USES= fortran gmake libtool pathfix +GNU_CONFIGURE= yes +INSTALL_TARGET= install-strip USE_LDCONFIG= yes CPPFLAGS+= -I${LOCALBASE}/include LDFLAGS+= -L${LOCALBASE}/lib -MOPAC_SUBVERSION= 1.11 - PORTEXAMPLES= * OPTIONS_DEFINE= EXAMPLES +MOPAC_SUBVERSION= 1.15 + post-patch: - @${REINPLACE_CMD} -e '/pkgconfig/s|$$(libdir)|$$(prefix)/libdata|g' \ - ${WRKSRC}/Makefile.am @${REINPLACE_CMD} -e '/usage/s|run_||g' \ -e 's|./src/mopac7|${PREFIX}/libexec/mopac7|g' \ ${WRKSRC}/run_${PORTNAME}7 @@ -39,10 +36,9 @@ post-patch: post-install: ${INSTALL_SCRIPT} ${WRKSRC}/run_${PORTNAME}7 \ ${STAGEDIR}${PREFIX}/bin/${PORTNAME}7 - ${INSTALL_PROGRAM} ${WRKSRC}/src/.libs/${PORTNAME}7 \ + ${INSTALL_PROGRAM} ${WRKSRC}/fortran/.libs/${PORTNAME}7 \ ${STAGEDIR}${PREFIX}/libexec/${PORTNAME}7 @${MKDIR} ${STAGEDIR}${EXAMPLESDIR}/test ${INSTALL_DATA} ${WRKSRC}/tests/*.dat ${STAGEDIR}${EXAMPLESDIR}/test - @${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libmopac7.so.0 .include diff --git a/biology/mopac/distinfo b/biology/mopac/distinfo index 9bbb21d1a394..c602dce61834 100644 --- a/biology/mopac/distinfo +++ b/biology/mopac/distinfo @@ -1,2 +1,2 @@ -SHA256 (mopac7-1.11.tar.gz) = 56dd55fc7e00e74095200b67aed1e9f0d06daa5b71dccdf944b5de5830d31921 -SIZE (mopac7-1.11.tar.gz) = 1157353 +SHA256 (mopac7-1.15.tar.gz) = 6d7ac5d78522db70f7794fd816cea32829cfa9e93774202fe80ba5a54375fbaa +SIZE (mopac7-1.15.tar.gz) = 764547 diff --git a/biology/mopac/files/patch-libmopac7.pc.in b/biology/mopac/files/patch-libmopac7.pc.in deleted file mode 100644 index e2b84132222c..000000000000 --- a/biology/mopac/files/patch-libmopac7.pc.in +++ /dev/null @@ -1,8 +0,0 @@ ---- libmopac7.pc.in~ 2003-12-19 22:14:28.000000000 +0900 -+++ libmopac7.pc.in 2008-08-23 07:09:51.000000000 +0900 -@@ -4,4 +4,4 @@ - Name: libmopac7 - Description: A library for semi-empirical QM calculations. - Version: @VERSION@ --Libs: -L${libdir} -lmopac7 -+Libs: -L${libdir} -lmopac7 -lf2c diff --git a/biology/mopac/files/patch-src__Makefile.am b/biology/mopac/files/patch-src__Makefile.am deleted file mode 100644 index 04d54e8406d3..000000000000 --- a/biology/mopac/files/patch-src__Makefile.am +++ /dev/null @@ -1,12 +0,0 @@ ---- src/Makefile.am.orig 2005-08-22 20:06:45.000000000 +0900 -+++ src/Makefile.am 2009-12-17 03:23:46.000000000 +0900 -@@ -42,7 +42,8 @@ - if HAVE_F2C - noinst_PROGRAMS = mopac7 - mopac7_SOURCES = mopac7app.c --mopac7_LDFLAGS = -lmopac7 -lf2c -lm -+mopac7_LDADD = libmopac7.la -+mopac7_LDFLAGS = -lf2c -lm - else - # the executable is not built! - # so nothing here... diff --git a/biology/mopac/pkg-descr b/biology/mopac/pkg-descr index 77a5813124e7..ebe8b3e0d5c5 100644 --- a/biology/mopac/pkg-descr +++ b/biology/mopac/pkg-descr @@ -1,4 +1,4 @@ -MOPAC7, semi-empirical (MNDO, AM1, PM3, MINDO/3) -quantum-chemical calculation written by James J. P. Stewart and co-workers. +MOPAC7, semi-empirical (MNDO, AM1, PM3, MINDO/3) quantum-chemical +calculation written by James J. P. Stewart and co-workers. -WWW: http://sourceforge.net/projects/mopac7/ +WWW: http://bioinformatics.org/ghemical/ diff --git a/biology/mopac/pkg-plist b/biology/mopac/pkg-plist index baebca125ddf..662c639fbc56 100644 --- a/biology/mopac/pkg-plist +++ b/biology/mopac/pkg-plist @@ -2,7 +2,7 @@ bin/mopac7 include/mopac7/libmopac7.h lib/libmopac7.a lib/libmopac7.so -lib/libmopac7.so.0 -lib/libmopac7.so.0.0.0 +lib/libmopac7.so.1 +lib/libmopac7.so.1.0.13 libdata/pkgconfig/libmopac7.pc libexec/mopac7 -- cgit v1.2.3